RNA–Protein interactions for RNA: ENST00000543631.5

SPARCL1-210, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-210ENST00000543631 HTATSF1O43719 755 aaKnown RBP6.5□□□□□ -1.37
SPARCL1-210ENST00000543631 CCDC125Q86Z20 511 aa6.5□□□□□ -1.37
SPARCL1-210ENST00000543631 AEBP1Q8IUX7 1158 aa6.5□□□□□ -1.37
SPARCL1-210ENST00000543631 STRN4Q9NRL3 753 aa6.5□□□□□ -1.37
SPARCL1-210ENST00000543631 MKL2Q9ULH7 1088 aa6.5□□□□□ -1.37
SPARCL1-210ENST00000543631 SPG7Q9UQ90 795 aa6.5□□□□□ -1.37
SPARCL1-210ENST00000543631 ABCA3Q99758 1704 aa6.5□□□□□ -1.37
SPARCL1-210ENST00000543631 CRYBG1Q9Y4K1 1723 aa6.5□□□□□ -1.37
SPARCL1-210ENST00000543631 KAT6BQ8WYB5 2073 aa6.49□□□□□ -1.37
SPARCL1-210ENST00000543631 KDRP35968 1356 aa6.49□□□□□ -1.37
SPARCL1-210ENST00000543631 CT47B1P0C2W7 299 aaPredicted RBP6.49□□□□□ -1.37
SPARCL1-210ENST00000543631 NBPF6Q5VWK0 638 aa6.49□□□□□ -1.37
SPARCL1-210ENST00000543631 ALYREFQ86V81 257 aaKnown RBP6.49□□□□□ -1.37
SPARCL1-210ENST00000543631 USHBP1Q8N6Y0 703 aa6.49□□□□□ -1.37
SPARCL1-210ENST00000543631 EDARADDQ8WWZ3 215 aa6.49□□□□□ -1.37
SPARCL1-210ENST00000543631 PHACTR3Q96KR7 559 aa6.49□□□□□ -1.37
SPARCL1-210ENST00000543631 NBPF4Q96M43 638 aa6.49□□□□□ -1.37
SPARCL1-210ENST00000543631 ESYT1Q9BSJ8 1104 aa6.49□□□□□ -1.37
SPARCL1-210ENST00000543631 CHMP4AQ9BY43 222 aa6.49□□□□□ -1.37
SPARCL1-210ENST00000543631 GPAMQ9HCL2 828 aa6.49□□□□□ -1.37
SPARCL1-210ENST00000543631 NSFL1CQ9UNZ2 370 aaKnown RBP6.49□□□□□ -1.37
SPARCL1-210ENST00000543631 COL14A1Q05707 1796 aaKnown RBP6.49□□□□□ -1.37
SPARCL1-210ENST00000543631 ZNF521Q96K83 1311 aa6.49□□□□□ -1.37
SPARCL1-210ENST00000543631 VIRMAQ69YN4 1812 aaKnown RBP6.48□□□□□ -1.37
SPARCL1-210ENST00000543631 HSP90AB1P08238 724 aaKnown RBP6.48□□□□□ -1.37
SPARCL1-210ENST00000543631 CENPCQ03188 943 aa6.48□□□□□ -1.37
SPARCL1-210ENST00000543631 TEFQ10587 303 aa6.48□□□□□ -1.37
SPARCL1-210ENST00000543631 MTHFSDQ2M296 383 aaKnown RBP6.48□□□□□ -1.37
SPARCL1-210ENST00000543631 AKAP4Q5JQC9 854 aa6.48□□□□□ -1.37
SPARCL1-210ENST00000543631 MEX3CQ5U5Q3 659 aaKnown RBP6.48□□□□□ -1.37
SPARCL1-210ENST00000543631 DUSP27Q5VZP5 1158 aa6.48□□□□□ -1.37
SPARCL1-210ENST00000543631 ZNF530Q6P9A1 599 aaPredicted RBP6.48□□□□□ -1.37
SPARCL1-210ENST00000543631 CNKSR1Q969H4 720 aa6.48□□□□□ -1.37
SPARCL1-210ENST00000543631 IFT57Q9NWB7 429 aa6.48□□□□□ -1.37
SPARCL1-210ENST00000543631 CCDC9Q9Y3X0 531 aaKnown RBP6.48□□□□□ -1.37
SPARCL1-210ENST00000543631 PCDHB11Q9Y5F2 797 aa6.48□□□□□ -1.37
SPARCL1-210ENST00000543631 WDR17Q8IZU2 1322 aa6.48□□□□□ -1.37
SPARCL1-210ENST00000543631 PARP4Q9UKK3 1724 aaKnown RBP6.47□□□□□ -1.37
SPARCL1-210ENST00000543631 COL22A1Q8NFW1 1626 aaPredicted RBP6.47□□□□□ -1.37
SPARCL1-210ENST00000543631 MAP3K5Q99683 1374 aa6.47□□□□□ -1.37
SPARCL1-210ENST00000543631 JCADQ9P266 1359 aa6.47□□□□□ -1.37
SPARCL1-210ENST00000543631 COL18A1P39060 1754 aa6.47□□□□□ -1.37
SPARCL1-210ENST00000543631 GNRH1P01148 92 aa6.47□□□□□ -1.37
SPARCL1-210ENST00000543631 NR1H3Q13133 447 aa6.47□□□□□ -1.37
SPARCL1-210ENST00000543631 RNF20Q5VTR2 975 aa6.47□□□□□ -1.37
SPARCL1-210ENST00000543631 ERICH6BQ5W0A0 696 aa6.47□□□□□ -1.37
SPARCL1-210ENST00000543631 SLCO4C1Q6ZQN7 724 aa6.47□□□□□ -1.37
SPARCL1-210ENST00000543631 CD163Q86VB7 1156 aa6.47□□□□□ -1.37
SPARCL1-210ENST00000543631 CDCA7Q9BWT1 371 aaPredicted RBP6.47□□□□□ -1.37
SPARCL1-210ENST00000543631 BTG4Q9NY30 223 aa6.47□□□□□ -1.37
SPARCL1-210ENST00000543631 GDF2Q9UK05 429 aaPredicted RBP6.47□□□□□ -1.37
SPARCL1-210ENST00000543631 COL16A1Q07092 1604 aaPredicted RBP6.47□□□□□ -1.37
SPARCL1-210ENST00000543631 PLEKHG2Q9H7P9 1386 aa6.46□□□□□ -1.37
SPARCL1-210ENST00000543631 LMO7Q8WWI1 1683 aa6.46□□□□□ -1.37
SPARCL1-210ENST00000543631 A0A1B0GTH6 734 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 C1QTNF9BB2RNN3 333 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 BNIP3LO60238 219 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 IL2RBP14784 551 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 CHRNA4P43681 627 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 PHKA2P46019 1235 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 DGKGP49619 791 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 CTBSQ01459 385 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 C4orf17Q53FE4 359 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 MCM10Q7L590 875 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 IFNL2Q8IZJ0 200 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 GOLGA6L1Q8N7Z2 621 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 ZNF428Q96B54 188 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 XAGE2Q96GT9 111 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 CCDC85AQ96PX6 553 aaPredicted RBP6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 PSMG3-AS1Q96PY0 264 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 CARD10Q9BWT7 1032 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 GOPCQ9HD26 462 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 DNAAF2Q9NVR5 837 aaKnown RBP6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 USP35Q9P2H5 1018 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 TSPYL4Q9UJ04 414 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 SPATA31A6Q5VVP1 1343 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 FANCIQ9NVI1 1328 aa6.46□□□□□ -1.38
SPARCL1-210ENST00000543631 CAMTA1Q9Y6Y1 1673 aa6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 CRB1P82279 1406 aa6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 NCAPD2Q15021 1401 aa6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 FAM83GA6ND36 823 aa6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 IPO8O15397 1037 aaKnown RBP6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 MSX1P28360 303 aa6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 RRP1P56182 461 aaKnown RBP6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 EXOSC9Q06265 439 aaKnown RBP6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 DCTN1Q14203 1278 aa6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 LBRQ14739 615 aaKnown RBP6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 TAF7Q15545 349 aaPredicted RBP6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 TMEM259Q4ZIN3 620 aa6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 TRMT2AQ8IZ69 625 aaKnown RBP6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 FRAT1Q92837 279 aaPredicted RBP6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 TSR2Q969E8 191 aaKnown RBP6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 ABHD17AQ96GS6 310 aa6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 NGLY1Q96IV0 654 aa6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 THUMPD2Q9BTF0 503 aaKnown RBP6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 RUBCNLQ9H714 662 aa6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 SMC4Q9NTJ3 1288 aa6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 BABAM1Q9NWV8 329 aa6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 GGA1Q9UJY5 639 aa6.45□□□□□ -1.38
SPARCL1-210ENST00000543631 CACNA1FO60840 1977 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms