RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 TBKBP1A7MCY6 615 aa5.9□□□□□ -1.46
UBE4A-203ENST00000545354 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.9□□□□□ -1.46
UBE4A-203ENST00000545354 ATP8B1O43520 1251 aa5.9□□□□□ -1.46
UBE4A-203ENST00000545354 PRPF40AO75400 957 aaKnown RBP5.9□□□□□ -1.46
UBE4A-203ENST00000545354 VIL1P09327 827 aaKnown RBP5.9□□□□□ -1.46
UBE4A-203ENST00000545354 SEPT2Q15019 361 aa5.9□□□□□ -1.46
UBE4A-203ENST00000545354 SUZ12Q15022 739 aaKnown RBP5.9□□□□□ -1.46
UBE4A-203ENST00000545354 SYT10Q6XYQ8 523 aa5.9□□□□□ -1.46
UBE4A-203ENST00000545354 PARP9Q8IXQ6 854 aa5.9□□□□□ -1.46
UBE4A-203ENST00000545354 CCDC89Q8N998 374 aa5.9□□□□□ -1.46
UBE4A-203ENST00000545354 PTCD2Q8WV60 388 aaKnown RBP5.9□□□□□ -1.46
UBE4A-203ENST00000545354 HS3ST6Q96QI5 342 aa5.9□□□□□ -1.46
UBE4A-203ENST00000545354 DUSP9Q99956 384 aaKnown RBP5.9□□□□□ -1.46
UBE4A-203ENST00000545354 TCHPQ9BT92 498 aa5.9□□□□□ -1.46
UBE4A-203ENST00000545354 TRMT1Q9NXH9 659 aaKnown RBP5.9□□□□□ -1.46
UBE4A-203ENST00000545354 KLF15Q9UIH9 416 aa5.9□□□□□ -1.46
UBE4A-203ENST00000545354 SSX2IPQ9Y2D8 614 aa5.9□□□□□ -1.46
UBE4A-203ENST00000545354 TBX4P57082 545 aa5.9□□□□□ -1.47
UBE4A-203ENST00000545354 ALDH1L2Q3SY69 923 aa5.9□□□□□ -1.47
UBE4A-203ENST00000545354 MYSM1Q5VVJ2 828 aa5.9□□□□□ -1.47
UBE4A-203ENST00000545354 NAA16Q6N069 864 aaPredicted RBP5.9□□□□□ -1.47
UBE4A-203ENST00000545354 CPLX2Q6PUV4 134 aaKnown RBP5.9□□□□□ -1.47
UBE4A-203ENST00000545354 ARMC9Q7Z3E5 817 aa5.9□□□□□ -1.47
UBE4A-203ENST00000545354 WDR63Q8IWG1 891 aa5.9□□□□□ -1.47
UBE4A-203ENST00000545354 CHMP7Q8WUX9 453 aaPredicted RBP5.9□□□□□ -1.47
UBE4A-203ENST00000545354 KHSRPQ92945 711 aaKnown RBP eCLIP5.9□□□□□ -1.47
UBE4A-203ENST00000545354 SAAL1Q96ER3 474 aa5.9□□□□□ -1.47
UBE4A-203ENST00000545354 RBM33Q96EV2 1170 aaKnown RBP5.9□□□□□ -1.47
UBE4A-203ENST00000545354 YIPF2Q9BWQ6 316 aa5.9□□□□□ -1.47
UBE4A-203ENST00000545354 ALDH8A1Q9H2A2 487 aaPredicted RBP5.9□□□□□ -1.47
UBE4A-203ENST00000545354 GINM1Q9NU53 330 aa5.9□□□□□ -1.47
UBE4A-203ENST00000545354 IL20Q9NYY1 176 aa5.9□□□□□ -1.47
UBE4A-203ENST00000545354 SLC30A1Q9Y6M5 507 aa5.9□□□□□ -1.47
UBE4A-203ENST00000545354 BRD4O60885 1362 aaPredicted RBP5.9□□□□□ -1.47
UBE4A-203ENST00000545354 GOLGA8AA7E2F4 631 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 TMEM232C9JQI7 657 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 ATG7O95352 703 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 MYL1P05976 194 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 PSMA3P25788 255 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 USP11P51784 963 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 TUBA1BP68363 451 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 IKQ13123 557 aaPredicted RBP5.89□□□□□ -1.47
UBE4A-203ENST00000545354 ARHGEF6Q15052 776 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 LRRC23Q53EV4 343 aaPredicted RBP5.89□□□□□ -1.47
UBE4A-203ENST00000545354 ANKRD45Q5TZF3 282 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 ISM2Q6H9L7 571 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 PACS1Q6VY07 963 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 TUBA1AQ71U36 451 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 NT5DC4Q86YG4 428 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 APLFQ8IW19 511 aaPredicted RBP5.89□□□□□ -1.47
UBE4A-203ENST00000545354 MFN1Q8IWA4 741 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 CCDC170Q8IYT3 715 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 AFAP1Q8N556 730 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 ZNF397Q8NF99 534 aaPredicted RBP5.89□□□□□ -1.47
UBE4A-203ENST00000545354 N4BP2L2Q92802 583 aaPredicted RBP5.89□□□□□ -1.47
UBE4A-203ENST00000545354 PPP1R14BQ96C90 147 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 KIF1BPQ96EK5 621 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 BRINP2Q9C0B6 783 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 PDGFDQ9GZP0 370 aaPredicted RBP5.89□□□□□ -1.47
UBE4A-203ENST00000545354 KRT82Q9NSB4 513 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 ARGLU1Q9NWB6 273 aaPredicted RBP5.89□□□□□ -1.47
UBE4A-203ENST00000545354 ROCK1Q13464 1354 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 SYNJ1O43426 1573 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 WRNQ14191 1432 aaPredicted RBP eCLIP5.89□□□□□ -1.47
UBE4A-203ENST00000545354 AKNAQ7Z591 1439 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 DNMBPQ6XZF7 1577 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 POLA1P09884 1462 aaPredicted RBP5.89□□□□□ -1.47
UBE4A-203ENST00000545354 A0A087WUV0 522 aaPredicted RBP5.89□□□□□ -1.47
UBE4A-203ENST00000545354 PRC1O43663 620 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 SMARCA1P28370 1054 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 SLC8A3P57103 927 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 NUCB1Q02818 461 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 MFSD10Q14728 455 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 TAF11Q15544 211 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 BOLA3Q53S33 107 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 SH2D4BQ5SQS7 431 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 PPP1R15BQ5SWA1 713 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 AGAP9Q5VTM2 703 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 KIAA1958Q8N8K9 716 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 CCDC150Q8NCX0 1101 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 EZH1Q92800 747 aaPredicted RBP5.89□□□□□ -1.47
UBE4A-203ENST00000545354 RBM17Q96I25 401 aaKnown RBP5.89□□□□□ -1.47
UBE4A-203ENST00000545354 ZMAT2Q96NC0 199 aaKnown RBP5.89□□□□□ -1.47
UBE4A-203ENST00000545354 LNPKQ9C0E8 428 aa5.89□□□□□ -1.47
UBE4A-203ENST00000545354 SMG6Q86US8 1419 aaKnown RBP5.88□□□□□ -1.47
UBE4A-203ENST00000545354 IQCA1LA6NCM1 817 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 GOLGA6L4A6NEF3 574 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 SGTAO43765 313 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 RPN1P04843 607 aaKnown RBP5.88□□□□□ -1.47
UBE4A-203ENST00000545354 LMNB1P20700 586 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 PAPOLAP51003 745 aaKnown RBP5.88□□□□□ -1.47
UBE4A-203ENST00000545354 EVA1CP58658 441 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 PDE4BQ07343 736 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 DDR1Q08345 913 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 ADCY1Q08828 1119 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 RCN1Q15293 331 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 CCDC38Q502W7 563 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 RCSD1Q6JBY9 416 aa5.88□□□□□ -1.47
UBE4A-203ENST00000545354 CLASRPQ8N2M8 674 aaKnown RBP5.88□□□□□ -1.47
UBE4A-203ENST00000545354 SMYD1Q8NB12 490 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms