RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 ANO6Q4KMQ2 910 aa8.23□□□□□ -1.09
CTNND1-218ENST00000528232 AP1ARQ63HQ0 302 aa8.23□□□□□ -1.09
CTNND1-218ENST00000528232 ATL3Q6DD88 541 aa8.23□□□□□ -1.09
CTNND1-218ENST00000528232 RAB11FIP4Q86YS3 637 aa8.23□□□□□ -1.09
CTNND1-218ENST00000528232 DHX37Q8IY37 1157 aaKnown RBP8.23□□□□□ -1.09
CTNND1-218ENST00000528232 LRRC27Q9C0I9 530 aa8.23□□□□□ -1.09
CTNND1-218ENST00000528232 IRS4O14654 1257 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-218ENST00000528232 CALM1P0DP23 149 aa8.23□□□□□ -1.09
CTNND1-218ENST00000528232 CALM2P0DP24 149 aa8.23□□□□□ -1.09
CTNND1-218ENST00000528232 CALM3P0DP25 149 aa8.23□□□□□ -1.09
CTNND1-218ENST00000528232 SEPT14Q6ZU15 432 aa8.23□□□□□ -1.09
CTNND1-218ENST00000528232 TCEANC2Q96MN5 208 aa8.23□□□□□ -1.09
CTNND1-218ENST00000528232 NUP88Q99567 741 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-218ENST00000528232 HMGB1P1B2RPK0 211 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-218ENST00000528232 DDB1Q16531 1140 aa8.23□□□□□ -1.09
CTNND1-218ENST00000528232 SETDB2Q96T68 719 aa8.23□□□□□ -1.09
CTNND1-218ENST00000528232 MAGEB6P1A0A0J9YX57 407 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 RPS6KB1P23443 525 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 SMC1AQ14683 1233 aaKnown RBP8.22□□□□□ -1.09
CTNND1-218ENST00000528232 TNNI3KQ59H18 835 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 NIP7Q9Y221 180 aaKnown RBP eCLIP8.22□□□□□ -1.09
CTNND1-218ENST00000528232 FPGT-TNNI3KV9GXZ4 949 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 SSH2Q76I76 1423 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 HLA-DOAP06340 250 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 BRAPQ7Z569 592 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 OTUD7AQ8TE49 926 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-218ENST00000528232 NLRP1Q9C000 1473 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 C6orf229H3BNL8 230 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 NAA16Q6N069 864 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-218ENST00000528232 TCHPQ9BT92 498 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 DACT1Q9NYF0 836 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 ZNF521Q96K83 1311 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 MAP2K2P36507 400 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 GNAQP50148 359 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 EIF4A1P60842 406 aaKnown RBP8.22□□□□□ -1.09
CTNND1-218ENST00000528232 SEPT11Q9NVA2 429 aaKnown RBP8.22□□□□□ -1.09
CTNND1-218ENST00000528232 BCORL1Q5H9F3 1711 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 SH2D4BQ5SQS7 431 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 CACNA2D4Q7Z3S7 1137 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 NLRP3Q96P20 1036 aa8.22□□□□□ -1.09
CTNND1-218ENST00000528232 PTPDC1A2A3K4 754 aa8.21□□□□□ -1.09
CTNND1-218ENST00000528232 URI1O94763 535 aaPredicted RBP8.21□□□□□ -1.09
CTNND1-218ENST00000528232 MAP2K1Q02750 393 aaPredicted RBP8.21□□□□□ -1.09
CTNND1-218ENST00000528232 APOBRQ0VD83 1088 aa8.21□□□□□ -1.09
CTNND1-218ENST00000528232 DNAJC21Q5F1R6 531 aaKnown RBP8.21□□□□□ -1.09
CTNND1-218ENST00000528232 LGR6Q9HBX8 967 aa8.21□□□□□ -1.09
CTNND1-218ENST00000528232 SNX14Q9Y5W7 946 aa8.21□□□□□ -1.09
CTNND1-218ENST00000528232 EYA2O00167 538 aa8.21□□□□□ -1.09
CTNND1-218ENST00000528232 EBAG9O00559 213 aa8.21□□□□□ -1.09
CTNND1-218ENST00000528232 SLC27A2O14975 620 aa8.21□□□□□ -1.09
CTNND1-218ENST00000528232 USO1O60763 962 aaKnown RBP8.21□□□□□ -1.09
CTNND1-218ENST00000528232 TSPY3P0CV98 308 aa8.21□□□□□ -1.09
CTNND1-218ENST00000528232 TSPY8P0CW00 308 aa8.21□□□□□ -1.09
CTNND1-218ENST00000528232 SNW1Q13573 536 aaKnown RBP8.21□□□□□ -1.09
CTNND1-218ENST00000528232 ZNF804AQ7Z570 1209 aa8.21□□□□□ -1.09
CTNND1-218ENST00000528232 DAAM2Q86T65 1068 aa8.21□□□□□ -1.09
CTNND1-218ENST00000528232 C16orf45Q96MC5 204 aaPredicted RBP8.21□□□□□ -1.09
CTNND1-218ENST00000528232 CTAGE1Q96RT6 745 aa8.21□□□□□ -1.09
CTNND1-218ENST00000528232 CDCA7Q9BWT1 371 aaPredicted RBP8.21□□□□□ -1.09
CTNND1-218ENST00000528232 SGSM2O43147 1006 aa8.21□□□□□ -1.1
CTNND1-218ENST00000528232 NBPF7P0C2Y1 421 aaPredicted RBP8.21□□□□□ -1.1
CTNND1-218ENST00000528232 KIF4BQ2VIQ3 1234 aa8.21□□□□□ -1.1
CTNND1-218ENST00000528232 CCDC38Q502W7 563 aa8.21□□□□□ -1.1
CTNND1-218ENST00000528232 VPS36Q86VN1 386 aa8.21□□□□□ -1.1
CTNND1-218ENST00000528232 PAF1Q8N7H5 531 aa8.21□□□□□ -1.1
CTNND1-218ENST00000528232 CFAP57Q96MR6 1250 aa8.21□□□□□ -1.1
CTNND1-218ENST00000528232 KDRP35968 1356 aa8.21□□□□□ -1.1
CTNND1-218ENST00000528232 MADDQ8WXG6 1647 aa8.21□□□□□ -1.1
CTNND1-218ENST00000528232 SPTLC2O15270 562 aa8.21□□□□□ -1.1
CTNND1-218ENST00000528232 CCDC175P0C221 793 aa8.21□□□□□ -1.1
CTNND1-218ENST00000528232 UBA7P41226 1012 aa8.21□□□□□ -1.1
CTNND1-218ENST00000528232 PRIM1P49642 420 aaKnown RBP8.21□□□□□ -1.1
CTNND1-218ENST00000528232 RNF187Q5TA31 235 aaPredicted RBP8.21□□□□□ -1.1
CTNND1-218ENST00000528232 ACSBG1Q96GR2 724 aa8.21□□□□□ -1.1
CTNND1-218ENST00000528232 CDK12Q9NYV4 1490 aaPredicted RBP8.21□□□□□ -1.1
CTNND1-218ENST00000528232 MTIF2P46199 727 aaKnown RBP8.2□□□□□ -1.1
CTNND1-218ENST00000528232 TYRO3Q06418 890 aa8.2□□□□□ -1.1
CTNND1-218ENST00000528232 CEP112Q8N8E3 955 aa8.2□□□□□ -1.1
CTNND1-218ENST00000528232 ANKRD2Q9GZV1 360 aa8.2□□□□□ -1.1
CTNND1-218ENST00000528232 PPP1R1BQ9UD71 204 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-218ENST00000528232 PNMA6EA0A0J9YXQ4 647 aa8.2□□□□□ -1.1
CTNND1-218ENST00000528232 CEP135Q66GS9 1140 aa8.2□□□□□ -1.1
CTNND1-218ENST00000528232 LLPHQ9BRT6 129 aaKnown RBP8.2□□□□□ -1.1
CTNND1-218ENST00000528232 TSPOAP1O95153 1857 aa8.2□□□□□ -1.1
CTNND1-218ENST00000528232 LAMC1P11047 1609 aa8.2□□□□□ -1.1
CTNND1-218ENST00000528232 SYT1P21579 422 aa8.2□□□□□ -1.1
CTNND1-218ENST00000528232 DMTNQ08495 405 aa8.2□□□□□ -1.1
CTNND1-218ENST00000528232 RBBP5Q15291 538 aaKnown RBP8.2□□□□□ -1.1
CTNND1-218ENST00000528232 MAGEB6Q8N7X4 407 aa8.2□□□□□ -1.1
CTNND1-218ENST00000528232 SUCLG2Q96I99 432 aa8.2□□□□□ -1.1
CTNND1-218ENST00000528232 ARFGAP3Q9NP61 516 aa8.2□□□□□ -1.1
CTNND1-218ENST00000528232 TRMT1Q9NXH9 659 aaKnown RBP8.2□□□□□ -1.1
CTNND1-218ENST00000528232 PPFIA3O75145 1194 aa8.2□□□□□ -1.1
CTNND1-218ENST00000528232 NBPF11Q86T75 865 aa8.2□□□□□ -1.1
CTNND1-218ENST00000528232 MKRN1Q9UHC7 482 aaKnown RBP8.2□□□□□ -1.1
CTNND1-218ENST00000528232 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.2□□□□□ -1.14e-9■□□□□ 9.9
CTNND1-218ENST00000528232 RNF17Q9BXT8 1623 aaKnown RBP8.2□□□□□ -1.1
CTNND1-218ENST00000528232 METP08581 1390 aa8.2□□□□□ -1.1
CTNND1-218ENST00000528232 UBASH3AP57075 661 aa8.2□□□□□ -1.1
CTNND1-218ENST00000528232 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms