RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 ARID5BQ14865 1188 aa17.88■□□□□ 0.45
CNN3-207ENST00000545882 CCDC73Q6ZRK6 1079 aa17.88■□□□□ 0.45
CNN3-207ENST00000545882 TOM1L2Q6ZVM7 507 aa17.88■□□□□ 0.45
CNN3-207ENST00000545882 FSIP1Q8NA03 581 aa17.88■□□□□ 0.45
CNN3-207ENST00000545882 SLAIN2Q9P270 581 aa17.88■□□□□ 0.45
CNN3-207ENST00000545882 PCDHA7Q9UN72 937 aa17.88■□□□□ 0.45
CNN3-207ENST00000545882 ISCA1Q9BUE6 129 aa17.88■□□□□ 0.45
CNN3-207ENST00000545882 CARD10Q9BWT7 1032 aa17.88■□□□□ 0.45
CNN3-207ENST00000545882 GOLGA6L19H0YKK7 550 aa17.87■□□□□ 0.45
CNN3-207ENST00000545882 OTUD7BQ6GQQ9 843 aa17.87■□□□□ 0.45
CNN3-207ENST00000545882 LRRC8AQ8IWT6 810 aa17.87■□□□□ 0.45
CNN3-207ENST00000545882 FMR1NBQ8N0W7 255 aaPredicted RBP17.87■□□□□ 0.45
CNN3-207ENST00000545882 ERCC4Q92889 916 aaPredicted RBP17.87■□□□□ 0.45
CNN3-207ENST00000545882 C16orf45Q96MC5 204 aaPredicted RBP17.87■□□□□ 0.45
CNN3-207ENST00000545882 RTEL1Q9NZ71 1219 aa17.87■□□□□ 0.45
CNN3-207ENST00000545882 KINO60870 393 aaKnown RBP17.86■□□□□ 0.45
CNN3-207ENST00000545882 ME1P48163 572 aa17.86■□□□□ 0.45
CNN3-207ENST00000545882 HAND2P61296 217 aa17.86■□□□□ 0.45
CNN3-207ENST00000545882 FKBP4Q02790 459 aaKnown RBP eCLIP17.86■□□□□ 0.45
CNN3-207ENST00000545882 SCARF1Q14162 830 aa17.86■□□□□ 0.45
CNN3-207ENST00000545882 MB21D2Q8IYB1 491 aaPredicted RBP17.86■□□□□ 0.45
CNN3-207ENST00000545882 XAGE2Q96GT9 111 aa17.86■□□□□ 0.45
CNN3-207ENST00000545882 CEP126Q9P2H0 1117 aa17.86■□□□□ 0.45
CNN3-207ENST00000545882 HPS5Q9UPZ3 1129 aa17.86■□□□□ 0.45
CNN3-207ENST00000545882 ECM29Q5VYK3 1845 aa17.86■□□□□ 0.45
CNN3-207ENST00000545882 IL2RBP14784 551 aa17.86■□□□□ 0.45
CNN3-207ENST00000545882 ANTXR2P58335 489 aa17.86■□□□□ 0.45
CNN3-207ENST00000545882 ANO10Q9NW15 660 aa17.86■□□□□ 0.45
CNN3-207ENST00000545882 NEDD4P46934 1319 aa17.85■□□□□ 0.45
CNN3-207ENST00000545882 ZNF335Q9H4Z2 1342 aaPredicted RBP17.85■□□□□ 0.45
CNN3-207ENST00000545882 FGAP02671 866 aa17.85■□□□□ 0.45
CNN3-207ENST00000545882 TNNT1P13805 278 aa17.85■□□□□ 0.45
CNN3-207ENST00000545882 ADALQ6DHV7 355 aa17.85■□□□□ 0.45
CNN3-207ENST00000545882 CLIC4Q9Y696 253 aa17.85■□□□□ 0.45
CNN3-207ENST00000545882 SMTNL1A8MU46 457 aa17.84■□□□□ 0.45
CNN3-207ENST00000545882 RBM6P78332 1123 aaKnown RBP17.84■□□□□ 0.45
CNN3-207ENST00000545882 ATP2B3Q16720 1220 aa17.84■□□□□ 0.45
CNN3-207ENST00000545882 SMAP1Q8IYB5 467 aaPredicted RBP17.84■□□□□ 0.45
CNN3-207ENST00000545882 LINC00301Q8NCQ3 95 aa17.84■□□□□ 0.45
CNN3-207ENST00000545882 MRPS27Q92552 414 aaKnown RBP17.84■□□□□ 0.45
CNN3-207ENST00000545882 A0A1B0GVL5 298 aa17.84■□□□□ 0.45
CNN3-207ENST00000545882 A0A1W2PQ27 194 aa17.84■□□□□ 0.45
CNN3-207ENST00000545882 A0A1W2PQ64 194 aa17.84■□□□□ 0.45
CNN3-207ENST00000545882 A0A1W2PQD8 194 aa17.84■□□□□ 0.45
CNN3-207ENST00000545882 PPP4R3BQ5MIZ7 849 aa17.84■□□□□ 0.45
CNN3-207ENST00000545882 TTC39AQ5SRH9 613 aa17.84■□□□□ 0.45
CNN3-207ENST00000545882 PUS7LQ9H0K6 701 aaKnown RBP17.84■□□□□ 0.45
CNN3-207ENST00000545882 CTNNA3Q9UI47 895 aa17.84■□□□□ 0.45
CNN3-207ENST00000545882 USP27XA6NNY8 438 aa17.83■□□□□ 0.44
CNN3-207ENST00000545882 PRC1O43663 620 aa17.83■□□□□ 0.44
CNN3-207ENST00000545882 ZAP70P43403 619 aa17.83■□□□□ 0.44
CNN3-207ENST00000545882 NDUFA8P51970 172 aa17.83■□□□□ 0.44
CNN3-207ENST00000545882 TCIRG1Q13488 830 aa17.83■□□□□ 0.44
CNN3-207ENST00000545882 HSP90AB3PQ58FF7 597 aa17.83■□□□□ 0.44
CNN3-207ENST00000545882 CCDC158Q5M9N0 1113 aa17.83■□□□□ 0.44
CNN3-207ENST00000545882 GJB4Q9NTQ9 266 aa17.83■□□□□ 0.44
CNN3-207ENST00000545882 CCZ1BP86790 482 aa17.82■□□□□ 0.44
CNN3-207ENST00000545882 CCZ1P86791 482 aaPredicted RBP17.82■□□□□ 0.44
CNN3-207ENST00000545882 NCBP1Q09161 790 aaKnown RBP17.82■□□□□ 0.44
CNN3-207ENST00000545882 IMMTQ16891 758 aaKnown RBP17.82■□□□□ 0.44
CNN3-207ENST00000545882 WASHC4Q2M389 1173 aa17.82■□□□□ 0.44
CNN3-207ENST00000545882 PDCL2Q8N4E4 241 aa17.82■□□□□ 0.44
CNN3-207ENST00000545882 AOPEPQ8N6M6 819 aa17.82■□□□□ 0.44
CNN3-207ENST00000545882 FBXO18Q8NFZ0 1043 aa17.82■□□□□ 0.44
CNN3-207ENST00000545882 CHMP4CQ96CF2 233 aa17.82■□□□□ 0.44
CNN3-207ENST00000545882 KLF18A0A0U1RQI7 1052 aa17.82■□□□□ 0.44
CNN3-207ENST00000545882 BECN2A8MW95 431 aa17.82■□□□□ 0.44
CNN3-207ENST00000545882 KIF28PB7ZC32 967 aa17.82■□□□□ 0.44
CNN3-207ENST00000545882 ZFYP08048 801 aaPredicted RBP17.82■□□□□ 0.44
CNN3-207ENST00000545882 TPD52L1Q16890 204 aaPredicted RBP17.82■□□□□ 0.44
CNN3-207ENST00000545882 CCDC57Q2TAC2 916 aa17.82■□□□□ 0.44
CNN3-207ENST00000545882 PI16Q6UXB8 463 aa17.82■□□□□ 0.44
CNN3-207ENST00000545882 RAB11FIP4Q86YS3 637 aa17.82■□□□□ 0.44
CNN3-207ENST00000545882 NKX2-3Q8TAU0 364 aa17.82■□□□□ 0.44
CNN3-207ENST00000545882 APPBP2Q92624 585 aa17.82■□□□□ 0.44
CNN3-207ENST00000545882 FBXO3Q9UK99 471 aa17.82■□□□□ 0.44
CNN3-207ENST00000545882 PRDM4Q9UKN5 801 aa17.82■□□□□ 0.44
CNN3-207ENST00000545882 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.81■□□□□ 0.44
CNN3-207ENST00000545882 RIC1Q4ADV7 1423 aa17.81■□□□□ 0.44
CNN3-207ENST00000545882 MYH3P11055 1940 aa17.81■□□□□ 0.44
CNN3-207ENST00000545882 POLR3DP05423 398 aaPredicted RBP17.81■□□□□ 0.44
CNN3-207ENST00000545882 NBPF11Q86T75 865 aa17.81■□□□□ 0.44
CNN3-207ENST00000545882 CEP57L1Q8IYX8 460 aa17.81■□□□□ 0.44
CNN3-207ENST00000545882 C8orf76Q96K31 380 aa17.81■□□□□ 0.44
CNN3-207ENST00000545882 PKNOX2Q96KN3 472 aa17.81■□□□□ 0.44
CNN3-207ENST00000545882 CCDC85AQ96PX6 553 aaPredicted RBP17.81■□□□□ 0.44
CNN3-207ENST00000545882 NBPF3Q9H094 633 aa17.81■□□□□ 0.44
CNN3-207ENST00000545882 POLR3EQ9NVU0 708 aa17.81■□□□□ 0.44
CNN3-207ENST00000545882 AKAP2Q9Y2D5 859 aa17.81■□□□□ 0.44
CNN3-207ENST00000545882 CCDC69A6NI79 296 aa17.8■□□□□ 0.44
CNN3-207ENST00000545882 NEMFO60524 1076 aa17.8■□□□□ 0.44
CNN3-207ENST00000545882 CSF1RP07333 972 aa17.8■□□□□ 0.44
CNN3-207ENST00000545882 GORABQ5T7V8 394 aa17.8■□□□□ 0.44
CNN3-207ENST00000545882 MYSM1Q5VVJ2 828 aa17.8■□□□□ 0.44
CNN3-207ENST00000545882 PLA2G12BQ9BX93 195 aa17.8■□□□□ 0.44
CNN3-207ENST00000545882 ORC3Q9UBD5 711 aaPredicted RBP17.8■□□□□ 0.44
CNN3-207ENST00000545882 GOLGA8BA8MQT2 603 aa17.8■□□□□ 0.44
CNN3-207ENST00000545882 YEATS4O95619 227 aa17.8■□□□□ 0.44
CNN3-207ENST00000545882 TRIM28Q13263 835 aaKnown RBP17.8■□□□□ 0.44
CNN3-207ENST00000545882 STK38Q15208 465 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms