RNA–Protein interactions for RNA: ENST00000506820.1

AFP-203, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-203ENST00000506820 NXPE3Q969Y0 559 aa6.31□□□□□ -1.4
AFP-203ENST00000506820 TUT1Q9H6E5 874 aaKnown RBP6.31□□□□□ -1.4
AFP-203ENST00000506820 ZFYVE28Q9HCC9 887 aa6.31□□□□□ -1.4
AFP-203ENST00000506820 NACADO15069 1562 aa6.31□□□□□ -1.4
AFP-203ENST00000506820 NLRP12P59046 1061 aa6.3□□□□□ -1.4
AFP-203ENST00000506820 LCE3BQ5TA77 95 aa6.3□□□□□ -1.4
AFP-203ENST00000506820 CITED4Q96RK1 184 aa6.3□□□□□ -1.4
AFP-203ENST00000506820 ZKSCAN3Q9BRR0 538 aa6.3□□□□□ -1.4
AFP-203ENST00000506820 RUSC1Q9BVN2 902 aa6.3□□□□□ -1.4
AFP-203ENST00000506820 ZFYVE1Q9HBF4 777 aa6.3□□□□□ -1.4
AFP-203ENST00000506820 CCDC87Q9NVE4 849 aa6.3□□□□□ -1.4
AFP-203ENST00000506820 KCNK4Q9NYG8 393 aa6.3□□□□□ -1.4
AFP-203ENST00000506820 FOXD3Q9UJU5 478 aaPredicted RBP6.3□□□□□ -1.4
AFP-203ENST00000506820 SOX13Q9UN79 622 aa6.3□□□□□ -1.4
AFP-203ENST00000506820 TRPA1O75762 1119 aa6.29□□□□□ -1.4
AFP-203ENST00000506820 ACPPP15309 386 aa6.29□□□□□ -1.4
AFP-203ENST00000506820 NUTM2GQ5VZR2 741 aa6.29□□□□□ -1.4
AFP-203ENST00000506820 KIAA1211Q6ZU35 1233 aa6.29□□□□□ -1.4
AFP-203ENST00000506820 UBL7Q96S82 380 aaPredicted RBP6.29□□□□□ -1.4
AFP-203ENST00000506820 KCNF1Q9H3M0 494 aa6.29□□□□□ -1.4
AFP-203ENST00000506820 CYP4F12Q9HCS2 524 aa6.29□□□□□ -1.4
AFP-203ENST00000506820 SUPT5HO00267 1087 aaKnown RBP6.28□□□□□ -1.4
AFP-203ENST00000506820 DDX3YO15523 660 aaKnown RBP6.28□□□□□ -1.4
AFP-203ENST00000506820 GAS2O43903 313 aaKnown RBP6.28□□□□□ -1.4
AFP-203ENST00000506820 WISP1O95388 367 aa6.28□□□□□ -1.4
AFP-203ENST00000506820 IGLV1-40P01703 118 aa6.28□□□□□ -1.4
AFP-203ENST00000506820 HP1BP3Q5SSJ5 553 aaPredicted RBP6.28□□□□□ -1.4
AFP-203ENST00000506820 GIMAP7Q8NHV1 300 aa6.28□□□□□ -1.4
AFP-203ENST00000506820 UBASH3BQ8TF42 649 aa6.28□□□□□ -1.4
AFP-203ENST00000506820 BHLHE41Q9C0J9 482 aaPredicted RBP6.28□□□□□ -1.4
AFP-203ENST00000506820 SOX17Q9H6I2 414 aaPredicted RBP6.28□□□□□ -1.4
AFP-203ENST00000506820 HIF3AQ9Y2N7 669 aa6.28□□□□□ -1.4
AFP-203ENST00000506820 RB1CC1Q8TDY2 1594 aa6.27□□□□□ -1.41
AFP-203ENST00000506820 MEGF11A6BM72 1044 aa6.27□□□□□ -1.41
AFP-203ENST00000506820 SOX1O00570 391 aaPredicted RBP6.27□□□□□ -1.41
AFP-203ENST00000506820 GRIK1P39086 918 aa6.27□□□□□ -1.41
AFP-203ENST00000506820 CLEC10AQ8IUN9 316 aa6.27□□□□□ -1.41
AFP-203ENST00000506820 C12orf50Q8NA57 414 aaPredicted RBP6.27□□□□□ -1.41
AFP-203ENST00000506820 FOXD4L4Q8WXT5 416 aaPredicted RBP6.27□□□□□ -1.41
AFP-203ENST00000506820 FAM46AQ96IP4 442 aaKnown RBP6.27□□□□□ -1.41
AFP-203ENST00000506820 MYRFLQ96LU7 910 aa6.27□□□□□ -1.41
AFP-203ENST00000506820 HHIPQ96QV1 700 aa6.27□□□□□ -1.41
AFP-203ENST00000506820 USP26Q9BXU7 913 aa6.27□□□□□ -1.41
AFP-203ENST00000506820 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.27□□□□□ -1.41
AFP-203ENST00000506820 HYAL3O43820 417 aaPredicted RBP6.26□□□□□ -1.41
AFP-203ENST00000506820 ADAM11O75078 769 aa6.26□□□□□ -1.41
AFP-203ENST00000506820 CPNE3O75131 537 aaKnown RBP6.26□□□□□ -1.41
AFP-203ENST00000506820 BMP3P12645 472 aa6.26□□□□□ -1.41
AFP-203ENST00000506820 SERPINB4P48594 390 aa6.26□□□□□ -1.41
AFP-203ENST00000506820 GSTM4Q03013 218 aa6.26□□□□□ -1.41
AFP-203ENST00000506820 ADAMTSL4Q6UY14 1074 aa6.26□□□□□ -1.41
AFP-203ENST00000506820 GALNT12Q8IXK2 581 aa6.26□□□□□ -1.41
AFP-203ENST00000506820 LIN7BQ9HAP6 207 aa6.26□□□□□ -1.41
AFP-203ENST00000506820 PCMTD2Q9NV79 361 aa6.26□□□□□ -1.41
AFP-203ENST00000506820 PPP4R2Q9NY27 417 aa6.26□□□□□ -1.41
AFP-203ENST00000506820 CYP11A1P05108 521 aa6.25□□□□□ -1.41
AFP-203ENST00000506820 POLR3DP05423 398 aaPredicted RBP6.25□□□□□ -1.41
AFP-203ENST00000506820 ESRRAP11474 423 aaPredicted RBP6.25□□□□□ -1.41
AFP-203ENST00000506820 USP11P51784 963 aa6.25□□□□□ -1.41
AFP-203ENST00000506820 HNRNPUQ00839 825 aaKnown RBP eCLIP6.25□□□□□ -1.41
AFP-203ENST00000506820 NFIAQ12857 509 aa6.25□□□□□ -1.41
AFP-203ENST00000506820 EXOSC6Q5RKV6 272 aaKnown RBP6.25□□□□□ -1.41
AFP-203ENST00000506820 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.25□□□□□ -1.41
AFP-203ENST00000506820 VN1R5Q7Z5H4 357 aa6.25□□□□□ -1.41
AFP-203ENST00000506820 FAM20CQ8IXL6 584 aa6.25□□□□□ -1.41
AFP-203ENST00000506820 ARMC10Q8N2F6 343 aa6.25□□□□□ -1.41
AFP-203ENST00000506820 FAM83CQ9BQN1 747 aa6.25□□□□□ -1.41
AFP-203ENST00000506820 YIPF2Q9BWQ6 316 aa6.25□□□□□ -1.41
AFP-203ENST00000506820 EHD4Q9H223 541 aa6.25□□□□□ -1.41
AFP-203ENST00000506820 CLEC4MQ9H2X3 399 aaPredicted RBP6.25□□□□□ -1.41
AFP-203ENST00000506820 A0A096LPE4 126 aa6.24□□□□□ -1.41
AFP-203ENST00000506820 A0A1W2PPZ6 126 aa6.24□□□□□ -1.41
AFP-203ENST00000506820 TM4SF5O14894 197 aa6.24□□□□□ -1.41
AFP-203ENST00000506820 COBLO75128 1261 aa6.24□□□□□ -1.41
AFP-203ENST00000506820 RXRBP28702 533 aa6.24□□□□□ -1.41
AFP-203ENST00000506820 PEAR1Q5VY43 1037 aaPredicted RBP6.24□□□□□ -1.41
AFP-203ENST00000506820 RNF43Q68DV7 783 aa6.24□□□□□ -1.41
AFP-203ENST00000506820 INTS5Q6P9B9 1019 aaKnown RBP6.24□□□□□ -1.41
AFP-203ENST00000506820 BEND4Q6ZU67 534 aa6.24□□□□□ -1.41
AFP-203ENST00000506820 RETREG2Q8NC44 543 aa6.24□□□□□ -1.41
AFP-203ENST00000506820 DMRTB1Q96MA1 342 aa6.24□□□□□ -1.41
AFP-203ENST00000506820 DBNDD2Q9BQY9 259 aa6.24□□□□□ -1.41
AFP-203ENST00000506820 DNAJC25Q9H1X3 360 aa6.24□□□□□ -1.41
AFP-203ENST00000506820 LATS2Q9NRM7 1088 aa6.24□□□□□ -1.41
AFP-203ENST00000506820 A0A1W2PP55 124 aa6.23□□□□□ -1.41
AFP-203ENST00000506820 CCNJLQ8IV13 435 aa6.23□□□□□ -1.41
AFP-203ENST00000506820 TRIM42Q8IWZ5 723 aa6.23□□□□□ -1.41
AFP-203ENST00000506820 SMG8Q8ND04 991 aaKnown RBP6.23□□□□□ -1.41
AFP-203ENST00000506820 KRTAP9-9Q9BYP9 154 aa6.23□□□□□ -1.41
AFP-203ENST00000506820 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
AFP-203ENST00000506820 C7orf69Q9H7B7 122 aa6.23□□□□□ -1.41
AFP-203ENST00000506820 KRTAP4-8A0A0G2JLE6 195 aa6.22□□□□□ -1.41
AFP-203ENST00000506820 HMX2A2RU54 273 aa6.22□□□□□ -1.41
AFP-203ENST00000506820 SSTR4P31391 388 aa6.22□□□□□ -1.41
AFP-203ENST00000506820 PREPP48147 710 aa6.22□□□□□ -1.41
AFP-203ENST00000506820 PCDH1Q08174 1060 aa6.22□□□□□ -1.41
AFP-203ENST00000506820 KIAA0319Q5VV43 1072 aa6.22□□□□□ -1.41
AFP-203ENST00000506820 TXNDC2Q86VQ3 553 aa6.22□□□□□ -1.41
AFP-203ENST00000506820 CORO1BQ9BR76 489 aa6.22□□□□□ -1.41
AFP-203ENST00000506820 TMPRSS13Q9BYE2 586 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms