RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 AEBP2Q6ZN18 517 aaPredicted RBP33.1■■■□□ 2.89
GNPTAB-208ENST00000550718 CHIC1Q5VXU3 224 aa31.89■■■□□ 2.7
GNPTAB-208ENST00000550718 SENP3Q9H4L4 574 aaPredicted RBP28.29■■■□□ 2.12
GNPTAB-208ENST00000550718 PHF23Q9BUL5 403 aaPredicted RBP27.93■■■□□ 2.06
GNPTAB-208ENST00000550718 FOXD1Q16676 465 aa26.24■■□□□ 1.79
GNPTAB-208ENST00000550718 PLPPR3Q6T4P5 718 aa25.69■■□□□ 1.7
GNPTAB-208ENST00000550718 PPP6R1Q9UPN7 881 aa24.79■■□□□ 1.56
GNPTAB-208ENST00000550718 ADRA2BP18089 450 aa24.71■■□□□ 1.55
GNPTAB-208ENST00000550718 PIAS4Q8N2W9 510 aaPredicted RBP24.6■■□□□ 1.53
GNPTAB-208ENST00000550718 MSH5O43196 834 aa24.51■■□□□ 1.51
GNPTAB-208ENST00000550718 POTEDQ86YR6 584 aa23.47■■□□□ 1.35
GNPTAB-208ENST00000550718 SCAF1Q9H7N4 1312 aaKnown RBP22.79■■□□□ 1.24
GNPTAB-208ENST00000550718 MAPK8IP2Q13387 824 aaPredicted RBP22.56■■□□□ 1.2
GNPTAB-208ENST00000550718 PPP4R3CPQ6ZMV5 832 aa22.51■■□□□ 1.19
GNPTAB-208ENST00000550718 DMRT2Q9Y5R5 561 aa22.48■■□□□ 1.19
GNPTAB-208ENST00000550718 CNKSR2Q8WXI2 1034 aa22.06■■□□□ 1.12
GNPTAB-208ENST00000550718 HOXD11P31277 338 aaPredicted RBP21.84■■□□□ 1.09
GNPTAB-208ENST00000550718 NCBP3Q53F19 620 aaKnown RBP21.83■■□□□ 1.09
GNPTAB-208ENST00000550718 RNF216Q9NWF9 866 aaPredicted RBP21.77■■□□□ 1.08
GNPTAB-208ENST00000550718 NPM3O75607 178 aaKnown RBP21.44■■□□□ 1.02
GNPTAB-208ENST00000550718 DCAF8L1A6NGE4 600 aa21.38■■□□□ 1.01
GNPTAB-208ENST00000550718 KCNA4P22459 653 aa21.32■■□□□ 1
GNPTAB-208ENST00000550718 DNAJC5BQ9UF47 199 aa21.15■□□□□ 0.98
GNPTAB-208ENST00000550718 RNF39Q9H2S5 420 aa20.92■□□□□ 0.94
GNPTAB-208ENST00000550718 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.71■□□□□ 0.91
GNPTAB-208ENST00000550718 CACNB1Q02641 598 aaPredicted RBP20.7■□□□□ 0.9
GNPTAB-208ENST00000550718 C1QBPQ07021 282 aaKnown RBP20.69■□□□□ 0.9
GNPTAB-208ENST00000550718 SLC4A2P04920 1241 aa20.37■□□□□ 0.85
GNPTAB-208ENST00000550718 U3KPZ7 1027 aaPredicted RBP20.33■□□□□ 0.85
GNPTAB-208ENST00000550718 SLC4A1APQ9BWU0 796 aaKnown RBP20.24■□□□□ 0.83
GNPTAB-208ENST00000550718 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.02■□□□□ 0.8
GNPTAB-208ENST00000550718 HNRNPUL2Q1KMD3 747 aaKnown RBP20.02■□□□□ 0.8
GNPTAB-208ENST00000550718 APLP2Q06481 763 aa19.94■□□□□ 0.78
GNPTAB-208ENST00000550718 SAMD1Q6SPF0 538 aaPredicted RBP19.89■□□□□ 0.77
GNPTAB-208ENST00000550718 MYCNP04198 464 aaPredicted RBP19.88■□□□□ 0.77
GNPTAB-208ENST00000550718 SPINK5Q9NQ38 1064 aaPredicted RBP19.87■□□□□ 0.77
GNPTAB-208ENST00000550718 FOXD4L1Q9NU39 408 aa19.85■□□□□ 0.77
GNPTAB-208ENST00000550718 CAPN15O75808 1086 aa19.83■□□□□ 0.77
GNPTAB-208ENST00000550718 ZNF219Q9P2Y4 722 aaPredicted RBP19.7■□□□□ 0.74
GNPTAB-208ENST00000550718 DSG3P32926 999 aa19.69■□□□□ 0.74
GNPTAB-208ENST00000550718 ZBTB22O15209 634 aa19.6■□□□□ 0.73
GNPTAB-208ENST00000550718 TRHP20396 242 aaPredicted RBP19.58■□□□□ 0.72
GNPTAB-208ENST00000550718 ABCB7O75027 752 aa19.35■□□□□ 0.69
GNPTAB-208ENST00000550718 ATXN8OSP0DMR3 200 aa19.31■□□□□ 0.68
GNPTAB-208ENST00000550718 ATF5Q9Y2D1 282 aaPredicted RBP19.26■□□□□ 0.67
GNPTAB-208ENST00000550718 POLA2Q14181 598 aa19.2■□□□□ 0.66
GNPTAB-208ENST00000550718 CSRNP3Q8WYN3 585 aa19.07■□□□□ 0.64
GNPTAB-208ENST00000550718 ZBTB12Q9Y330 459 aaPredicted RBP18.97■□□□□ 0.63
GNPTAB-208ENST00000550718 EHMT2Q96KQ7 1210 aa18.93■□□□□ 0.62
GNPTAB-208ENST00000550718 RBM42Q9BTD8 480 aaKnown RBP18.86■□□□□ 0.61
GNPTAB-208ENST00000550718 FBLN2P98095 1184 aa18.59■□□□□ 0.57
GNPTAB-208ENST00000550718 OSCARQ8IYS5 282 aa18.53■□□□□ 0.56
GNPTAB-208ENST00000550718 AKT1S1Q96B36 256 aa18.48■□□□□ 0.55
GNPTAB-208ENST00000550718 MKRN4PQ13434 485 aaPredicted RBP18.45■□□□□ 0.54
GNPTAB-208ENST00000550718 SPDYE2BA6NHP3 402 aa18.38■□□□□ 0.53
GNPTAB-208ENST00000550718 SPDYE6P0CI01 402 aa18.38■□□□□ 0.53
GNPTAB-208ENST00000550718 SPDYE2Q495Y8 402 aa18.38■□□□□ 0.53
GNPTAB-208ENST00000550718 POTEHQ6S545 545 aa18.25■□□□□ 0.51
GNPTAB-208ENST00000550718 REM2Q8IYK8 340 aaPredicted RBP18.24■□□□□ 0.51
GNPTAB-208ENST00000550718 CHRDL2Q6WN34 429 aa18.22■□□□□ 0.51
GNPTAB-208ENST00000550718 SSUH2Q9Y2M2 353 aa18.16■□□□□ 0.5
GNPTAB-208ENST00000550718 ZNF692Q9BU19 519 aaPredicted RBP18.15■□□□□ 0.5
GNPTAB-208ENST00000550718 PITPNM1O00562 1244 aa18.02■□□□□ 0.48
GNPTAB-208ENST00000550718 SPDYE1Q8NFV5 336 aaPredicted RBP17.94■□□□□ 0.46
GNPTAB-208ENST00000550718 PABPN1Q86U42 306 aaKnown RBP eCLIP17.87■□□□□ 0.45
GNPTAB-208ENST00000550718 FXR2P51116 673 aaKnown RBP eCLIP17.85■□□□□ 0.45
GNPTAB-208ENST00000550718 PIP4P2Q8N4L2 257 aa17.84■□□□□ 0.45
GNPTAB-208ENST00000550718 SPDYE4A6NLX3 237 aa17.79■□□□□ 0.44
GNPTAB-208ENST00000550718 CLEC11AQ9Y240 323 aa17.78■□□□□ 0.44
GNPTAB-208ENST00000550718 PRR29P0C7W0 189 aa17.6■□□□□ 0.41
GNPTAB-208ENST00000550718 STAG3Q9UJ98 1225 aa17.58■□□□□ 0.4
GNPTAB-208ENST00000550718 PRKAR2AP13861 404 aaKnown RBP17.56■□□□□ 0.4
GNPTAB-208ENST00000550718 PROM2Q8N271 834 aa17.52■□□□□ 0.4
GNPTAB-208ENST00000550718 HAX1O00165 279 aa17.39■□□□□ 0.37
GNPTAB-208ENST00000550718 CHADLQ6NUI6 762 aa17.37■□□□□ 0.37
GNPTAB-208ENST00000550718 SP7Q8TDD2 431 aaPredicted RBP17.3■□□□□ 0.36
GNPTAB-208ENST00000550718 C19orf67A6NJJ6 358 aa17.26■□□□□ 0.35
GNPTAB-208ENST00000550718 FARP1Q9Y4F1 1045 aaPredicted RBP17.26■□□□□ 0.35
GNPTAB-208ENST00000550718 CREBZFQ9NS37 354 aa17.25■□□□□ 0.35
GNPTAB-208ENST00000550718 FKBP8Q14318 412 aa17.23■□□□□ 0.35
GNPTAB-208ENST00000550718 EVX2Q03828 476 aa17.16■□□□□ 0.34
GNPTAB-208ENST00000550718 MNX1P50219 401 aaPredicted RBP17.04■□□□□ 0.32
GNPTAB-208ENST00000550718 CD44P16070 742 aaKnown RBP17.03■□□□□ 0.32
GNPTAB-208ENST00000550718 NPM1P06748 294 aaKnown RBP eCLIP17.01■□□□□ 0.31
GNPTAB-208ENST00000550718 PLEKHG5O94827 1062 aa16.94■□□□□ 0.3
GNPTAB-208ENST00000550718 CLCN6P51797 869 aa16.94■□□□□ 0.3
GNPTAB-208ENST00000550718 FBXO3Q9UK99 471 aa16.92■□□□□ 0.3
GNPTAB-208ENST00000550718 MIER1Q8N108 512 aa16.91■□□□□ 0.3
GNPTAB-208ENST00000550718 GABBR2O75899 941 aa16.86■□□□□ 0.29
GNPTAB-208ENST00000550718 PAK3O75914 559 aaPredicted RBP16.85■□□□□ 0.29
GNPTAB-208ENST00000550718 ZNF579Q8NAF0 562 aaKnown RBP16.85■□□□□ 0.29
GNPTAB-208ENST00000550718 ZRANB1Q9UGI0 708 aa16.83■□□□□ 0.28
GNPTAB-208ENST00000550718 PLCD3Q8N3E9 789 aa16.82■□□□□ 0.28
GNPTAB-208ENST00000550718 ZBTB47Q9UFB7 747 aaPredicted RBP16.8■□□□□ 0.28
GNPTAB-208ENST00000550718 VASPP50552 380 aaPredicted RBP16.62■□□□□ 0.25
GNPTAB-208ENST00000550718 PHF12Q96QT6 1004 aa16.59■□□□□ 0.25
GNPTAB-208ENST00000550718 TSPYL2Q9H2G4 693 aaPredicted RBP16.59■□□□□ 0.25
GNPTAB-208ENST00000550718 CCDC61Q9Y6R9 512 aa16.59■□□□□ 0.25
GNPTAB-208ENST00000550718 RASEFQ8IZ41 740 aa16.58■□□□□ 0.24
GNPTAB-208ENST00000550718 NUBP1P53384 320 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms