RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 PREPP48147 710 aa7.72□□□□□ -1.17
PDLIM5-211ENST00000508531 ASAP3Q8TDY4 903 aa7.72□□□□□ -1.17
PDLIM5-211ENST00000508531 BSNDQ8WZ55 320 aa7.72□□□□□ -1.17
PDLIM5-211ENST00000508531 RNF208Q9H0X6 261 aa7.72□□□□□ -1.17
PDLIM5-211ENST00000508531 SOX1O00570 391 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-211ENST00000508531 BMP3P12645 472 aa7.71□□□□□ -1.18
PDLIM5-211ENST00000508531 NFIAQ12857 509 aa7.71□□□□□ -1.18
PDLIM5-211ENST00000508531 IKBKEQ14164 716 aa7.71□□□□□ -1.18
PDLIM5-211ENST00000508531 ANKRD34AQ69YU3 496 aa7.71□□□□□ -1.18
PDLIM5-211ENST00000508531 VN1R5Q7Z5H4 357 aa7.71□□□□□ -1.18
PDLIM5-211ENST00000508531 C14orf37Q86TY3 774 aa7.71□□□□□ -1.18
PDLIM5-211ENST00000508531 GJD3Q8N144 294 aa7.71□□□□□ -1.18
PDLIM5-211ENST00000508531 KCNF1Q9H3M0 494 aa7.71□□□□□ -1.18
PDLIM5-211ENST00000508531 AMOTL2Q9Y2J4 779 aa7.71□□□□□ -1.18
PDLIM5-211ENST00000508531 CD97P48960 835 aa7.7□□□□□ -1.18
PDLIM5-211ENST00000508531 PEAR1Q5VY43 1037 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-211ENST00000508531 FDX2Q6P4F2 183 aa7.7□□□□□ -1.18
PDLIM5-211ENST00000508531 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-211ENST00000508531 ZDHHC13Q8IUH4 622 aa7.7□□□□□ -1.18
PDLIM5-211ENST00000508531 FAM20CQ8IXL6 584 aa7.7□□□□□ -1.18
PDLIM5-211ENST00000508531 MED26O95402 600 aa7.69□□□□□ -1.18
PDLIM5-211ENST00000508531 POLR3DP05423 398 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-211ENST00000508531 RNF43Q68DV7 783 aa7.69□□□□□ -1.18
PDLIM5-211ENST00000508531 USP26Q9BXU7 913 aa7.69□□□□□ -1.18
PDLIM5-211ENST00000508531 BHLHE41Q9C0J9 482 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-211ENST00000508531 ZFYVE28Q9HCC9 887 aa7.69□□□□□ -1.18
PDLIM5-211ENST00000508531 METTL12A8MUP2 240 aa7.68□□□□□ -1.18
PDLIM5-211ENST00000508531 COBLO75128 1261 aa7.68□□□□□ -1.18
PDLIM5-211ENST00000508531 BEND4Q6ZU67 534 aa7.68□□□□□ -1.18
PDLIM5-211ENST00000508531 CLEC10AQ8IUN9 316 aa7.68□□□□□ -1.18
PDLIM5-211ENST00000508531 FAM83CQ9BQN1 747 aa7.68□□□□□ -1.18
PDLIM5-211ENST00000508531 DBNDD2Q9BQY9 259 aa7.68□□□□□ -1.18
PDLIM5-211ENST00000508531 MEGF11A6BM72 1044 aa7.67□□□□□ -1.18
PDLIM5-211ENST00000508531 GAS2O43903 313 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-211ENST00000508531 ESRRAP11474 423 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-211ENST00000508531 CCDC180Q9P1Z9 1646 aa7.67□□□□□ -1.18
PDLIM5-211ENST00000508531 LOC100289279A0A1B0GTE1 492 aa7.66□□□□□ -1.18
PDLIM5-211ENST00000508531 NUTM2GQ5VZR2 741 aa7.66□□□□□ -1.18
PDLIM5-211ENST00000508531 KRTAP9-2Q9BYQ4 174 aa7.66□□□□□ -1.18
PDLIM5-211ENST00000508531 HIF3AQ9Y2N7 669 aa7.66□□□□□ -1.18
PDLIM5-211ENST00000508531 KIAA1324LA8MWY0 1029 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-211ENST00000508531 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-211ENST00000508531 H3BRB1 525 aa7.65□□□□□ -1.18
PDLIM5-211ENST00000508531 ICMTO60725 284 aa7.65□□□□□ -1.18
PDLIM5-211ENST00000508531 DLGAP3O95886 979 aa7.65□□□□□ -1.18
PDLIM5-211ENST00000508531 SERPINB4P48594 390 aa7.65□□□□□ -1.18
PDLIM5-211ENST00000508531 GSTM4Q03013 218 aa7.65□□□□□ -1.18
PDLIM5-211ENST00000508531 SGO2Q562F6 1265 aa7.65□□□□□ -1.18
PDLIM5-211ENST00000508531 C12orf50Q8NA57 414 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-211ENST00000508531 SHKBP1Q8TBC3 707 aa7.65□□□□□ -1.18
PDLIM5-211ENST00000508531 TMPRSS13Q9BYE2 586 aa7.65□□□□□ -1.18
PDLIM5-211ENST00000508531 TUT1Q9H6E5 874 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-211ENST00000508531 SOX17Q9H6I2 414 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-211ENST00000508531 EGFL7Q9UHF1 273 aa7.65□□□□□ -1.18
PDLIM5-211ENST00000508531 USTQ9Y2C2 406 aa7.65□□□□□ -1.18
PDLIM5-211ENST00000508531 PRR19A6NJB7 356 aa7.64□□□□□ -1.19
PDLIM5-211ENST00000508531 MAP4P27816 1152 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-211ENST00000508531 GLYCTKQ8IVS8 523 aa7.64□□□□□ -1.19
PDLIM5-211ENST00000508531 CYP4F12Q9HCS2 524 aa7.64□□□□□ -1.19
PDLIM5-211ENST00000508531 BRPF3Q9ULD4 1205 aa7.64□□□□□ -1.19
PDLIM5-211ENST00000508531 KRTAP9-6A0A140TA67 174 aa7.63□□□□□ -1.19
PDLIM5-211ENST00000508531 A0A1W2PP55 124 aa7.63□□□□□ -1.19
PDLIM5-211ENST00000508531 RXRBP28702 533 aa7.63□□□□□ -1.19
PDLIM5-211ENST00000508531 GRIK1P39086 918 aa7.63□□□□□ -1.19
PDLIM5-211ENST00000508531 USPL1Q5W0Q7 1092 aa7.63□□□□□ -1.19
PDLIM5-211ENST00000508531 B4GALNT3Q6L9W6 998 aa7.63□□□□□ -1.19
PDLIM5-211ENST00000508531 GALNT12Q8IXK2 581 aa7.63□□□□□ -1.19
PDLIM5-211ENST00000508531 SMG8Q8ND04 991 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-211ENST00000508531 MFSD14AQ96MC6 490 aa7.63□□□□□ -1.19
PDLIM5-211ENST00000508531 LIN7BQ9HAP6 207 aa7.63□□□□□ -1.19
PDLIM5-211ENST00000508531 A0A096LPE4 126 aa7.62□□□□□ -1.19
PDLIM5-211ENST00000508531 A0A1W2PPZ6 126 aa7.62□□□□□ -1.19
PDLIM5-211ENST00000508531 WDR64B1ANS9 1081 aa7.62□□□□□ -1.19
PDLIM5-211ENST00000508531 TIAF1O95411 115 aa7.62□□□□□ -1.19
PDLIM5-211ENST00000508531 DRD2P14416 443 aa7.62□□□□□ -1.19
PDLIM5-211ENST00000508531 GRIA4P48058 902 aa7.62□□□□□ -1.19
PDLIM5-211ENST00000508531 PCDH1Q08174 1060 aa7.62□□□□□ -1.19
PDLIM5-211ENST00000508531 ECM1Q16610 540 aa7.62□□□□□ -1.19
PDLIM5-211ENST00000508531 SPRED3Q2MJR0 410 aa7.62□□□□□ -1.19
PDLIM5-211ENST00000508531 EXOSC6Q5RKV6 272 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-211ENST00000508531 SPINK2P20155 84 aa7.61□□□□□ -1.19
PDLIM5-211ENST00000508531 INTS5Q6P9B9 1019 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-211ENST00000508531 CCNJLQ8IV13 435 aa7.61□□□□□ -1.19
PDLIM5-211ENST00000508531 TCF12Q99081 682 aa7.61□□□□□ -1.19
PDLIM5-211ENST00000508531 SUGCTQ9HAC7 445 aa7.61□□□□□ -1.19
PDLIM5-211ENST00000508531 RB1CC1Q8TDY2 1594 aa7.6□□□□□ -1.19
PDLIM5-211ENST00000508531 ADAMTS4O75173 837 aa7.6□□□□□ -1.19
PDLIM5-211ENST00000508531 ZNF423Q2M1K9 1284 aa7.6□□□□□ -1.19
PDLIM5-211ENST00000508531 MCTP1Q6DN14 999 aa7.6□□□□□ -1.19
PDLIM5-211ENST00000508531 FBXL6Q8N531 539 aa7.6□□□□□ -1.19
PDLIM5-211ENST00000508531 NRSN2Q9GZP1 204 aa7.6□□□□□ -1.19
PDLIM5-211ENST00000508531 CLEC4MQ9H2X3 399 aaPredicted RBP7.6□□□□□ -1.19
PDLIM5-211ENST00000508531 NDUFB5O43674 189 aa7.59□□□□□ -1.19
PDLIM5-211ENST00000508531 CTSBP07858 339 aa7.59□□□□□ -1.19
PDLIM5-211ENST00000508531 HOXA10P31260 410 aaPredicted RBP7.59□□□□□ -1.19
PDLIM5-211ENST00000508531 USP11P51784 963 aa7.59□□□□□ -1.19
PDLIM5-211ENST00000508531 GP2P55259 537 aaKnown RBP7.59□□□□□ -1.19
PDLIM5-211ENST00000508531 ARHGAP4P98171 946 aa7.59□□□□□ -1.19
PDLIM5-211ENST00000508531 ORC1Q13415 861 aa7.59□□□□□ -1.19
PDLIM5-211ENST00000508531 NFKBIBQ15653 356 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms