RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 GINS2Q9Y248 185 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 CFTRP13569 1480 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 KRT86O43790 486 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 CAPN2P17655 700 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 ZNF569Q5MCW4 686 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 STIM2Q9P246 746 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 ERCC3P19447 782 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 TMTC2Q8N394 836 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 FAM204AQ9H8W3 233 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 DAPK3O43293 454 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 CHMP2AO43633 222 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 KRT2P35908 639 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 PPARDQ03181 441 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 TTC22Q5TAA0 569 aa16.51■□□□□ 0.23
LRRK1-207ENST00000531270 TMX3Q96JJ7 454 aa16.5■□□□□ 0.23
LRRK1-207ENST00000531270 RXRAP19793 462 aa16.5■□□□□ 0.23
LRRK1-207ENST00000531270 SEL1L2Q5TEA6 688 aa16.5■□□□□ 0.23
LRRK1-207ENST00000531270 GOLGA1Q92805 767 aa16.5■□□□□ 0.23
LRRK1-207ENST00000531270 SAMD15Q9P1V8 674 aa16.5■□□□□ 0.23
LRRK1-207ENST00000531270 MTRF1LQ9UGC7 380 aaKnown RBP16.5■□□□□ 0.23
LRRK1-207ENST00000531270 CIB2O75838 187 aa16.5■□□□□ 0.23
LRRK1-207ENST00000531270 USP48Q86UV5 1035 aa16.5■□□□□ 0.23
LRRK1-207ENST00000531270 GJA3Q9Y6H8 435 aa16.5■□□□□ 0.23
LRRK1-207ENST00000531270 UVSSAQ2YD98 709 aa16.5■□□□□ 0.23
LRRK1-207ENST00000531270 RTL1A6NKG5 1358 aa16.5■□□□□ 0.23
LRRK1-207ENST00000531270 CALCOCO2Q13137 446 aa16.5■□□□□ 0.23
LRRK1-207ENST00000531270 RBM8AQ9Y5S9 174 aaKnown RBP16.5■□□□□ 0.23
LRRK1-207ENST00000531270 TACC3Q9Y6A5 838 aa16.5■□□□□ 0.23
LRRK1-207ENST00000531270 TRIM75PA6NK02 468 aa16.49■□□□□ 0.23
LRRK1-207ENST00000531270 CUL4BQ13620 913 aa16.49■□□□□ 0.23
LRRK1-207ENST00000531270 CHPF2Q9P2E5 772 aa16.49■□□□□ 0.23
LRRK1-207ENST00000531270 IVLP07476 585 aa16.49■□□□□ 0.23
LRRK1-207ENST00000531270 PRPF31Q8WWY3 499 aaKnown RBP16.49■□□□□ 0.23
LRRK1-207ENST00000531270 JDP2Q8WYK2 163 aa16.49■□□□□ 0.23
LRRK1-207ENST00000531270 FNBP1Q96RU3 617 aa16.49■□□□□ 0.23
LRRK1-207ENST00000531270 AFG3L2Q9Y4W6 797 aa16.49■□□□□ 0.23
LRRK1-207ENST00000531270 IGF1RP08069 1367 aa16.49■□□□□ 0.23
LRRK1-207ENST00000531270 RHPN1Q8TCX5 695 aa16.49■□□□□ 0.23
LRRK1-207ENST00000531270 HELBQ8NG08 1087 aaPredicted RBP16.49■□□□□ 0.23
LRRK1-207ENST00000531270 XAGE3Q8WTP9 111 aa16.49■□□□□ 0.23
LRRK1-207ENST00000531270 DACT1Q9NYF0 836 aa16.49■□□□□ 0.23
LRRK1-207ENST00000531270 PIK3R4Q99570 1358 aa16.49■□□□□ 0.23
LRRK1-207ENST00000531270 HGSO14964 777 aaPredicted RBP16.49■□□□□ 0.23
LRRK1-207ENST00000531270 SLC39A6Q13433 755 aa16.49■□□□□ 0.23
LRRK1-207ENST00000531270 STMN2Q93045 179 aa16.49■□□□□ 0.23
LRRK1-207ENST00000531270 SAP30BPQ9UHR5 308 aaKnown RBP16.49■□□□□ 0.23
LRRK1-207ENST00000531270 POLA1P09884 1462 aaPredicted RBP16.48■□□□□ 0.23
LRRK1-207ENST00000531270 WDR44Q5JSH3 913 aa16.48■□□□□ 0.23
LRRK1-207ENST00000531270 CEP85LQ5SZL2 805 aa16.48■□□□□ 0.23
LRRK1-207ENST00000531270 BICDL2A1A5D9 508 aa16.48■□□□□ 0.23
LRRK1-207ENST00000531270 RNASE9P60153 205 aaKnown RBP16.48■□□□□ 0.23
LRRK1-207ENST00000531270 MCMDC2Q4G0Z9 681 aa16.48■□□□□ 0.23
LRRK1-207ENST00000531270 CCDC110Q8TBZ0 833 aa16.48■□□□□ 0.23
LRRK1-207ENST00000531270 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.48■□□□□ 0.235e-13■■■■■ 127.7
LRRK1-207ENST00000531270 FEZ2Q9UHY8 353 aaPredicted RBP16.48■□□□□ 0.23
LRRK1-207ENST00000531270 CCDC169A6NNP5 214 aa16.48■□□□□ 0.23
LRRK1-207ENST00000531270 RAB3GAP1Q15042 981 aa16.48■□□□□ 0.23
LRRK1-207ENST00000531270 INTS8Q75QN2 995 aaKnown RBP16.48■□□□□ 0.23
LRRK1-207ENST00000531270 MAGEB6Q8N7X4 407 aa16.48■□□□□ 0.23
LRRK1-207ENST00000531270 MBIPQ9NS73 344 aa16.48■□□□□ 0.23
LRRK1-207ENST00000531270 KIF21BO75037 1637 aa16.48■□□□□ 0.23
LRRK1-207ENST00000531270 VIMP08670 466 aaKnown RBP16.48■□□□□ 0.23
LRRK1-207ENST00000531270 ZNF526Q8TF50 670 aaPredicted RBP16.48■□□□□ 0.23
LRRK1-207ENST00000531270 NACA2Q9H009 215 aa16.48■□□□□ 0.23
LRRK1-207ENST00000531270 MTUS1Q9ULD2 1270 aa16.48■□□□□ 0.23
LRRK1-207ENST00000531270 NSFL1CQ9UNZ2 370 aaKnown RBP16.48■□□□□ 0.23
LRRK1-207ENST00000531270 ZC3H12CQ9C0D7 883 aaKnown RBP16.47■□□□□ 0.23
LRRK1-207ENST00000531270 CLUL1Q15846 466 aa16.47■□□□□ 0.23
LRRK1-207ENST00000531270 C8orf37Q96NL8 207 aa16.47■□□□□ 0.23
LRRK1-207ENST00000531270 PARP3Q9Y6F1 533 aa16.47■□□□□ 0.23
LRRK1-207ENST00000531270 STX10O60499 249 aa16.47■□□□□ 0.23
LRRK1-207ENST00000531270 DNM1Q05193 864 aaKnown RBP16.47■□□□□ 0.23
LRRK1-207ENST00000531270 CEBPAP49715 358 aaPredicted RBP16.47■□□□□ 0.23
LRRK1-207ENST00000531270 TFCP2L1Q9NZI6 479 aa16.47■□□□□ 0.23
LRRK1-207ENST00000531270 NKTRP30414 1462 aaKnown RBP16.47■□□□□ 0.23
LRRK1-207ENST00000531270 FRMD4BQ9Y2L6 1034 aa16.47■□□□□ 0.23
LRRK1-207ENST00000531270 FMNL3Q8IVF7 1028 aa16.46■□□□□ 0.23
LRRK1-207ENST00000531270 CEP120Q8N960 986 aa16.46■□□□□ 0.23
LRRK1-207ENST00000531270 ZKSCAN3Q9BRR0 538 aa16.46■□□□□ 0.23
LRRK1-207ENST00000531270 SPOPO43791 374 aa16.46■□□□□ 0.23
LRRK1-207ENST00000531270 ZFYP08048 801 aaPredicted RBP16.46■□□□□ 0.23
LRRK1-207ENST00000531270 POLD1P28340 1107 aa16.46■□□□□ 0.23
LRRK1-207ENST00000531270 SLC8A3P57103 927 aa16.46■□□□□ 0.23
LRRK1-207ENST00000531270 LMBR1LQ6UX01 489 aa16.46■□□□□ 0.23
LRRK1-207ENST00000531270 NOLC1Q14978 699 aaKnown RBP eCLIP16.46■□□□□ 0.23
LRRK1-207ENST00000531270 COPS6Q7L5N1 327 aa16.46■□□□□ 0.23
LRRK1-207ENST00000531270 TBC1D31Q96DN5 1066 aa16.46■□□□□ 0.23
LRRK1-207ENST00000531270 NKIRAS1Q9NYS0 192 aa16.46■□□□□ 0.23
LRRK1-207ENST00000531270 FAM170AA1A519 330 aa16.46■□□□□ 0.23
LRRK1-207ENST00000531270 MAEAQ7L5Y9 396 aa16.46■□□□□ 0.23
LRRK1-207ENST00000531270 SPTLC2O15270 562 aa16.46■□□□□ 0.22
LRRK1-207ENST00000531270 HPDP32754 393 aaPredicted RBP16.46■□□□□ 0.22
LRRK1-207ENST00000531270 EP400NLQ6ZTU2 488 aa16.46■□□□□ 0.22
LRRK1-207ENST00000531270 MIPOL1Q8TD10 442 aa16.45■□□□□ 0.22
LRRK1-207ENST00000531270 TRIM6Q9C030 488 aaPredicted RBP16.45■□□□□ 0.22
LRRK1-207ENST00000531270 GPCPD1Q9NPB8 672 aa16.45■□□□□ 0.22
LRRK1-207ENST00000531270 ABCC11Q96J66 1382 aa16.45■□□□□ 0.22
LRRK1-207ENST00000531270 CAVIN2O95810 425 aa16.45■□□□□ 0.22
LRRK1-207ENST00000531270 APOBRQ0VD83 1088 aa16.45■□□□□ 0.22
LRRK1-207ENST00000531270 PPFIBP2Q8ND30 876 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms