RNA–Protein interactions for RNA: ENST00000507855.5

CCDC30-212, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC30, Length 2,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-212ENST00000507855 SVOPQ8N4V2 548 aa4.74□□□□□ -1.65
CCDC30-212ENST00000507855 A0A096LPE4 126 aa4.74□□□□□ -1.65
CCDC30-212ENST00000507855 A0A1W2PPZ6 126 aa4.74□□□□□ -1.65
CCDC30-212ENST00000507855 ARHGEF15O94989 841 aa4.74□□□□□ -1.65
CCDC30-212ENST00000507855 BCRP11274 1271 aa4.74□□□□□ -1.65
CCDC30-212ENST00000507855 ZNF394Q53GI3 561 aa4.74□□□□□ -1.65
CCDC30-212ENST00000507855 GOLGA6L1Q8N7Z2 621 aa4.74□□□□□ -1.65
CCDC30-212ENST00000507855 GALNT11Q8NCW6 608 aa4.74□□□□□ -1.65
CCDC30-212ENST00000507855 PRDM10Q9NQV6 1147 aa4.74□□□□□ -1.65
CCDC30-212ENST00000507855 SHROOM4Q9ULL8 1493 aa4.74□□□□□ -1.65
CCDC30-212ENST00000507855 TMEM238LA0A1B0GVL6 79 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 LINC01387J3KSC0 135 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 DEAF1O75398 565 aaPredicted RBP4.73□□□□□ -1.65
CCDC30-212ENST00000507855 DLGAP3O95886 979 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 GHRHP01286 108 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 CTSBP07858 339 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 NID1P14543 1247 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 DGKGP49619 791 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 HDLBPQ00341 1268 aaKnown RBP4.73□□□□□ -1.65
CCDC30-212ENST00000507855 MAP3K11Q16584 847 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 METTL16Q86W50 562 aaKnown RBP4.73□□□□□ -1.65
CCDC30-212ENST00000507855 DMRTC2Q8IXT2 367 aaPredicted RBP4.73□□□□□ -1.65
CCDC30-212ENST00000507855 TMEM87AQ8NBN3 555 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 SPACA7Q96KW9 195 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 KCNK4Q9NYG8 393 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 TLR6Q9Y2C9 796 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 ENC1O14682 589 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 RGS9O75916 674 aaPredicted RBP4.73□□□□□ -1.65
CCDC30-212ENST00000507855 AMPD1P23109 780 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 FANCCQ00597 558 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 IL22RA1Q8N6P7 574 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 TMEM102Q8N9M5 508 aaPredicted RBP4.73□□□□□ -1.65
CCDC30-212ENST00000507855 SLC7A3Q8WY07 619 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 SECISBP2LQ93073 1101 aaKnown RBP4.73□□□□□ -1.65
CCDC30-212ENST00000507855 ZC3H12CQ9C0D7 883 aaKnown RBP4.73□□□□□ -1.65
CCDC30-212ENST00000507855 BHLHE41Q9C0J9 482 aaPredicted RBP4.73□□□□□ -1.65
CCDC30-212ENST00000507855 AVENQ9NQS1 362 aaPredicted RBP4.73□□□□□ -1.65
CCDC30-212ENST00000507855 SOX13Q9UN79 622 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 CNTNAP5Q8WYK1 1306 aa4.73□□□□□ -1.65
CCDC30-212ENST00000507855 SOX1O00570 391 aaPredicted RBP4.72□□□□□ -1.65
CCDC30-212ENST00000507855 RACK1P63244 317 aaKnown RBP4.72□□□□□ -1.65
CCDC30-212ENST00000507855 ILDR2Q71H61 639 aa4.72□□□□□ -1.65
CCDC30-212ENST00000507855 FBF1Q8TES7 1133 aa4.72□□□□□ -1.65
CCDC30-212ENST00000507855 CHMP4BQ9H444 224 aaKnown RBP4.72□□□□□ -1.65
CCDC30-212ENST00000507855 ZNF576Q9H609 170 aa4.72□□□□□ -1.65
CCDC30-212ENST00000507855 GDF2Q9UK05 429 aaPredicted RBP4.72□□□□□ -1.65
CCDC30-212ENST00000507855 E9PSI1 815 aa4.72□□□□□ -1.65
CCDC30-212ENST00000507855 EIF4BP23588 611 aaKnown RBP4.72□□□□□ -1.65
CCDC30-212ENST00000507855 TNNI2P48788 182 aa4.72□□□□□ -1.65
CCDC30-212ENST00000507855 RAD51AP2Q09MP3 1159 aa4.72□□□□□ -1.65
CCDC30-212ENST00000507855 LINC00114Q6XXX2 140 aa4.72□□□□□ -1.65
CCDC30-212ENST00000507855 GRIN3AQ8TCU5 1115 aa4.72□□□□□ -1.65
CCDC30-212ENST00000507855 MRS2Q9HD23 443 aa4.72□□□□□ -1.65
CCDC30-212ENST00000507855 KCNG1Q9UIX4 513 aa4.72□□□□□ -1.65
CCDC30-212ENST00000507855 ADAM11O75078 769 aa4.71□□□□□ -1.66
CCDC30-212ENST00000507855 PTPN11Q06124 597 aaPredicted RBP4.71□□□□□ -1.66
CCDC30-212ENST00000507855 SHISA2Q6UWI4 295 aa4.71□□□□□ -1.66
CCDC30-212ENST00000507855 DTHD1Q6ZMT9 781 aa4.71□□□□□ -1.66
CCDC30-212ENST00000507855 KLHDC7BQ96G42 594 aa4.71□□□□□ -1.66
CCDC30-212ENST00000507855 PUS7Q96PZ0 661 aaKnown RBP4.71□□□□□ -1.66
CCDC30-212ENST00000507855 RRAGCQ9HB90 399 aa4.71□□□□□ -1.66
CCDC30-212ENST00000507855 SEC31BQ9NQW1 1179 aa4.71□□□□□ -1.66
CCDC30-212ENST00000507855 SPG7Q9UQ90 795 aa4.71□□□□□ -1.66
CCDC30-212ENST00000507855 ITPKAP23677 461 aa4.71□□□□□ -1.66
CCDC30-212ENST00000507855 CDK8P49336 464 aa4.71□□□□□ -1.66
CCDC30-212ENST00000507855 CNPY4Q8N129 248 aa4.71□□□□□ -1.66
CCDC30-212ENST00000507855 PMEPA1Q969W9 287 aa4.71□□□□□ -1.66
CCDC30-212ENST00000507855 WIPF1O43516 503 aa4.7□□□□□ -1.66
CCDC30-212ENST00000507855 LILRB5O75023 590 aa4.7□□□□□ -1.66
CCDC30-212ENST00000507855 WISP1O95388 367 aa4.7□□□□□ -1.66
CCDC30-212ENST00000507855 ESRRAP11474 423 aaPredicted RBP4.7□□□□□ -1.66
CCDC30-212ENST00000507855 SETDB1Q15047 1291 aa4.7□□□□□ -1.66
CCDC30-212ENST00000507855 PRPF40BQ6NWY9 871 aaKnown RBP4.7□□□□□ -1.66
CCDC30-212ENST00000507855 EFCC1Q9HA90 598 aa4.7□□□□□ -1.66
CCDC30-212ENST00000507855 NSFL1CQ9UNZ2 370 aaKnown RBP4.7□□□□□ -1.66
CCDC30-212ENST00000507855 DLL1O00548 723 aa4.7□□□□□ -1.66
CCDC30-212ENST00000507855 COL8A1P27658 744 aa4.7□□□□□ -1.66
CCDC30-212ENST00000507855 GRIK4Q16099 956 aa4.7□□□□□ -1.66
CCDC30-212ENST00000507855 TICAM2Q86XR7 235 aa4.7□□□□□ -1.66
CCDC30-212ENST00000507855 NT5DC4Q86YG4 428 aa4.7□□□□□ -1.66
CCDC30-212ENST00000507855 NEDD1Q8NHV4 660 aa4.7□□□□□ -1.66
CCDC30-212ENST00000507855 BSNDQ8WZ55 320 aa4.7□□□□□ -1.66
CCDC30-212ENST00000507855 WDR89Q96FK6 387 aaPredicted RBP4.7□□□□□ -1.66
CCDC30-212ENST00000507855 CRELD1Q96HD1 420 aa4.7□□□□□ -1.66
CCDC30-212ENST00000507855 FAM8A1Q9UBU6 413 aa4.7□□□□□ -1.66
CCDC30-212ENST00000507855 TTF2Q9UNY4 1162 aaKnown RBP4.7□□□□□ -1.66
CCDC30-212ENST00000507855 USP31Q70CQ4 1352 aa4.69□□□□□ -1.66
CCDC30-212ENST00000507855 SMNDC1O75940 238 aaKnown RBP eCLIP4.69□□□□□ -1.66
CCDC30-212ENST00000507855 SELPP16109 830 aa4.69□□□□□ -1.66
CCDC30-212ENST00000507855 ALAS2P22557 587 aa4.69□□□□□ -1.66
CCDC30-212ENST00000507855 FOXD4L6Q3SYB3 417 aaPredicted RBP4.69□□□□□ -1.66
CCDC30-212ENST00000507855 FOXD4L3Q6VB84 417 aaPredicted RBP4.69□□□□□ -1.66
CCDC30-212ENST00000507855 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.69□□□□□ -1.66
CCDC30-212ENST00000507855 KBTBD4Q9NVX7 518 aa4.69□□□□□ -1.66
CCDC30-212ENST00000507855 PCDHB5Q9Y5E4 795 aa4.69□□□□□ -1.66
CCDC30-212ENST00000507855 MINDY4BA8MYZ0 360 aa4.68□□□□□ -1.66
CCDC30-212ENST00000507855 NLRP12P59046 1061 aa4.68□□□□□ -1.66
CCDC30-212ENST00000507855 PCDH1Q08174 1060 aa4.68□□□□□ -1.66
CCDC30-212ENST00000507855 MSL1Q68DK7 614 aa4.68□□□□□ -1.66
CCDC30-212ENST00000507855 KANK3Q6NY19 840 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms