RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 CD97P48960 835 aa5.66□□□□□ -1.5
CSDE1-208ENST00000524652 NLRP12P59046 1061 aa5.66□□□□□ -1.5
CSDE1-208ENST00000524652 C19orf57Q0VDD7 668 aa5.66□□□□□ -1.5
CSDE1-208ENST00000524652 NFIAQ12857 509 aa5.66□□□□□ -1.5
CSDE1-208ENST00000524652 VN1R5Q7Z5H4 357 aa5.66□□□□□ -1.5
CSDE1-208ENST00000524652 C14orf37Q86TY3 774 aa5.66□□□□□ -1.5
CSDE1-208ENST00000524652 SOX17Q9H6I2 414 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-208ENST00000524652 FOXD3Q9UJU5 478 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-208ENST00000524652 HIF3AQ9Y2N7 669 aa5.66□□□□□ -1.5
CSDE1-208ENST00000524652 CARNS1A5YM72 827 aa5.65□□□□□ -1.5
CSDE1-208ENST00000524652 MEGF11A6BM72 1044 aa5.65□□□□□ -1.5
CSDE1-208ENST00000524652 EIF4EBP3O60516 100 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-208ENST00000524652 ZNF211Q13398 564 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-208ENST00000524652 IKBKEQ14164 716 aa5.65□□□□□ -1.5
CSDE1-208ENST00000524652 PEAR1Q5VY43 1037 aaPredicted RBP5.65□□□□□ -1.5
CSDE1-208ENST00000524652 FDX2Q6P4F2 183 aa5.65□□□□□ -1.5
CSDE1-208ENST00000524652 FAM20CQ8IXL6 584 aa5.65□□□□□ -1.5
CSDE1-208ENST00000524652 RUSC1Q9BVN2 902 aa5.65□□□□□ -1.5
CSDE1-208ENST00000524652 C7orf69Q9H7B7 122 aa5.65□□□□□ -1.5
CSDE1-208ENST00000524652 PCMTD2Q9NV79 361 aa5.65□□□□□ -1.5
CSDE1-208ENST00000524652 CCDC87Q9NVE4 849 aa5.65□□□□□ -1.5
CSDE1-208ENST00000524652 KIAA1324LA8MWY0 1029 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-208ENST00000524652 SOX1O00570 391 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-208ENST00000524652 SART1O43290 800 aaKnown RBP5.64□□□□□ -1.51
CSDE1-208ENST00000524652 ICMTO60725 284 aa5.64□□□□□ -1.51
CSDE1-208ENST00000524652 PREPP48147 710 aa5.64□□□□□ -1.51
CSDE1-208ENST00000524652 RNF43Q68DV7 783 aa5.64□□□□□ -1.51
CSDE1-208ENST00000524652 CLEC10AQ8IUN9 316 aa5.64□□□□□ -1.51
CSDE1-208ENST00000524652 ASAP3Q8TDY4 903 aa5.64□□□□□ -1.51
CSDE1-208ENST00000524652 DBNDD2Q9BQY9 259 aa5.64□□□□□ -1.51
CSDE1-208ENST00000524652 ZFYVE28Q9HCC9 887 aa5.64□□□□□ -1.51
CSDE1-208ENST00000524652 TGFB1P01137 390 aa5.63□□□□□ -1.51
CSDE1-208ENST00000524652 BMP3P12645 472 aa5.63□□□□□ -1.51
CSDE1-208ENST00000524652 ZDHHC13Q8IUH4 622 aa5.63□□□□□ -1.51
CSDE1-208ENST00000524652 TRIM42Q8IWZ5 723 aa5.63□□□□□ -1.51
CSDE1-208ENST00000524652 FAM83CQ9BQN1 747 aa5.63□□□□□ -1.51
CSDE1-208ENST00000524652 SUGCTQ9HAC7 445 aa5.63□□□□□ -1.51
CSDE1-208ENST00000524652 ANO2Q9NQ90 1003 aa5.63□□□□□ -1.51
CSDE1-208ENST00000524652 SCRIBQ14160 1630 aa5.63□□□□□ -1.51
CSDE1-208ENST00000524652 LOC100289279A0A1B0GTE1 492 aa5.62□□□□□ -1.51
CSDE1-208ENST00000524652 HMX2A2RU54 273 aa5.62□□□□□ -1.51
CSDE1-208ENST00000524652 H3BRB1 525 aa5.62□□□□□ -1.51
CSDE1-208ENST00000524652 COBLO75128 1261 aa5.62□□□□□ -1.51
CSDE1-208ENST00000524652 ESRRAP11474 423 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-208ENST00000524652 SSTR4P31391 388 aa5.62□□□□□ -1.51
CSDE1-208ENST00000524652 HGSNATQ68CP4 663 aa5.62□□□□□ -1.51
CSDE1-208ENST00000524652 GLYCTKQ8IVS8 523 aa5.62□□□□□ -1.51
CSDE1-208ENST00000524652 TMPRSS13Q9BYE2 586 aa5.62□□□□□ -1.51
CSDE1-208ENST00000524652 KCNF1Q9H3M0 494 aa5.62□□□□□ -1.51
CSDE1-208ENST00000524652 TUT1Q9H6E5 874 aaKnown RBP5.62□□□□□ -1.51
CSDE1-208ENST00000524652 CYP4F12Q9HCS2 524 aa5.62□□□□□ -1.51
CSDE1-208ENST00000524652 LATS2Q9NRM7 1088 aa5.62□□□□□ -1.51
CSDE1-208ENST00000524652 GAS2O43903 313 aaKnown RBP5.61□□□□□ -1.51
CSDE1-208ENST00000524652 TIAF1O95411 115 aa5.61□□□□□ -1.51
CSDE1-208ENST00000524652 NEFLP07196 543 aa5.61□□□□□ -1.51
CSDE1-208ENST00000524652 GRIK1P39086 918 aa5.61□□□□□ -1.51
CSDE1-208ENST00000524652 NUTM2GQ5VZR2 741 aa5.61□□□□□ -1.51
CSDE1-208ENST00000524652 INTS5Q6P9B9 1019 aaKnown RBP5.61□□□□□ -1.51
CSDE1-208ENST00000524652 BEND4Q6ZU67 534 aa5.61□□□□□ -1.51
CSDE1-208ENST00000524652 CCNJLQ8IV13 435 aa5.61□□□□□ -1.51
CSDE1-208ENST00000524652 GALNT12Q8IXK2 581 aa5.61□□□□□ -1.51
CSDE1-208ENST00000524652 SMG8Q8ND04 991 aaKnown RBP5.61□□□□□ -1.51
CSDE1-208ENST00000524652 USP26Q9BXU7 913 aa5.61□□□□□ -1.51
CSDE1-208ENST00000524652 BICRAQ9NZM4 1560 aa5.61□□□□□ -1.51
CSDE1-208ENST00000524652 BRPF3Q9ULD4 1205 aa5.61□□□□□ -1.51
CSDE1-208ENST00000524652 NDUFB5O43674 189 aa5.6□□□□□ -1.51
CSDE1-208ENST00000524652 SERPINB4P48594 390 aa5.6□□□□□ -1.51
CSDE1-208ENST00000524652 ARHGAP4P98171 946 aa5.6□□□□□ -1.51
CSDE1-208ENST00000524652 PDE3BQ13370 1112 aa5.6□□□□□ -1.51
CSDE1-208ENST00000524652 ECM1Q16610 540 aa5.6□□□□□ -1.51
CSDE1-208ENST00000524652 NRSN2Q9GZP1 204 aa5.6□□□□□ -1.51
CSDE1-208ENST00000524652 CLEC4MQ9H2X3 399 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-208ENST00000524652 A0A096LPE4 126 aa5.59□□□□□ -1.51
CSDE1-208ENST00000524652 A0A1W2PPZ6 126 aa5.59□□□□□ -1.51
CSDE1-208ENST00000524652 PRR19A6NJB7 356 aa5.59□□□□□ -1.51
CSDE1-208ENST00000524652 METTL12A8MUP2 240 aa5.59□□□□□ -1.51
CSDE1-208ENST00000524652 MAP4P27816 1152 aaKnown RBP5.59□□□□□ -1.51
CSDE1-208ENST00000524652 EXOSC6Q5RKV6 272 aaKnown RBP5.59□□□□□ -1.51
CSDE1-208ENST00000524652 CITED4Q96RK1 184 aa5.59□□□□□ -1.51
CSDE1-208ENST00000524652 FAM129BQ96TA1 746 aa5.59□□□□□ -1.51
CSDE1-208ENST00000524652 TCF12Q99081 682 aa5.59□□□□□ -1.51
CSDE1-208ENST00000524652 LIN7BQ9HAP6 207 aa5.59□□□□□ -1.51
CSDE1-208ENST00000524652 A0A1W2PP55 124 aa5.58□□□□□ -1.52
CSDE1-208ENST00000524652 MED26O95402 600 aa5.58□□□□□ -1.52
CSDE1-208ENST00000524652 DLGAP3O95886 979 aa5.58□□□□□ -1.52
CSDE1-208ENST00000524652 POLR3DP05423 398 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-208ENST00000524652 SPINK2P20155 84 aa5.58□□□□□ -1.52
CSDE1-208ENST00000524652 GSTM4Q03013 218 aa5.58□□□□□ -1.52
CSDE1-208ENST00000524652 PCDH1Q08174 1060 aa5.58□□□□□ -1.52
CSDE1-208ENST00000524652 CPSF6Q16630 551 aaKnown RBP eCLIP5.58□□□□□ -1.52
CSDE1-208ENST00000524652 SGO2Q562F6 1265 aa5.58□□□□□ -1.52
CSDE1-208ENST00000524652 HP1BP3Q5SSJ5 553 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-208ENST00000524652 C12orf50Q8NA57 414 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-208ENST00000524652 SHKBP1Q8TBC3 707 aa5.58□□□□□ -1.52
CSDE1-208ENST00000524652 CYP11A1P05108 521 aa5.57□□□□□ -1.52
CSDE1-208ENST00000524652 GRIA4P48058 902 aa5.57□□□□□ -1.52
CSDE1-208ENST00000524652 PDE4CQ08493 712 aa5.57□□□□□ -1.52
CSDE1-208ENST00000524652 KIAA0319Q5VV43 1072 aa5.57□□□□□ -1.52
CSDE1-208ENST00000524652 ERICH6Q7L0X2 663 aa5.57□□□□□ -1.52
CSDE1-208ENST00000524652 TXNDC2Q86VQ3 553 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms