RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 ZNF295-AS1Q8N0V1 137 aa5.18□□□□□ -1.58
CSDE1-209ENST00000525132 CDX2Q99626 313 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-209ENST00000525132 TSEN34Q9BSV6 310 aaKnown RBP5.18□□□□□ -1.58
CSDE1-209ENST00000525132 DOLKQ9UPQ8 538 aa5.18□□□□□ -1.58
CSDE1-209ENST00000525132 PCDHGA11Q9Y5H2 935 aa5.18□□□□□ -1.58
CSDE1-209ENST00000525132 WDFY4Q6ZS81 3184 aa5.18□□□□□ -1.58
CSDE1-209ENST00000525132 CCDC144AA2RUR9 1427 aa5.17□□□□□ -1.58
CSDE1-209ENST00000525132 SNRPBP14678 240 aaKnown RBP5.17□□□□□ -1.58
CSDE1-209ENST00000525132 DPEP1P16444 411 aa5.17□□□□□ -1.58
CSDE1-209ENST00000525132 PTGIRP43119 386 aa5.17□□□□□ -1.58
CSDE1-209ENST00000525132 ID4P47928 161 aa5.17□□□□□ -1.58
CSDE1-209ENST00000525132 RAB15P59190 212 aa5.17□□□□□ -1.58
CSDE1-209ENST00000525132 EAPPQ56P03 285 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-209ENST00000525132 KANK4Q5T7N3 995 aaPredicted RBP5.17□□□□□ -1.58
CSDE1-209ENST00000525132 SYNE4Q8N205 404 aa5.17□□□□□ -1.58
CSDE1-209ENST00000525132 AGBL1Q96MI9 1066 aa5.17□□□□□ -1.58
CSDE1-209ENST00000525132 PPP1R12CQ9BZL4 782 aa5.17□□□□□ -1.58
CSDE1-209ENST00000525132 PLEKHH2Q8IVE3 1493 aa5.17□□□□□ -1.58
CSDE1-209ENST00000525132 USP17L3A6NCW0 530 aa5.16□□□□□ -1.58
CSDE1-209ENST00000525132 USP17L4A6NCW7 530 aa5.16□□□□□ -1.58
CSDE1-209ENST00000525132 PALM3A6NDB9 673 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-209ENST00000525132 WTIPA6NIX2 430 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-209ENST00000525132 SOBPA7XYQ1 873 aa5.16□□□□□ -1.58
CSDE1-209ENST00000525132 IL2RAP01589 272 aa5.16□□□□□ -1.58
CSDE1-209ENST00000525132 TGFB2P61812 414 aa5.16□□□□□ -1.58
CSDE1-209ENST00000525132 CLN3Q13286 438 aa5.16□□□□□ -1.58
CSDE1-209ENST00000525132 NCOA4Q13772 614 aa5.16□□□□□ -1.58
CSDE1-209ENST00000525132 LARP1Q6PKG0 1096 aaKnown RBP5.16□□□□□ -1.58
CSDE1-209ENST00000525132 USP17L2Q6R6M4 530 aa5.16□□□□□ -1.58
CSDE1-209ENST00000525132 USP17L1Q7RTZ2 530 aa5.16□□□□□ -1.58
CSDE1-209ENST00000525132 DCAF5Q96JK2 942 aa5.16□□□□□ -1.58
CSDE1-209ENST00000525132 PURBQ96QR8 312 aaKnown RBP5.16□□□□□ -1.58
CSDE1-209ENST00000525132 DNMT3LQ9UJW3 386 aa5.16□□□□□ -1.58
CSDE1-209ENST00000525132 RBBP6Q7Z6E9 1792 aaKnown RBP5.16□□□□□ -1.58
CSDE1-209ENST00000525132 YTHDC2Q9H6S0 1430 aaKnown RBP5.15□□□□□ -1.58
CSDE1-209ENST00000525132 PTPN13Q12923 2485 aa5.15□□□□□ -1.58
CSDE1-209ENST00000525132 LAMB2P55268 1798 aa5.15□□□□□ -1.58
CSDE1-209ENST00000525132 TMEM229AB2RXF0 380 aa5.15□□□□□ -1.59
CSDE1-209ENST00000525132 ZBTB7BO15156 539 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-209ENST00000525132 GNRH1P01148 92 aa5.15□□□□□ -1.59
CSDE1-209ENST00000525132 SKIP12755 728 aa5.15□□□□□ -1.59
CSDE1-209ENST00000525132 CTSOP43234 321 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-209ENST00000525132 EVA1CP58658 441 aa5.15□□□□□ -1.59
CSDE1-209ENST00000525132 CHRNA2Q15822 529 aa5.15□□□□□ -1.59
CSDE1-209ENST00000525132 CYP2U1Q7Z449 544 aa5.15□□□□□ -1.59
CSDE1-209ENST00000525132 RNF217Q8TC41 542 aa5.15□□□□□ -1.59
CSDE1-209ENST00000525132 KIFC2Q96AC6 838 aa5.15□□□□□ -1.59
CSDE1-209ENST00000525132 XAGE2Q96GT9 111 aa5.15□□□□□ -1.59
CSDE1-209ENST00000525132 ASB2Q96Q27 587 aa5.15□□□□□ -1.59
CSDE1-209ENST00000525132 SENP2Q9HC62 589 aa5.15□□□□□ -1.59
CSDE1-209ENST00000525132 TFIP11Q9UBB9 837 aaKnown RBP5.15□□□□□ -1.59
CSDE1-209ENST00000525132 SRPK3Q9UPE1 567 aa5.15□□□□□ -1.59
CSDE1-209ENST00000525132 KIAA1024Q9UPX6 916 aa5.15□□□□□ -1.59
CSDE1-209ENST00000525132 KDM6AO15550 1401 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-209ENST00000525132 ZFYVE9O95405 1425 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 KNDC1Q76NI1 1749 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 KIAA1551Q9HCM1 1747 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 A0A1W2PRU2 124 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 ATP5J2-PTCD1G3V325 749 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 TERTO14746 1132 aaKnown RBP5.14□□□□□ -1.59
CSDE1-209ENST00000525132 DDNO94850 711 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-209ENST00000525132 STAU1O95793 577 aaKnown RBP5.14□□□□□ -1.59
CSDE1-209ENST00000525132 LMNB1P20700 586 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 KCNA3P22001 575 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 GPC1P35052 558 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 RNF144AP50876 292 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-209ENST00000525132 EPHA4P54764 986 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 CLDN10P78369 228 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 USP4Q13107 963 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 DDB1Q16531 1140 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 NBPF1Q3BBV0 1214 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 FAM109BQ6ICB4 259 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-209ENST00000525132 USP38Q8NB14 1042 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 ZNF296Q8WUU4 475 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-209ENST00000525132 CALR3Q96L12 384 aaKnown RBP5.14□□□□□ -1.59
CSDE1-209ENST00000525132 SLC4A9Q96Q91 983 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 TAF1DQ9H5J8 278 aaPredicted RBP5.14□□□□□ -1.59
CSDE1-209ENST00000525132 ETNK1Q9HBU6 452 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 PRDM11Q9NQV5 511 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 TPRP12270 2363 aaKnown RBP5.14□□□□□ -1.59
CSDE1-209ENST00000525132 DNAH12Q6ZR08 3092 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 COL15A1P39059 1388 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 PARP4Q9UKK3 1724 aaKnown RBP5.14□□□□□ -1.59
CSDE1-209ENST00000525132 COL18A1P39060 1754 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 TNS3Q68CZ2 1445 aa5.14□□□□□ -1.59
CSDE1-209ENST00000525132 CTTNBP2Q8WZ74 1663 aa5.13□□□□□ -1.59
CSDE1-209ENST00000525132 RELBQ01201 579 aa5.13□□□□□ -1.59
CSDE1-209ENST00000525132 SAPCD2Q86UD0 394 aa5.13□□□□□ -1.59
CSDE1-209ENST00000525132 SIX5Q8N196 739 aa5.13□□□□□ -1.59
CSDE1-209ENST00000525132 SPATA18Q8TC71 538 aa5.13□□□□□ -1.59
CSDE1-209ENST00000525132 ACSBG1Q96GR2 724 aa5.13□□□□□ -1.59
CSDE1-209ENST00000525132 INSM2Q96T92 566 aaPredicted RBP5.13□□□□□ -1.59
CSDE1-209ENST00000525132 KRTAP4-2Q9BYR5 136 aa5.13□□□□□ -1.59
CSDE1-209ENST00000525132 GRIP2Q9C0E4 1043 aa5.13□□□□□ -1.59
CSDE1-209ENST00000525132 XRN1Q8IZH2 1706 aaKnown RBP5.13□□□□□ -1.59
CSDE1-209ENST00000525132 KIAA0100Q14667 2235 aaKnown RBP5.13□□□□□ -1.59
CSDE1-209ENST00000525132 KIAA0232Q92628 1395 aa5.13□□□□□ -1.59
CSDE1-209ENST00000525132 BCL9O00512 1426 aa5.13□□□□□ -1.59
CSDE1-209ENST00000525132 REV3LO60673 3130 aa5.12□□□□□ -1.59
CSDE1-209ENST00000525132 SPATA31C2B4DYI2 1134 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms