RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 EHD4Q9H223 541 aa6.28□□□□□ -1.4
HIPK3-206ENST00000534262 SRA1Q9HD15 236 aaKnown RBP6.28□□□□□ -1.4
HIPK3-206ENST00000534262 NLRP2Q9NX02 1062 aa6.28□□□□□ -1.4
HIPK3-206ENST00000534262 SOX1O00570 391 aaPredicted RBP6.27□□□□□ -1.41
HIPK3-206ENST00000534262 FSCN2O14926 492 aa6.27□□□□□ -1.41
HIPK3-206ENST00000534262 SELPP16109 830 aa6.27□□□□□ -1.41
HIPK3-206ENST00000534262 ITPKAP23677 461 aa6.27□□□□□ -1.41
HIPK3-206ENST00000534262 GALNT11Q8NCW6 608 aa6.27□□□□□ -1.41
HIPK3-206ENST00000534262 ASAP3Q8TDY4 903 aa6.27□□□□□ -1.41
HIPK3-206ENST00000534262 WNT8BQ93098 351 aa6.27□□□□□ -1.41
HIPK3-206ENST00000534262 LENG1Q96BZ8 264 aaPredicted RBP6.27□□□□□ -1.41
HIPK3-206ENST00000534262 H3BRJ5 948 aa6.26□□□□□ -1.41
HIPK3-206ENST00000534262 GADD45BO75293 160 aaPredicted RBP6.26□□□□□ -1.41
HIPK3-206ENST00000534262 LDHBP07195 334 aaKnown RBP6.26□□□□□ -1.41
HIPK3-206ENST00000534262 CDC25BP30305 580 aa6.26□□□□□ -1.41
HIPK3-206ENST00000534262 CABP4P57796 275 aa6.26□□□□□ -1.41
HIPK3-206ENST00000534262 PTPN12Q05209 780 aaKnown RBP6.26□□□□□ -1.41
HIPK3-206ENST00000534262 PLA2G4EQ3MJ16 856 aa6.26□□□□□ -1.41
HIPK3-206ENST00000534262 EAPPQ56P03 285 aaPredicted RBP6.26□□□□□ -1.41
HIPK3-206ENST00000534262 TXNDC11Q6PKC3 985 aa6.26□□□□□ -1.41
HIPK3-206ENST00000534262 IGF2-ASQ6U949 168 aa6.26□□□□□ -1.41
HIPK3-206ENST00000534262 SHISA2Q6UWI4 295 aa6.26□□□□□ -1.41
HIPK3-206ENST00000534262 FBXO33Q7Z6M2 555 aa6.26□□□□□ -1.41
HIPK3-206ENST00000534262 CD163Q86VB7 1156 aa6.26□□□□□ -1.41
HIPK3-206ENST00000534262 KLHL23Q8NBE8 558 aa6.26□□□□□ -1.41
HIPK3-206ENST00000534262 C8orf37Q96NL8 207 aa6.26□□□□□ -1.41
HIPK3-206ENST00000534262 BCO2Q9BYV7 579 aa6.26□□□□□ -1.41
HIPK3-206ENST00000534262 OSBPL7Q9BZF2 842 aa6.26□□□□□ -1.41
HIPK3-206ENST00000534262 ABCB6Q9NP58 842 aa6.26□□□□□ -1.41
HIPK3-206ENST00000534262 OSGEPQ9NPF4 335 aa6.26□□□□□ -1.41
HIPK3-206ENST00000534262 TRAK1Q9UPV9 953 aa6.26□□□□□ -1.41
HIPK3-206ENST00000534262 TMEM238LA0A1B0GVL6 79 aa6.25□□□□□ -1.41
HIPK3-206ENST00000534262 FAM177BA6PVY3 158 aa6.25□□□□□ -1.41
HIPK3-206ENST00000534262 C1QTNF9BB2RNN3 333 aa6.25□□□□□ -1.41
HIPK3-206ENST00000534262 ESRRAP11474 423 aaPredicted RBP6.25□□□□□ -1.41
HIPK3-206ENST00000534262 TCF3P15923 654 aa6.25□□□□□ -1.41
HIPK3-206ENST00000534262 CHRNA4P43681 627 aa6.25□□□□□ -1.41
HIPK3-206ENST00000534262 PIP4K2BP78356 416 aa6.25□□□□□ -1.41
HIPK3-206ENST00000534262 ZNF423Q2M1K9 1284 aa6.25□□□□□ -1.41
HIPK3-206ENST00000534262 HGSNATQ68CP4 663 aa6.25□□□□□ -1.41
HIPK3-206ENST00000534262 NXPE4Q6UWF7 544 aa6.25□□□□□ -1.41
HIPK3-206ENST00000534262 KLHDC7BQ96G42 594 aa6.25□□□□□ -1.41
HIPK3-206ENST00000534262 USP35Q9P2H5 1018 aa6.25□□□□□ -1.41
HIPK3-206ENST00000534262 C9orf172C9J069 976 aa6.24□□□□□ -1.41
HIPK3-206ENST00000534262 GIPC1O14908 333 aa6.24□□□□□ -1.41
HIPK3-206ENST00000534262 PRPF40AO75400 957 aaKnown RBP6.24□□□□□ -1.41
HIPK3-206ENST00000534262 ATP2B2Q01814 1243 aa6.24□□□□□ -1.41
HIPK3-206ENST00000534262 IKBKEQ14164 716 aa6.24□□□□□ -1.41
HIPK3-206ENST00000534262 FAM117BQ6P1L5 589 aa6.24□□□□□ -1.41
HIPK3-206ENST00000534262 NACC1Q96RE7 527 aa6.24□□□□□ -1.41
HIPK3-206ENST00000534262 CLEC4MQ9H2X3 399 aaPredicted RBP6.24□□□□□ -1.41
HIPK3-206ENST00000534262 SOX17Q9H6I2 414 aaPredicted RBP6.24□□□□□ -1.41
HIPK3-206ENST00000534262 SEC31BQ9NQW1 1179 aa6.24□□□□□ -1.41
HIPK3-206ENST00000534262 RNF19AQ9NV58 838 aa6.24□□□□□ -1.41
HIPK3-206ENST00000534262 PPP4R2Q9NY27 417 aa6.24□□□□□ -1.41
HIPK3-206ENST00000534262 APBA3O96018 575 aa6.23□□□□□ -1.41
HIPK3-206ENST00000534262 CD68P34810 354 aaPredicted RBP6.23□□□□□ -1.41
HIPK3-206ENST00000534262 FGD1P98174 961 aa6.23□□□□□ -1.41
HIPK3-206ENST00000534262 TAGLNQ01995 201 aaKnown RBP6.23□□□□□ -1.41
HIPK3-206ENST00000534262 ADGRE1Q14246 886 aa6.23□□□□□ -1.41
HIPK3-206ENST00000534262 SUZ12Q15022 739 aaKnown RBP6.23□□□□□ -1.41
HIPK3-206ENST00000534262 FOXD4L6Q3SYB3 417 aaPredicted RBP6.23□□□□□ -1.41
HIPK3-206ENST00000534262 FOXD4L3Q6VB84 417 aaPredicted RBP6.23□□□□□ -1.41
HIPK3-206ENST00000534262 TMEM130Q8N3G9 435 aa6.23□□□□□ -1.41
HIPK3-206ENST00000534262 DCAF11Q8TEB1 546 aa6.23□□□□□ -1.41
HIPK3-206ENST00000534262 FRMD6Q96NE9 622 aa6.23□□□□□ -1.41
HIPK3-206ENST00000534262 CARD10Q9BWT7 1032 aa6.23□□□□□ -1.41
HIPK3-206ENST00000534262 BCL2L13Q9BXK5 485 aa6.23□□□□□ -1.41
HIPK3-206ENST00000534262 ZNF576Q9H609 170 aa6.23□□□□□ -1.41
HIPK3-206ENST00000534262 KCNK4Q9NYG8 393 aa6.23□□□□□ -1.41
HIPK3-206ENST00000534262 DDX3YO15523 660 aaKnown RBP6.22□□□□□ -1.41
HIPK3-206ENST00000534262 ADAM11O75078 769 aa6.22□□□□□ -1.41
HIPK3-206ENST00000534262 XRCC5P13010 732 aaKnown RBP6.22□□□□□ -1.41
HIPK3-206ENST00000534262 HSP90B1P14625 803 aaKnown RBP6.22□□□□□ -1.41
HIPK3-206ENST00000534262 NRG1Q02297 640 aaPredicted RBP6.22□□□□□ -1.41
HIPK3-206ENST00000534262 PCDH1Q08174 1060 aa6.22□□□□□ -1.41
HIPK3-206ENST00000534262 C19orf57Q0VDD7 668 aa6.22□□□□□ -1.41
HIPK3-206ENST00000534262 RPS26P11Q5JNZ5 115 aaPredicted RBP6.22□□□□□ -1.41
HIPK3-206ENST00000534262 DUSP9Q99956 384 aaKnown RBP6.22□□□□□ -1.41
HIPK3-206ENST00000534262 SRCIN1Q9C0H9 1055 aa6.22□□□□□ -1.41
HIPK3-206ENST00000534262 ZFYVE1Q9HBF4 777 aa6.22□□□□□ -1.41
HIPK3-206ENST00000534262 B3GALT4O96024 378 aa6.21□□□□□ -1.42
HIPK3-206ENST00000534262 GNA15P30679 374 aa6.21□□□□□ -1.42
HIPK3-206ENST00000534262 FCGRTP55899 365 aa6.21□□□□□ -1.42
HIPK3-206ENST00000534262 FAAP100Q0VG06 881 aa6.21□□□□□ -1.42
HIPK3-206ENST00000534262 MBTPS1Q14703 1052 aa6.21□□□□□ -1.42
HIPK3-206ENST00000534262 C3orf58Q8NDZ4 430 aa6.21□□□□□ -1.42
HIPK3-206ENST00000534262 GIPC2Q8TF65 315 aa6.21□□□□□ -1.42
HIPK3-206ENST00000534262 SLC7A3Q8WY07 619 aa6.21□□□□□ -1.42
HIPK3-206ENST00000534262 MRPL18Q9H0U6 180 aaKnown RBP6.21□□□□□ -1.42
HIPK3-206ENST00000534262 SPG7Q9UQ90 795 aa6.21□□□□□ -1.42
HIPK3-206ENST00000534262 RECKO95980 971 aa6.2□□□□□ -1.42
HIPK3-206ENST00000534262 PROCP04070 461 aa6.2□□□□□ -1.42
HIPK3-206ENST00000534262 HMGB1P09429 215 aaKnown RBP6.2□□□□□ -1.42
HIPK3-206ENST00000534262 ARL4DP49703 201 aa6.2□□□□□ -1.42
HIPK3-206ENST00000534262 DAB2P98082 770 aa6.2□□□□□ -1.42
HIPK3-206ENST00000534262 DTHD1Q6ZMT9 781 aa6.2□□□□□ -1.42
HIPK3-206ENST00000534262 FAM177A1Q8N128 213 aaPredicted RBP6.2□□□□□ -1.42
HIPK3-206ENST00000534262 ANKRD24Q8TF21 1146 aa6.2□□□□□ -1.42
HIPK3-206ENST00000534262 NRSN2Q9GZP1 204 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms