RNA–Protein interactions for RNA: ENST00000513418.1

SMAD5-208, Transcript of SMAD family member 5, humanhuman

TSL 5

Gene SMAD5, Length 523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-208ENST00000513418 SOX1O00570 391 aaPredicted RBP4.97□□□□□ -1.61
SMAD5-208ENST00000513418 ENC1O14682 589 aa4.97□□□□□ -1.61
SMAD5-208ENST00000513418 WISP1O95388 367 aa4.97□□□□□ -1.61
SMAD5-208ENST00000513418 GDF11O95390 407 aa4.97□□□□□ -1.61
SMAD5-208ENST00000513418 ITPKAP23677 461 aa4.97□□□□□ -1.61
SMAD5-208ENST00000513418 CDK8P49336 464 aa4.97□□□□□ -1.61
SMAD5-208ENST00000513418 PTPN11Q06124 597 aaPredicted RBP4.97□□□□□ -1.61
SMAD5-208ENST00000513418 ZNF394Q53GI3 561 aa4.97□□□□□ -1.61
SMAD5-208ENST00000513418 ALG1LQ6GMV1 187 aa4.97□□□□□ -1.61
SMAD5-208ENST00000513418 ELMSAN1Q6PJG2 1045 aa4.97□□□□□ -1.61
SMAD5-208ENST00000513418 TMEM151AQ8N4L1 468 aa4.97□□□□□ -1.61
SMAD5-208ENST00000513418 SCARF2Q96GP6 870 aaPredicted RBP4.97□□□□□ -1.61
SMAD5-208ENST00000513418 EFCC1Q9HA90 598 aa4.97□□□□□ -1.61
SMAD5-208ENST00000513418 VTI1BQ9UEU0 232 aa4.97□□□□□ -1.61
SMAD5-208ENST00000513418 LINC01387J3KSC0 135 aa4.96□□□□□ -1.62
SMAD5-208ENST00000513418 EDN3P14138 238 aa4.96□□□□□ -1.62
SMAD5-208ENST00000513418 RACK1P63244 317 aaKnown RBP4.96□□□□□ -1.62
SMAD5-208ENST00000513418 SETDB1Q15047 1291 aa4.96□□□□□ -1.62
SMAD5-208ENST00000513418 FOXD4L6Q3SYB3 417 aaPredicted RBP4.96□□□□□ -1.62
SMAD5-208ENST00000513418 KANK3Q6NY19 840 aa4.96□□□□□ -1.62
SMAD5-208ENST00000513418 FOXD4L3Q6VB84 417 aaPredicted RBP4.96□□□□□ -1.62
SMAD5-208ENST00000513418 TPTE2Q6XPS3 522 aa4.96□□□□□ -1.62
SMAD5-208ENST00000513418 DMRTC2Q8IXT2 367 aaPredicted RBP4.96□□□□□ -1.62
SMAD5-208ENST00000513418 GRIN3AQ8TCU5 1115 aa4.96□□□□□ -1.62
SMAD5-208ENST00000513418 FBF1Q8TES7 1133 aa4.96□□□□□ -1.62
SMAD5-208ENST00000513418 GDF2Q9UK05 429 aaPredicted RBP4.96□□□□□ -1.62
SMAD5-208ENST00000513418 ITGB2P05107 769 aa4.95□□□□□ -1.62
SMAD5-208ENST00000513418 ESRRAP11474 423 aaPredicted RBP4.95□□□□□ -1.62
SMAD5-208ENST00000513418 NEUROD1Q13562 356 aa4.95□□□□□ -1.62
SMAD5-208ENST00000513418 MAP3K11Q16584 847 aa4.95□□□□□ -1.62
SMAD5-208ENST00000513418 SHISA2Q6UWI4 295 aa4.95□□□□□ -1.62
SMAD5-208ENST00000513418 IL22RA1Q8N6P7 574 aa4.95□□□□□ -1.62
SMAD5-208ENST00000513418 ADAM19Q9H013 955 aa4.95□□□□□ -1.62
SMAD5-208ENST00000513418 SEC31BQ9NQW1 1179 aa4.95□□□□□ -1.62
SMAD5-208ENST00000513418 TLR6Q9Y2C9 796 aa4.95□□□□□ -1.62
SMAD5-208ENST00000513418 DLL1O00548 723 aa4.94□□□□□ -1.62
SMAD5-208ENST00000513418 SORBS3O60504 671 aa4.94□□□□□ -1.62
SMAD5-208ENST00000513418 GHRHP01286 108 aa4.94□□□□□ -1.62
SMAD5-208ENST00000513418 NEFLP07196 543 aa4.94□□□□□ -1.62
SMAD5-208ENST00000513418 EIF4BP23588 611 aaKnown RBP4.94□□□□□ -1.62
SMAD5-208ENST00000513418 TNNI2P48788 182 aa4.94□□□□□ -1.62
SMAD5-208ENST00000513418 NEDD1Q8NHV4 660 aa4.94□□□□□ -1.62
SMAD5-208ENST00000513418 UBASH3BQ8TF42 649 aa4.94□□□□□ -1.62
SMAD5-208ENST00000513418 PMEPA1Q969W9 287 aa4.94□□□□□ -1.62
SMAD5-208ENST00000513418 WDR89Q96FK6 387 aaPredicted RBP4.94□□□□□ -1.62
SMAD5-208ENST00000513418 KLHDC7BQ96G42 594 aa4.94□□□□□ -1.62
SMAD5-208ENST00000513418 FRRS1LQ9P0K9 344 aa4.94□□□□□ -1.62
SMAD5-208ENST00000513418 AKAP2Q9Y2D5 859 aa4.94□□□□□ -1.62
SMAD5-208ENST00000513418 PCDHB5Q9Y5E4 795 aa4.94□□□□□ -1.62
SMAD5-208ENST00000513418 USP31Q70CQ4 1352 aa4.93□□□□□ -1.62
SMAD5-208ENST00000513418 RGS9O75916 674 aaPredicted RBP4.93□□□□□ -1.62
SMAD5-208ENST00000513418 VAMP1P23763 118 aa4.93□□□□□ -1.62
SMAD5-208ENST00000513418 ATP2B2Q01814 1243 aa4.93□□□□□ -1.62
SMAD5-208ENST00000513418 XPCQ01831 940 aaPredicted RBP4.93□□□□□ -1.62
SMAD5-208ENST00000513418 PCDH1Q08174 1060 aa4.93□□□□□ -1.62
SMAD5-208ENST00000513418 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.93□□□□□ -1.62
SMAD5-208ENST00000513418 PDZD3Q86UT5 571 aa4.93□□□□□ -1.62
SMAD5-208ENST00000513418 BEND7Q8N7W2 519 aaPredicted RBP4.93□□□□□ -1.62
SMAD5-208ENST00000513418 CRELD1Q96HD1 420 aa4.93□□□□□ -1.62
SMAD5-208ENST00000513418 SRA1Q9HD15 236 aaKnown RBP4.93□□□□□ -1.62
SMAD5-208ENST00000513418 NLRP2Q9NX02 1062 aa4.93□□□□□ -1.62
SMAD5-208ENST00000513418 BMP6P22004 513 aa4.92□□□□□ -1.62
SMAD5-208ENST00000513418 GARTP22102 1010 aa4.92□□□□□ -1.62
SMAD5-208ENST00000513418 ZNF326Q5BKZ1 582 aaKnown RBP4.92□□□□□ -1.62
SMAD5-208ENST00000513418 MSL1Q68DK7 614 aa4.92□□□□□ -1.62
SMAD5-208ENST00000513418 ERMP1Q7Z2K6 904 aa4.92□□□□□ -1.62
SMAD5-208ENST00000513418 TMEM87AQ8NBN3 555 aa4.92□□□□□ -1.62
SMAD5-208ENST00000513418 SLC7A3Q8WY07 619 aa4.92□□□□□ -1.62
SMAD5-208ENST00000513418 BSNDQ8WZ55 320 aa4.92□□□□□ -1.62
SMAD5-208ENST00000513418 NECAB3Q96P71 396 aaPredicted RBP4.92□□□□□ -1.62
SMAD5-208ENST00000513418 ZC3H12CQ9C0D7 883 aaKnown RBP4.92□□□□□ -1.62
SMAD5-208ENST00000513418 FAM8A1Q9UBU6 413 aa4.92□□□□□ -1.62
SMAD5-208ENST00000513418 SPG7Q9UQ90 795 aa4.92□□□□□ -1.62
SMAD5-208ENST00000513418 A0A0A0MRY4 1105 aa4.91□□□□□ -1.62
SMAD5-208ENST00000513418 B3GALT4O96024 378 aa4.91□□□□□ -1.62
SMAD5-208ENST00000513418 TFE3P19532 575 aaPredicted RBP4.91□□□□□ -1.62
SMAD5-208ENST00000513418 AMPD1P23109 780 aa4.91□□□□□ -1.62
SMAD5-208ENST00000513418 CDC27P30260 824 aa4.91□□□□□ -1.62
SMAD5-208ENST00000513418 GRIK4Q16099 956 aa4.91□□□□□ -1.62
SMAD5-208ENST00000513418 DTHD1Q6ZMT9 781 aa4.91□□□□□ -1.62
SMAD5-208ENST00000513418 FBXO27Q8NI29 283 aa4.91□□□□□ -1.62
SMAD5-208ENST00000513418 TTC9Q92623 222 aa4.91□□□□□ -1.62
SMAD5-208ENST00000513418 GAL3ST3Q96A11 431 aa4.91□□□□□ -1.62
SMAD5-208ENST00000513418 DCAF5Q96JK2 942 aa4.91□□□□□ -1.62
SMAD5-208ENST00000513418 PLVAPQ9BX97 442 aa4.91□□□□□ -1.62
SMAD5-208ENST00000513418 RRAGCQ9HB90 399 aa4.91□□□□□ -1.62
SMAD5-208ENST00000513418 KBTBD4Q9NVX7 518 aa4.91□□□□□ -1.62
SMAD5-208ENST00000513418 ADAMTS1Q9UHI8 967 aa4.91□□□□□ -1.62
SMAD5-208ENST00000513418 FSCN2O14926 492 aa4.9□□□□□ -1.63
SMAD5-208ENST00000513418 LILRB5O75023 590 aa4.9□□□□□ -1.63
SMAD5-208ENST00000513418 SMNDC1O75940 238 aaKnown RBP eCLIP4.9□□□□□ -1.63
SMAD5-208ENST00000513418 ALX3O95076 343 aa4.9□□□□□ -1.63
SMAD5-208ENST00000513418 ALAS2P22557 587 aa4.9□□□□□ -1.63
SMAD5-208ENST00000513418 CRKP46108 304 aa4.9□□□□□ -1.63
SMAD5-208ENST00000513418 NLRP12P59046 1061 aa4.9□□□□□ -1.63
SMAD5-208ENST00000513418 FAM160A1Q05DH4 1040 aa4.9□□□□□ -1.63
SMAD5-208ENST00000513418 PODNQ7Z5L7 613 aa4.9□□□□□ -1.63
SMAD5-208ENST00000513418 NT5DC4Q86YG4 428 aa4.9□□□□□ -1.63
SMAD5-208ENST00000513418 AGGF1Q8N302 714 aaeCLIP4.9□□□□□ -1.63
SMAD5-208ENST00000513418 SPACA7Q96KW9 195 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms