RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	DZIP1L	Q8IYY4	767 aa	Known RBP	7.85	□□□□□ -1.15
MATR3-223	ENST00000514402	LIN7B	Q9HAP6	207 aa		7.85	□□□□□ -1.15
MATR3-223	ENST00000514402	POLR3D	P05423	398 aa	Predicted RBP	7.84	□□□□□ -1.15
MATR3-223	ENST00000514402	PDIA4	P13667	645 aa	Known RBP	7.84	□□□□□ -1.15
MATR3-223	ENST00000514402	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	7.84	□□□□□ -1.15
MATR3-223	ENST00000514402	ASAP3	Q8TDY4	903 aa		7.84	□□□□□ -1.15
MATR3-223	ENST00000514402	TCF12	Q99081	682 aa		7.84	□□□□□ -1.15
MATR3-223	ENST00000514402	CARD10	Q9BWT7	1032 aa		7.84	□□□□□ -1.15
MATR3-223	ENST00000514402		A0A096LPE4	126 aa		7.83	□□□□□ -1.16
MATR3-223	ENST00000514402		A0A1W2PPZ6	126 aa		7.83	□□□□□ -1.16
MATR3-223	ENST00000514402	TREH	O43280	583 aa		7.83	□□□□□ -1.16
MATR3-223	ENST00000514402	CDC25B	P30305	580 aa		7.83	□□□□□ -1.16
MATR3-223	ENST00000514402	PTPN12	Q05209	780 aa	Known RBP	7.83	□□□□□ -1.16
MATR3-223	ENST00000514402	DUOXA2	Q1HG44	320 aa		7.83	□□□□□ -1.16
MATR3-223	ENST00000514402	USPL1	Q5W0Q7	1092 aa		7.83	□□□□□ -1.16
MATR3-223	ENST00000514402	PRPF40B	Q6NWY9	871 aa	Known RBP	7.83	□□□□□ -1.16
MATR3-223	ENST00000514402	TP53INP1	Q96A56	240 aa		7.83	□□□□□ -1.16
MATR3-223	ENST00000514402	CCDC74A	Q96AQ1	378 aa		7.83	□□□□□ -1.16
MATR3-223	ENST00000514402	KLHDC7B	Q96G42	594 aa		7.83	□□□□□ -1.16
MATR3-223	ENST00000514402	CEP41	Q9BYV8	373 aa		7.83	□□□□□ -1.16
MATR3-223	ENST00000514402	NPHS2	Q9NP85	383 aa		7.83	□□□□□ -1.16
MATR3-223	ENST00000514402	DYRK3	O43781	588 aa		7.82	□□□□□ -1.16
MATR3-223	ENST00000514402	ESRRA	P11474	423 aa	Predicted RBP	7.82	□□□□□ -1.16
MATR3-223	ENST00000514402	DSC3	Q14574	896 aa		7.82	□□□□□ -1.16
MATR3-223	ENST00000514402	UVSSA	Q2YD98	709 aa		7.82	□□□□□ -1.16
MATR3-223	ENST00000514402	ACAD11	Q709F0	780 aa		7.82	□□□□□ -1.16
MATR3-223	ENST00000514402	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7.82	□□□□□ -1.16
MATR3-223	ENST00000514402	MEGF10	Q96KG7	1140 aa		7.82	□□□□□ -1.16
MATR3-223	ENST00000514402	EHD4	Q9H223	541 aa		7.82	□□□□□ -1.16
MATR3-223	ENST00000514402	CLEC4M	Q9H2X3	399 aa	Predicted RBP	7.82	□□□□□ -1.16
MATR3-223	ENST00000514402	TRAK1	Q9UPV9	953 aa		7.82	□□□□□ -1.16
MATR3-223	ENST00000514402	SOX1	O00570	391 aa	Predicted RBP	7.81	□□□□□ -1.16
MATR3-223	ENST00000514402	ADAM11	O75078	769 aa		7.81	□□□□□ -1.16
MATR3-223	ENST00000514402	ITPKA	P23677	461 aa		7.81	□□□□□ -1.16
MATR3-223	ENST00000514402	SLC7A3	Q8WY07	619 aa		7.81	□□□□□ -1.16
MATR3-223	ENST00000514402	ASB16	Q96NS5	453 aa		7.81	□□□□□ -1.16
MATR3-223	ENST00000514402	SEMA6B	Q9H3T3	888 aa		7.81	□□□□□ -1.16
MATR3-223	ENST00000514402	KCNK4	Q9NYG8	393 aa		7.81	□□□□□ -1.16
MATR3-223	ENST00000514402	WISP1	O95388	367 aa		7.8	□□□□□ -1.16
MATR3-223	ENST00000514402	GRIA4	P48058	902 aa		7.8	□□□□□ -1.16
MATR3-223	ENST00000514402	PLCB3	Q01970	1234 aa		7.8	□□□□□ -1.16
MATR3-223	ENST00000514402	KIAA1211	Q6ZU35	1233 aa		7.8	□□□□□ -1.16
MATR3-223	ENST00000514402	RNF208	Q9H0X6	261 aa		7.8	□□□□□ -1.16
MATR3-223	ENST00000514402	ZFYVE1	Q9HBF4	777 aa		7.8	□□□□□ -1.16
MATR3-223	ENST00000514402	MEGF11	A6BM72	1044 aa		7.79	□□□□□ -1.16
MATR3-223	ENST00000514402	ALX3	O95076	343 aa		7.79	□□□□□ -1.16
MATR3-223	ENST00000514402	GLB1	P16278	677 aa		7.79	□□□□□ -1.16
MATR3-223	ENST00000514402	PCDH1	Q08174	1060 aa		7.79	□□□□□ -1.16
MATR3-223	ENST00000514402	ENOX2	Q16206	610 aa	Known RBP	7.79	□□□□□ -1.16
MATR3-223	ENST00000514402	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	7.79	□□□□□ -1.16
MATR3-223	ENST00000514402	ANKRD34A	Q69YU3	496 aa		7.79	□□□□□ -1.16
MATR3-223	ENST00000514402	SLC51A	Q86UW1	340 aa		7.79	□□□□□ -1.16
MATR3-223	ENST00000514402	DDX54	Q8TDD1	881 aa	Known RBP	7.79	□□□□□ -1.16
MATR3-223	ENST00000514402	FBF1	Q8TES7	1133 aa		7.79	□□□□□ -1.16
MATR3-223	ENST00000514402	NLRP2	Q9NX02	1062 aa		7.79	□□□□□ -1.16
MATR3-223	ENST00000514402	METTL12	A8MUP2	240 aa		7.78	□□□□□ -1.16
MATR3-223	ENST00000514402	GADD45B	O75293	160 aa	Predicted RBP	7.78	□□□□□ -1.16
MATR3-223	ENST00000514402	FMR1	Q06787	632 aa	Known RBP eCLIP	7.78	□□□□□ -1.16
MATR3-223	ENST00000514402	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	7.78	□□□□□ -1.16
MATR3-223	ENST00000514402	AGGF1	Q8N302	714 aa	eCLIP	7.78	□□□□□ -1.16
MATR3-223	ENST00000514402	ZNF576	Q9H609	170 aa		7.78	□□□□□ -1.16
MATR3-223	ENST00000514402	ABCB6	Q9NP58	842 aa		7.78	□□□□□ -1.16
MATR3-223	ENST00000514402	PPP4R2	Q9NY27	417 aa		7.78	□□□□□ -1.16
MATR3-223	ENST00000514402	DDX3Y	O15523	660 aa	Known RBP	7.77	□□□□□ -1.17
MATR3-223	ENST00000514402	B3GALT4	O96024	378 aa		7.77	□□□□□ -1.17
MATR3-223	ENST00000514402	XRCC5	P13010	732 aa	Known RBP	7.77	□□□□□ -1.17
MATR3-223	ENST00000514402	NLRP12	P59046	1061 aa		7.77	□□□□□ -1.17
MATR3-223	ENST00000514402	PRR23C	Q6ZRP0	262 aa		7.77	□□□□□ -1.17
MATR3-223	ENST00000514402	UBASH3B	Q8TF42	649 aa		7.77	□□□□□ -1.17
MATR3-223	ENST00000514402	RUSC1	Q9BVN2	902 aa		7.77	□□□□□ -1.17
MATR3-223	ENST00000514402	PNMA6F	A0A0J9YX94	578 aa		7.76	□□□□□ -1.17
MATR3-223	ENST00000514402	TMEM238L	A0A1B0GVL6	79 aa		7.76	□□□□□ -1.17
MATR3-223	ENST00000514402	CYP11A1	P05108	521 aa		7.76	□□□□□ -1.17
MATR3-223	ENST00000514402	SPRED3	Q2MJR0	410 aa		7.76	□□□□□ -1.17
MATR3-223	ENST00000514402	SND1	Q7KZF4	910 aa	Known RBP eCLIP	7.76	□□□□□ -1.17
MATR3-223	ENST00000514402	FAM46A	Q96IP4	442 aa	Known RBP	7.76	□□□□□ -1.17
MATR3-223	ENST00000514402	SUGCT	Q9HAC7	445 aa		7.76	□□□□□ -1.17
MATR3-223	ENST00000514402	LOC100289279	A0A1B0GTE1	492 aa		7.75	□□□□□ -1.17
MATR3-223	ENST00000514402	ITGB7	P26010	798 aa		7.75	□□□□□ -1.17
MATR3-223	ENST00000514402	GSTM4	Q03013	218 aa		7.75	□□□□□ -1.17
MATR3-223	ENST00000514402	GRM2	Q14416	872 aa		7.75	□□□□□ -1.17
MATR3-223	ENST00000514402	HGSNAT	Q68CP4	663 aa		7.75	□□□□□ -1.17
MATR3-223	ENST00000514402	ALG1L	Q6GMV1	187 aa		7.75	□□□□□ -1.17
MATR3-223	ENST00000514402	GLIS3	Q8NEA6	775 aa		7.75	□□□□□ -1.17
MATR3-223	ENST00000514402	EPS8L3	Q8TE67	593 aa	Known RBP	7.75	□□□□□ -1.17
MATR3-223	ENST00000514402	UBL7	Q96S82	380 aa	Predicted RBP	7.75	□□□□□ -1.17
MATR3-223	ENST00000514402	TMPRSS13	Q9BYE2	586 aa		7.75	□□□□□ -1.17
MATR3-223	ENST00000514402	SRCIN1	Q9C0H9	1055 aa		7.75	□□□□□ -1.17
MATR3-223	ENST00000514402	NRSN2	Q9GZP1	204 aa		7.75	□□□□□ -1.17
MATR3-223	ENST00000514402	HIF3A	Q9Y2N7	669 aa		7.75	□□□□□ -1.17
MATR3-223	ENST00000514402	DHX15	O43143	795 aa	Known RBP	7.74	□□□□□ -1.17
MATR3-223	ENST00000514402	COL19A1	Q14993	1142 aa		7.74	□□□□□ -1.17
MATR3-223	ENST00000514402	ZNF423	Q2M1K9	1284 aa		7.74	□□□□□ -1.17
MATR3-223	ENST00000514402	PRSS36	Q5K4E3	855 aa		7.74	□□□□□ -1.17
MATR3-223	ENST00000514402	FDX2	Q6P4F2	183 aa		7.74	□□□□□ -1.17
MATR3-223	ENST00000514402	AEBP1	Q8IUX7	1158 aa		7.74	□□□□□ -1.17
MATR3-223	ENST00000514402	CYP4F12	Q9HCS2	524 aa		7.74	□□□□□ -1.17
MATR3-223	ENST00000514402	GIPC1	O14908	333 aa		7.73	□□□□□ -1.17
MATR3-223	ENST00000514402	GSC2	O15499	205 aa		7.73	□□□□□ -1.17
MATR3-223	ENST00000514402	SART1	O43290	800 aa	Known RBP	7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms