RNA–Protein interactions for RNA: ENST00000508579.5

CAST-222, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-222ENST00000508579 NPC1L1Q9UHC9 1359 aa9.59□□□□□ -0.87
CAST-222ENST00000508579 TMEM238LA0A1B0GVL6 79 aa9.59□□□□□ -0.87
CAST-222ENST00000508579 ZNF16P17020 682 aaPredicted RBP9.59□□□□□ -0.87
CAST-222ENST00000508579 EIF4BP23588 611 aaKnown RBP9.59□□□□□ -0.87
CAST-222ENST00000508579 MATR3P43243 847 aaKnown RBP eCLIP9.59□□□□□ -0.87
CAST-222ENST00000508579 RCN1Q15293 331 aa9.59□□□□□ -0.87
CAST-222ENST00000508579 GPT2Q8TD30 523 aa9.59□□□□□ -0.87
CAST-222ENST00000508579 LRRC45Q96CN5 670 aa9.59□□□□□ -0.87
CAST-222ENST00000508579 TBC1D31Q96DN5 1066 aa9.59□□□□□ -0.87
CAST-222ENST00000508579 FAM107BQ9H098 131 aa9.59□□□□□ -0.87
CAST-222ENST00000508579 COG6Q9Y2V7 657 aa9.59□□□□□ -0.87
CAST-222ENST00000508579 LUC7L2Q9Y383 392 aaKnown RBP9.59□□□□□ -0.87
CAST-222ENST00000508579 EIF3FO00303 357 aaPredicted RBP9.58□□□□□ -0.88
CAST-222ENST00000508579 TRIM66O15016 1216 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 ERC2O15083 957 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 ZBED4O75132 1171 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 RNASEH2AO75792 299 aaKnown RBP9.58□□□□□ -0.88
CAST-222ENST00000508579 S100BP04271 92 aaPredicted RBP9.58□□□□□ -0.88
CAST-222ENST00000508579 HDAC4P56524 1084 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 KANK3Q6NY19 840 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 C11orf74Q86VG3 221 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 RNF168Q8IYW5 571 aaPredicted RBP9.58□□□□□ -0.88
CAST-222ENST00000508579 CHPFQ8IZ52 775 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 C3orf20Q8ND61 904 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 JARID2Q92833 1246 aaPredicted RBP9.58□□□□□ -0.88
CAST-222ENST00000508579 DTNBP1Q96EV8 351 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 PDLIM2Q96JY6 352 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 NEK1Q96PY6 1258 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 RUFY1Q96T51 708 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 TSGA10Q9BZW7 698 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 GTPBP10A4D1E9 387 aaKnown RBP9.58□□□□□ -0.88
CAST-222ENST00000508579 LDHAP00338 332 aaKnown RBP9.58□□□□□ -0.88
CAST-222ENST00000508579 PYGLP06737 847 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 VIL1P09327 827 aaKnown RBP9.58□□□□□ -0.88
CAST-222ENST00000508579 MRPL12P52815 198 aaKnown RBP9.58□□□□□ -0.88
CAST-222ENST00000508579 CFAP58Q5T655 872 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 AFAP1Q8N556 730 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 SMYD1Q8NB12 490 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 APPL2Q8NEU8 664 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 FBXO18Q8NFZ0 1043 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 MAML1Q92585 1016 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 RGL1Q9NZL6 768 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 USTQ9Y2C2 406 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 GJA3Q9Y6H8 435 aa9.58□□□□□ -0.88
CAST-222ENST00000508579 MAPKBP1O60336 1514 aa9.57□□□□□ -0.88
CAST-222ENST00000508579 FGFR1OPO95684 399 aaKnown RBP9.57□□□□□ -0.88
CAST-222ENST00000508579 KIF5BP33176 963 aa9.57□□□□□ -0.88
CAST-222ENST00000508579 PDXDC1Q6P996 788 aa9.57□□□□□ -0.88
CAST-222ENST00000508579 ERC1Q8IUD2 1116 aa9.57□□□□□ -0.88
CAST-222ENST00000508579 SUN5Q8TC36 379 aa9.57□□□□□ -0.88
CAST-222ENST00000508579 HELQQ8TDG4 1101 aa9.57□□□□□ -0.88
CAST-222ENST00000508579 THUMPD2Q9BTF0 503 aaKnown RBP9.57□□□□□ -0.88
CAST-222ENST00000508579 PSD3Q9NYI0 1048 aa9.57□□□□□ -0.88
CAST-222ENST00000508579 RUSC2Q8N2Y8 1516 aa9.57□□□□□ -0.88
CAST-222ENST00000508579 A0A1W2PRQ8 180 aa9.56□□□□□ -0.88
CAST-222ENST00000508579 H0Y3Z8 333 aa9.56□□□□□ -0.88
CAST-222ENST00000508579 RPSAP08865 295 aaKnown RBP9.56□□□□□ -0.88
CAST-222ENST00000508579 CTAG1AP78358 180 aa9.56□□□□□ -0.88
CAST-222ENST00000508579 G3BP1Q13283 466 aaKnown RBP eCLIP9.56□□□□□ -0.88
CAST-222ENST00000508579 LAMB3Q13751 1172 aa9.56□□□□□ -0.88
CAST-222ENST00000508579 SUZ12Q15022 739 aaKnown RBP9.56□□□□□ -0.88
CAST-222ENST00000508579 BOLA3Q53S33 107 aa9.56□□□□□ -0.88
CAST-222ENST00000508579 RC3H1Q5TC82 1133 aaKnown RBP9.56□□□□□ -0.88
CAST-222ENST00000508579 OLFML1Q6UWY5 402 aa9.56□□□□□ -0.88
CAST-222ENST00000508579 BICD2Q8TD16 824 aa9.56□□□□□ -0.88
CAST-222ENST00000508579 ZNF496Q96IT1 587 aaPredicted RBP9.56□□□□□ -0.88
CAST-222ENST00000508579 UROC1Q96N76 676 aa9.56□□□□□ -0.88
CAST-222ENST00000508579 SPAG5Q96R06 1193 aa9.56□□□□□ -0.88
CAST-222ENST00000508579 AS3MTQ9HBK9 375 aa9.56□□□□□ -0.88
CAST-222ENST00000508579 IFT57Q9NWB7 429 aa9.56□□□□□ -0.88
CAST-222ENST00000508579 TFIP11Q9UBB9 837 aaKnown RBP9.56□□□□□ -0.88
CAST-222ENST00000508579 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.56□□□□□ -0.88
CAST-222ENST00000508579 KIAA1107Q9UPP5 1409 aa9.56□□□□□ -0.88
CAST-222ENST00000508579 PER1O15534 1290 aaPredicted RBP9.55□□□□□ -0.88
CAST-222ENST00000508579 ZFXP17010 805 aaPredicted RBP9.55□□□□□ -0.88
CAST-222ENST00000508579 CCNHP51946 323 aaPredicted RBP9.55□□□□□ -0.88
CAST-222ENST00000508579 TPM4P67936 248 aa9.55□□□□□ -0.88
CAST-222ENST00000508579 GBP7Q8N8V2 638 aaPredicted RBP9.55□□□□□ -0.88
CAST-222ENST00000508579 WDR66Q8TBY9 1149 aa9.55□□□□□ -0.88
CAST-222ENST00000508579 ANKRD49Q8WVL7 239 aa9.55□□□□□ -0.88
CAST-222ENST00000508579 PAWRQ96IZ0 340 aaKnown RBP9.55□□□□□ -0.88
CAST-222ENST00000508579 OSBPL10Q9BXB5 764 aa9.55□□□□□ -0.88
CAST-222ENST00000508579 STK31Q9BXU1 1019 aa9.55□□□□□ -0.88
CAST-222ENST00000508579 TANGO6Q9C0B7 1094 aa9.55□□□□□ -0.88
CAST-222ENST00000508579 BRD8Q9H0E9 1235 aa9.55□□□□□ -0.88
CAST-222ENST00000508579 TMEM165Q9HC07 324 aa9.55□□□□□ -0.88
CAST-222ENST00000508579 KMT5AQ9NQR1 393 aa9.55□□□□□ -0.88
CAST-222ENST00000508579 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.55□□□□□ -0.88
CAST-222ENST00000508579 HDAC9Q9UKV0 1011 aa9.55□□□□□ -0.88
CAST-222ENST00000508579 COL4A3BPQ9Y5P4 624 aa9.55□□□□□ -0.88
CAST-222ENST00000508579 LINC00854A0A1B0GVQ3 168 aa9.55□□□□□ -0.88
CAST-222ENST00000508579 IQCA1LA6NCM1 817 aa9.55□□□□□ -0.88
CAST-222ENST00000508579 RTN2O75298 545 aa9.55□□□□□ -0.88
CAST-222ENST00000508579 ZNF189O75820 626 aaPredicted RBP9.55□□□□□ -0.88
CAST-222ENST00000508579 HSPA1AP0DMV8 641 aaKnown RBP9.55□□□□□ -0.88
CAST-222ENST00000508579 HSPA1BP0DMV9 641 aaKnown RBP9.55□□□□□ -0.88
CAST-222ENST00000508579 RPL13P26373 211 aaKnown RBP9.55□□□□□ -0.88
CAST-222ENST00000508579 HOXC13P31276 330 aa9.55□□□□□ -0.88
CAST-222ENST00000508579 PABPC4Q13310 644 aaKnown RBP eCLIP9.55□□□□□ -0.88
CAST-222ENST00000508579 RASA2Q15283 850 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms