RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 MTX1Q13505 466 aa9.71□□□□□ -0.85
ABCA4-207ENST00000536513 OSBP2Q969R2 916 aa9.71□□□□□ -0.85
ABCA4-207ENST00000536513 CYP2D7A0A087X1C5 515 aa9.71□□□□□ -0.86
ABCA4-207ENST00000536513 RANBP6O60518 1105 aaKnown RBP9.71□□□□□ -0.86
ABCA4-207ENST00000536513 ATP5JP18859 108 aa9.71□□□□□ -0.86
ABCA4-207ENST00000536513 CASP7P55210 303 aa9.71□□□□□ -0.86
ABCA4-207ENST00000536513 PICALMQ13492 652 aa9.71□□□□□ -0.86
ABCA4-207ENST00000536513 KBTBD3Q8NAB2 608 aa9.71□□□□□ -0.86
ABCA4-207ENST00000536513 AATFQ9NY61 560 aaKnown RBP eCLIP9.71□□□□□ -0.86
ABCA4-207ENST00000536513 SCAF8Q9UPN6 1271 aaKnown RBP9.71□□□□□ -0.86
ABCA4-207ENST00000536513 BCL9LQ86UU0 1499 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 GPAA1O43292 621 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 CTDSPL2Q05D32 466 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 RASGRF1Q13972 1273 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 CSPP1Q1MSJ5 1256 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 ZNF34Q8IZ26 560 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 TNPO1Q92973 898 aaKnown RBP9.7□□□□□ -0.86
ABCA4-207ENST00000536513 STAP2Q9UGK3 403 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 NARFQ9UHQ1 456 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 SLC4A4Q9Y6R1 1079 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 RGPD1P0DJD0 1748 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 RNF113AO15541 343 aaKnown RBP9.7□□□□□ -0.86
ABCA4-207ENST00000536513 CHRNA5P30532 468 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 TNNT3P45378 269 aaPredicted RBP9.7□□□□□ -0.86
ABCA4-207ENST00000536513 APOBRQ0VD83 1088 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 TXNRD3Q86VQ6 643 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 MICU3Q86XE3 530 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 SPATA5Q8NB90 893 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 PIH1D3Q9NQM4 214 aaKnown RBP9.7□□□□□ -0.86
ABCA4-207ENST00000536513 PARP3Q9Y6F1 533 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 ALS2Q96Q42 1657 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 M0R2C6 588 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 HIP1O00291 1037 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 ZNF213O14771 459 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 DRC7Q8IY82 874 aa9.7□□□□□ -0.86
ABCA4-207ENST00000536513 CWC22Q9HCG8 908 aaKnown RBP9.7□□□□□ -0.86
ABCA4-207ENST00000536513 GOLGA6L4A6NEF3 574 aa9.69□□□□□ -0.86
ABCA4-207ENST00000536513 ERVV-1B6SEH8 477 aa9.69□□□□□ -0.86
ABCA4-207ENST00000536513 SLC27A2O14975 620 aa9.69□□□□□ -0.86
ABCA4-207ENST00000536513 DIXDC1Q155Q3 683 aa9.69□□□□□ -0.86
ABCA4-207ENST00000536513 RABL6Q3YEC7 729 aaPredicted RBP9.69□□□□□ -0.86
ABCA4-207ENST00000536513 Q6ZUG5 572 aa9.69□□□□□ -0.86
ABCA4-207ENST00000536513 CMTR1Q8N1G2 835 aaKnown RBP9.69□□□□□ -0.86
ABCA4-207ENST00000536513 LPIN2Q92539 896 aa9.69□□□□□ -0.86
ABCA4-207ENST00000536513 KIF2CQ99661 725 aa9.69□□□□□ -0.86
ABCA4-207ENST00000536513 TFIP11Q9UBB9 837 aaKnown RBP9.69□□□□□ -0.86
ABCA4-207ENST00000536513 SAP30BPQ9UHR5 308 aaKnown RBP9.69□□□□□ -0.86
ABCA4-207ENST00000536513 DENND2AQ9ULE3 1009 aa9.69□□□□□ -0.86
ABCA4-207ENST00000536513 TNS2Q63HR2 1409 aa9.69□□□□□ -0.86
ABCA4-207ENST00000536513 NTSR2O95665 410 aa9.69□□□□□ -0.86
ABCA4-207ENST00000536513 CYP2E1P05181 493 aaPredicted RBP9.69□□□□□ -0.86
ABCA4-207ENST00000536513 MTERF4Q7Z6M4 381 aaKnown RBP9.69□□□□□ -0.86
ABCA4-207ENST00000536513 ZSCAN29Q8IWY8 852 aaPredicted RBP9.69□□□□□ -0.86
ABCA4-207ENST00000536513 NEK1Q96PY6 1258 aa9.69□□□□□ -0.86
ABCA4-207ENST00000536513 OSBPL3Q9H4L5 887 aa9.69□□□□□ -0.86
ABCA4-207ENST00000536513 HMG20BQ9P0W2 317 aa9.69□□□□□ -0.86
ABCA4-207ENST00000536513 hCG_1642624A0A1W2PR95 340 aa9.69□□□□□ -0.86
ABCA4-207ENST00000536513 DHX16O60231 1041 aaKnown RBP9.69□□□□□ -0.86
ABCA4-207ENST00000536513 LARGE1O95461 756 aa9.69□□□□□ -0.86
ABCA4-207ENST00000536513 SCNN1DP51172 638 aa9.69□□□□□ -0.86
ABCA4-207ENST00000536513 DYNLL1P63167 89 aaKnown RBP9.69□□□□□ -0.86
ABCA4-207ENST00000536513 NYXQ9GZU5 481 aa9.69□□□□□ -0.86
ABCA4-207ENST00000536513 XIRP1Q702N8 1843 aaKnown RBP9.68□□□□□ -0.86
ABCA4-207ENST00000536513 B4E1Z4 1266 aa9.68□□□□□ -0.86
ABCA4-207ENST00000536513 VASPP50552 380 aaPredicted RBP9.68□□□□□ -0.86
ABCA4-207ENST00000536513 IMMTQ16891 758 aaKnown RBP9.68□□□□□ -0.86
ABCA4-207ENST00000536513 RBM26Q5T8P6 1007 aaKnown RBP9.68□□□□□ -0.86
ABCA4-207ENST00000536513 OTUD7BQ6GQQ9 843 aa9.68□□□□□ -0.86
ABCA4-207ENST00000536513 HAUS7Q99871 368 aa9.68□□□□□ -0.86
ABCA4-207ENST00000536513 MXD3Q9BW11 206 aa9.68□□□□□ -0.86
ABCA4-207ENST00000536513 LSG1Q9H089 658 aaKnown RBP9.68□□□□□ -0.86
ABCA4-207ENST00000536513 RIPOR2Q9Y4F9 1068 aa9.68□□□□□ -0.86
ABCA4-207ENST00000536513 USP5P45974 858 aa9.68□□□□□ -0.86
ABCA4-207ENST00000536513 LRRFIP1Q32MZ4 808 aaKnown RBP9.68□□□□□ -0.86
ABCA4-207ENST00000536513 LARP1BQ659C4 914 aaKnown RBP9.68□□□□□ -0.86
ABCA4-207ENST00000536513 NAA16Q6N069 864 aaPredicted RBP9.68□□□□□ -0.86
ABCA4-207ENST00000536513 DBNDD1Q9H9R9 158 aa9.68□□□□□ -0.86
ABCA4-207ENST00000536513 MINPP1Q9UNW1 487 aa9.68□□□□□ -0.86
ABCA4-207ENST00000536513 PHRF1Q9P1Y6 1649 aaKnown RBP9.68□□□□□ -0.86
ABCA4-207ENST00000536513 PSMA5P28066 241 aa9.68□□□□□ -0.86
ABCA4-207ENST00000536513 PRDX5P30044 214 aa9.68□□□□□ -0.86
ABCA4-207ENST00000536513 HIBADHP31937 336 aaKnown RBP9.68□□□□□ -0.86
ABCA4-207ENST00000536513 NOL10Q9BSC4 688 aaKnown RBP9.68□□□□□ -0.86
ABCA4-207ENST00000536513 BCL2L12Q9HB09 334 aa9.68□□□□□ -0.86
ABCA4-207ENST00000536513 MARF1Q9Y4F3 1742 aaKnown RBP9.67□□□□□ -0.86
ABCA4-207ENST00000536513 SMIM22K7EJ46 135 aa9.67□□□□□ -0.86
ABCA4-207ENST00000536513 CYP21A2P08686 494 aa9.67□□□□□ -0.86
ABCA4-207ENST00000536513 GTF2IP78347 998 aa9.67□□□□□ -0.86
ABCA4-207ENST00000536513 ZNF827Q17R98 1081 aa9.67□□□□□ -0.86
ABCA4-207ENST00000536513 RAD50Q92878 1312 aa9.67□□□□□ -0.86
ABCA4-207ENST00000536513 HSPD1P10809 573 aaKnown RBP9.67□□□□□ -0.86
ABCA4-207ENST00000536513 PDE6AP16499 860 aa9.67□□□□□ -0.86
ABCA4-207ENST00000536513 COL23A1Q86Y22 540 aaPredicted RBP9.67□□□□□ -0.86
ABCA4-207ENST00000536513 LRP6O75581 1613 aa9.67□□□□□ -0.86
ABCA4-207ENST00000536513 MAST3O60307 1309 aa9.67□□□□□ -0.86
ABCA4-207ENST00000536513 FGAP02671 866 aa9.67□□□□□ -0.86
ABCA4-207ENST00000536513 GJB2P29033 226 aa9.67□□□□□ -0.86
ABCA4-207ENST00000536513 PRR5LQ6MZQ0 368 aa9.67□□□□□ -0.86
ABCA4-207ENST00000536513 ZC3H12CQ9C0D7 883 aaKnown RBP9.67□□□□□ -0.86
ABCA4-207ENST00000536513 ABCC12Q96J65 1359 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms