RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 FAM71BQ8TC56 605 aa6.38□□□□□ -1.39
CSMD1-215ENST00000537824 MED4Q9NPJ6 270 aa6.38□□□□□ -1.39
CSMD1-215ENST00000537824 UBXN1Q04323 297 aa6.38□□□□□ -1.39
CSMD1-215ENST00000537824 IFT88Q13099 833 aa6.38□□□□□ -1.39
CSMD1-215ENST00000537824 TSGA10Q9BZW7 698 aa6.38□□□□□ -1.39
CSMD1-215ENST00000537824 ARHGEF17Q96PE2 2063 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-215ENST00000537824 NCAPD3P42695 1498 aa6.38□□□□□ -1.39
CSMD1-215ENST00000537824 DOPEY2Q9Y3R5 2298 aa6.38□□□□□ -1.39
CSMD1-215ENST00000537824 NSD3Q9BZ95 1437 aa6.38□□□□□ -1.39
CSMD1-215ENST00000537824 CCDC82Q8N4S0 544 aa6.38□□□□□ -1.39
CSMD1-215ENST00000537824 IRX5P78411 483 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-215ENST00000537824 PPP1R9BQ96SB3 815 aa6.38□□□□□ -1.39
CSMD1-215ENST00000537824 ESPL1Q14674 2120 aa6.38□□□□□ -1.39
CSMD1-215ENST00000537824 PSMD6Q15008 389 aa6.38□□□□□ -1.39
CSMD1-215ENST00000537824 CNGA4Q8IV77 575 aa6.38□□□□□ -1.39
CSMD1-215ENST00000537824 TEX2Q8IWB9 1127 aa6.38□□□□□ -1.39
CSMD1-215ENST00000537824 IGSF22Q8N9C0 903 aa6.38□□□□□ -1.39
CSMD1-215ENST00000537824 JAKMIP2Q96AA8 810 aa6.38□□□□□ -1.39
CSMD1-215ENST00000537824 CCDC42Q96M95 316 aa6.38□□□□□ -1.39
CSMD1-215ENST00000537824 KRT71Q3SY84 523 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 RPGRIP1LQ68CZ1 1315 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 CFAP157Q5JU67 520 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 MICU3Q86XE3 530 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 SEC63Q9UGP8 760 aaKnown RBP6.37□□□□□ -1.39
CSMD1-215ENST00000537824 TTC19Q6DKK2 380 aaPredicted RBP6.37□□□□□ -1.39
CSMD1-215ENST00000537824 SMARCA4P51532 1647 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 SMARCC2Q8TAQ2 1214 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 ABCC11Q96J66 1382 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 PLVAPQ9BX97 442 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 SLC12A7Q9Y666 1083 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 ARAP1Q96P48 1450 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 NUTM2GQ5VZR2 741 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 SULT6B1Q6IMI4 303 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 ZSCAN25Q6NSZ9 544 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 LMBRD1Q9NUN5 540 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 SAMM50Q9Y512 469 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 FCHSD2O94868 740 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 UBA7P41226 1012 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 BRF1Q92994 677 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 DDX21Q9NR30 783 aaKnown RBP eCLIP6.37□□□□□ -1.39
CSMD1-215ENST00000537824 STRN4Q9NRL3 753 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 ERCC6Q03468 1493 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 A0A087WUV0 522 aaPredicted RBP6.37□□□□□ -1.39
CSMD1-215ENST00000537824 PPFIA2O75334 1257 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 HDAC1Q13547 482 aaPredicted RBP6.37□□□□□ -1.39
CSMD1-215ENST00000537824 PPP1R7Q15435 360 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 NFE2L2Q16236 605 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 KLHDC4Q8TBB5 520 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 RMND1Q9NWS8 449 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 ELP1O95163 1332 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 GADD45BO75293 160 aaPredicted RBP6.37□□□□□ -1.39
CSMD1-215ENST00000537824 HSPA1LP34931 641 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 TMEM266Q2M3C6 531 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 RASIP1Q5U651 963 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 DENND2CQ68D51 928 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 KIF6Q6ZMV9 814 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 SECISBP2LQ93073 1101 aaKnown RBP6.37□□□□□ -1.39
CSMD1-215ENST00000537824 COMMD10Q9Y6G5 202 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 MPHOSPH8Q99549 860 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 SUFUQ9UMX1 484 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 KIF1CO43896 1103 aaKnown RBP6.37□□□□□ -1.39
CSMD1-215ENST00000537824 STAT6P42226 847 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 C8orf74Q6P047 294 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 KLHL34Q8N239 644 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 CAPS2Q9BXY5 557 aa6.37□□□□□ -1.39
CSMD1-215ENST00000537824 GOLGA8AA7E2F4 631 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 USP5P45974 858 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 GSTA5Q7RTV2 222 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 TSC22D3Q99576 134 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 MIS18AQ9NYP9 233 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 NCOA2Q15596 1464 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 EEF2P13639 858 aaKnown RBP6.36□□□□□ -1.39
CSMD1-215ENST00000537824 TCEANC2Q96MN5 208 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 SPAG5Q96R06 1193 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 CTNND2Q9UQB3 1225 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 CFTRP13569 1480 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 MAGEA9P43362 315 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 STX17P56962 302 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 FANCCQ00597 558 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 UAP1Q16222 522 aaPredicted RBP6.36□□□□□ -1.39
CSMD1-215ENST00000537824 LARSQ9P2J5 1176 aaKnown RBP6.36□□□□□ -1.39
CSMD1-215ENST00000537824 hCG_2014768A0A024R1R8 64 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 RPAP2Q8IXW5 612 aaPredicted RBP6.36□□□□□ -1.39
CSMD1-215ENST00000537824 LMBR1Q8WVP7 490 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 KIAA1107Q9UPP5 1409 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 ATP5DP30049 168 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 CETN1Q12798 172 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 SPATS2Q86XZ4 545 aaKnown RBP6.36□□□□□ -1.39
CSMD1-215ENST00000537824 STMN1P16949 149 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 PHLDB3Q6NSJ2 640 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 RUFY4Q6ZNE9 571 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 RGS22Q8NE09 1264 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 PRPHP41219 470 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 CCDC141Q6ZP82 1450 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 HAND2P61296 217 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 PAK2Q13177 524 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 IQCA1Q86XH1 822 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 PYM1Q9BRP8 204 aaKnown RBP6.36□□□□□ -1.39
CSMD1-215ENST00000537824 AKAP2Q9Y2D5 859 aa6.36□□□□□ -1.39
CSMD1-215ENST00000537824 PPFIA4O75335 1185 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms