RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 UIMC1Q96RL1 719 aa10.07□□□□□ -0.8
VCAN-208ENST00000512590 SFMBT1Q9UHJ3 866 aa10.07□□□□□ -0.8
VCAN-208ENST00000512590 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.06□□□□□ -0.8
VCAN-208ENST00000512590 UFL1O94874 794 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 BANK1Q8NDB2 785 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 BOLA2Q9H3K6 86 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 PPANQ9NQ55 473 aaKnown RBP10.06□□□□□ -0.8
VCAN-208ENST00000512590 COPRSQ9NQ92 184 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.06□□□□□ -0.8
VCAN-208ENST00000512590 CNTLNQ9NXG0 1405 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 MAST3O60307 1309 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 DLGAP5Q15398 846 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 FYCO1Q9BQS8 1478 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 PPP1R12AO14974 1030 aaPredicted RBP10.06□□□□□ -0.8
VCAN-208ENST00000512590 LDHBP07195 334 aaKnown RBP10.06□□□□□ -0.8
VCAN-208ENST00000512590 YARSP54577 528 aaKnown RBP10.06□□□□□ -0.8
VCAN-208ENST00000512590 RAB11FIP4Q86YS3 637 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 FNBP4Q8N3X1 1017 aaPredicted RBP10.06□□□□□ -0.8
VCAN-208ENST00000512590 PPFIBP2Q8ND30 876 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 USP47Q96K76 1375 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 DISP3Q9P2K9 1392 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 HEXIM1O94992 359 aaKnown RBP10.06□□□□□ -0.8
VCAN-208ENST00000512590 SESTD1Q86VW0 696 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 NCAPG2Q86XI2 1143 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 PALM2Q8IXS6 379 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 PGBD3Q8N328 593 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 TRIM7Q9C029 511 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 SPECC1L-ADORA2AF8WAN1 911 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 ATF7P17544 494 aaPredicted RBP10.06□□□□□ -0.8
VCAN-208ENST00000512590 ARL4DP49703 201 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 ZNF772Q68DY9 489 aaPredicted RBP10.06□□□□□ -0.8
VCAN-208ENST00000512590 CNNM3Q8NE01 707 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 HYPKQ9NX55 129 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 FAM184BQ9ULE4 1060 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 SLC4A4Q9Y6R1 1079 aa10.06□□□□□ -0.8
VCAN-208ENST00000512590 FAM95CA0A1B0GW59 222 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 P4HA1P13674 534 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 ZNF18P17022 549 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 DPYDQ12882 1025 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 TTC6Q86TZ1 520 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 CCDC83Q8IWF9 413 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 SPATA17Q96L03 361 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 CCDC110Q8TBZ0 833 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 MMTAG2Q9BU76 263 aaKnown RBP10.05□□□□□ -0.8
VCAN-208ENST00000512590 ATP6V0A2Q9Y487 856 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 CASQ1P31415 396 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 PRKCQQ04759 706 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 DCAF15Q66K64 600 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 MYO15BQ96JP2 1530 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 CCDC66A2RUB6 948 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 OCM2P0CE71 109 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 OCMP0CE72 109 aaPredicted RBP10.05□□□□□ -0.8
VCAN-208ENST00000512590 SFPQP23246 707 aaKnown RBP eCLIP10.05□□□□□ -0.8
VCAN-208ENST00000512590 SLC12A2P55011 1212 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 MKRN3Q13064 507 aaKnown RBP10.05□□□□□ -0.8
VCAN-208ENST00000512590 ERCC6LQ2NKX8 1250 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 FBXW10Q5XX13 1052 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 NSMFQ6X4W1 530 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 TRIM47Q96LD4 638 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 SLC52A1Q9NWF4 448 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 S100BP04271 92 aaPredicted RBP10.05□□□□□ -0.8
VCAN-208ENST00000512590 CPXCR1Q8N123 301 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 TMCO5AQ8N6Q1 288 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 MIPOL1Q8TD10 442 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 SEPT8Q92599 483 aa10.05□□□□□ -0.8
VCAN-208ENST00000512590 WDR33Q9C0J8 1336 aaKnown RBP10.04□□□□□ -0.8
VCAN-208ENST00000512590 EXOC7Q9UPT5 735 aa10.04□□□□□ -0.8
VCAN-208ENST00000512590 AMOTL2Q9Y2J4 779 aa10.04□□□□□ -0.8
VCAN-208ENST00000512590 ZSCAN20P17040 1043 aaPredicted RBP10.04□□□□□ -0.8
VCAN-208ENST00000512590 NOP14P78316 857 aaKnown RBP10.04□□□□□ -0.8
VCAN-208ENST00000512590 MCF2L2Q86YR7 1114 aa10.04□□□□□ -0.8
VCAN-208ENST00000512590 C2orf69Q8N8R5 385 aa10.04□□□□□ -0.8
VCAN-208ENST00000512590 KIFAP3Q92845 792 aa10.04□□□□□ -0.8
VCAN-208ENST00000512590 OLA1Q9NTK5 396 aaKnown RBP10.04□□□□□ -0.8
VCAN-208ENST00000512590 CAPN9O14815 690 aa10.04□□□□□ -0.8
VCAN-208ENST00000512590 CHMP2AO43633 222 aa10.04□□□□□ -0.8
VCAN-208ENST00000512590 ITIH3Q06033 890 aa10.04□□□□□ -0.8
VCAN-208ENST00000512590 DZIP3Q86Y13 1208 aaKnown RBP10.04□□□□□ -0.8
VCAN-208ENST00000512590 DOLKQ9UPQ8 538 aa10.04□□□□□ -0.8
VCAN-208ENST00000512590 IARSP41252 1262 aaKnown RBP10.04□□□□□ -0.8
VCAN-208ENST00000512590 GCC1Q96CN9 775 aa10.04□□□□□ -0.8
VCAN-208ENST00000512590 NUDT16Q96DE0 195 aaKnown RBP10.04□□□□□ -0.8
VCAN-208ENST00000512590 TRIM56Q9BRZ2 755 aaKnown RBP10.04□□□□□ -0.8
VCAN-208ENST00000512590 MAGEB6P1A0A0J9YX57 407 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 RAPGEF3O95398 923 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 GUCY1B3Q02153 619 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 RNF219Q5W0B1 726 aaPredicted RBP10.03□□□□□ -0.8
VCAN-208ENST00000512590 METTL23Q86XA0 190 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 SLC26A6Q9BXS9 759 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 FEZ2Q9UHY8 353 aaPredicted RBP10.03□□□□□ -0.8
VCAN-208ENST00000512590 PRPF38AQ8NAV1 312 aaKnown RBP10.03□□□□□ -0.8
VCAN-208ENST00000512590 SELENOOQ9BVL4 669 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 NPHP3Q7Z494 1330 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 STAT6P42226 847 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 EXOSC9Q06265 439 aaKnown RBP10.03□□□□□ -0.8
VCAN-208ENST00000512590 WTAPQ15007 396 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 UAP1Q16222 522 aaPredicted RBP10.03□□□□□ -0.8
VCAN-208ENST00000512590 UBN1Q9NPG3 1134 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 SNRKQ9NRH2 765 aa10.03□□□□□ -0.8
VCAN-208ENST00000512590 RMND1Q9NWS8 449 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms