RNA–Protein interactions for RNA: ENST00000505306.5

ITGA3-204, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 5,479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-204ENST00000505306 GDPD2Q9HCC8 539 aa18.96■□□□□ 0.63
ITGA3-204ENST00000505306 TNNQ9UQP3 1299 aa18.96■□□□□ 0.63
ITGA3-204ENST00000505306 SEPT7Q16181 437 aaKnown RBP18.96■□□□□ 0.63
ITGA3-204ENST00000505306 C16orf45Q96MC5 204 aaPredicted RBP18.96■□□□□ 0.63
ITGA3-204ENST00000505306 TNNT1P13805 278 aa18.95■□□□□ 0.62
ITGA3-204ENST00000505306 LPIN2Q92539 896 aa18.95■□□□□ 0.62
ITGA3-204ENST00000505306 BACH1O14867 736 aa18.95■□□□□ 0.62
ITGA3-204ENST00000505306 PARP1P09874 1014 aaKnown RBP18.95■□□□□ 0.62
ITGA3-204ENST00000505306 TCP10Q12799 353 aa18.95■□□□□ 0.62
ITGA3-204ENST00000505306 TDRD12Q587J7 1177 aaKnown RBP18.95■□□□□ 0.62
ITGA3-204ENST00000505306 CARD10Q9BWT7 1032 aa18.95■□□□□ 0.62
ITGA3-204ENST00000505306 CTAGE5O15320 804 aa18.95■□□□□ 0.62
ITGA3-204ENST00000505306 CALML3P27482 149 aa18.95■□□□□ 0.62
ITGA3-204ENST00000505306 DCTPP1Q9H773 170 aa18.95■□□□□ 0.62
ITGA3-204ENST00000505306 BIN1O00499 593 aa18.95■□□□□ 0.62
ITGA3-204ENST00000505306 LRSAM1Q6UWE0 723 aa18.95■□□□□ 0.62
ITGA3-204ENST00000505306 TMCO3Q6UWJ1 677 aa18.95■□□□□ 0.62
ITGA3-204ENST00000505306 EIF4A1P60842 406 aaKnown RBP18.94■□□□□ 0.62
ITGA3-204ENST00000505306 TNNI3KQ59H18 835 aa18.94■□□□□ 0.62
ITGA3-204ENST00000505306 FPGT-TNNI3KV9GXZ4 949 aa18.94■□□□□ 0.62
ITGA3-204ENST00000505306 GCKRQ14397 625 aa18.94■□□□□ 0.62
ITGA3-204ENST00000505306 CNKSR1Q969H4 720 aa18.94■□□□□ 0.62
ITGA3-204ENST00000505306 EXOC1Q9NV70 894 aa18.94■□□□□ 0.62
ITGA3-204ENST00000505306 USP19O94966 1318 aa18.94■□□□□ 0.62
ITGA3-204ENST00000505306 CCDC102BQ68D86 513 aa18.94■□□□□ 0.62
ITGA3-204ENST00000505306 NOD1Q9Y239 953 aa18.94■□□□□ 0.62
ITGA3-204ENST00000505306 CCDC171Q6TFL3 1326 aa18.94■□□□□ 0.62
ITGA3-204ENST00000505306 KANK3Q6NY19 840 aa18.94■□□□□ 0.62
ITGA3-204ENST00000505306 DBNDD2Q9BQY9 259 aa18.94■□□□□ 0.62
ITGA3-204ENST00000505306 ZKSCAN5Q9Y2L8 839 aa18.94■□□□□ 0.62
ITGA3-204ENST00000505306 NLRP1Q9C000 1473 aa18.94■□□□□ 0.62
ITGA3-204ENST00000505306 ERLIN1O75477 346 aa18.94■□□□□ 0.62
ITGA3-204ENST00000505306 EIF3JO75822 258 aaKnown RBP18.94■□□□□ 0.62
ITGA3-204ENST00000505306 ARMT1Q9H993 441 aa18.94■□□□□ 0.62
ITGA3-204ENST00000505306 AATFQ9NY61 560 aaKnown RBP eCLIP18.94■□□□□ 0.62
ITGA3-204ENST00000505306 ZBTB21Q9ULJ3 1066 aa18.94■□□□□ 0.62
ITGA3-204ENST00000505306 TBC1D22AQ8WUA7 517 aa18.93■□□□□ 0.62
ITGA3-204ENST00000505306 GPCPD1Q9NPB8 672 aa18.93■□□□□ 0.62
ITGA3-204ENST00000505306 KIF2AO00139 706 aaPredicted RBP18.93■□□□□ 0.62
ITGA3-204ENST00000505306 GNA11P29992 359 aa18.93■□□□□ 0.62
ITGA3-204ENST00000505306 USPL1Q5W0Q7 1092 aa18.93■□□□□ 0.62
ITGA3-204ENST00000505306 KIF18AQ8NI77 898 aa18.93■□□□□ 0.62
ITGA3-204ENST00000505306 PLCD4Q9BRC7 762 aa18.93■□□□□ 0.62
ITGA3-204ENST00000505306 ZKSCAN3Q9BRR0 538 aa18.93■□□□□ 0.62
ITGA3-204ENST00000505306 MMRN2Q9H8L6 949 aa18.93■□□□□ 0.62
ITGA3-204ENST00000505306 SEC24BO95487 1268 aa18.93■□□□□ 0.62
ITGA3-204ENST00000505306 GTF2IP78347 998 aa18.93■□□□□ 0.62
ITGA3-204ENST00000505306 CALCOCO1Q9P1Z2 691 aa18.93■□□□□ 0.62
ITGA3-204ENST00000505306 ANKRD62A6NC57 917 aa18.93■□□□□ 0.62
ITGA3-204ENST00000505306 MROH5Q6ZUA9 1318 aa18.92■□□□□ 0.62
ITGA3-204ENST00000505306 TARBP1Q13395 1621 aaKnown RBP18.92■□□□□ 0.62
ITGA3-204ENST00000505306 STAT6P42226 847 aa18.92■□□□□ 0.62
ITGA3-204ENST00000505306 BRDTQ58F21 947 aaPredicted RBP18.92■□□□□ 0.62
ITGA3-204ENST00000505306 SEPT12Q8IYM1 358 aa18.92■□□□□ 0.62
ITGA3-204ENST00000505306 ZSCAN16Q9H4T2 348 aaPredicted RBP18.92■□□□□ 0.62
ITGA3-204ENST00000505306 PHACTR2O75167 634 aa18.92■□□□□ 0.62
ITGA3-204ENST00000505306 USP37Q86T82 979 aa18.92■□□□□ 0.62
ITGA3-204ENST00000505306 CERS3Q8IU89 383 aa18.92■□□□□ 0.62
ITGA3-204ENST00000505306 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.92■□□□□ 0.62
ITGA3-204ENST00000505306 PER1O15534 1290 aaPredicted RBP18.92■□□□□ 0.62
ITGA3-204ENST00000505306 UNC5CLQ8IV45 518 aa18.92■□□□□ 0.62
ITGA3-204ENST00000505306 SUCLG2Q96I99 432 aa18.92■□□□□ 0.62
ITGA3-204ENST00000505306 MACROD2A1Z1Q3 448 aa18.91■□□□□ 0.62
ITGA3-204ENST00000505306 ANAPC15P60006 121 aa18.91■□□□□ 0.62
ITGA3-204ENST00000505306 DDX19AQ9NUU7 478 aaKnown RBP18.91■□□□□ 0.62
ITGA3-204ENST00000505306 TRERF1Q96PN7 1200 aa18.91■□□□□ 0.62
ITGA3-204ENST00000505306 NUP88Q99567 741 aaPredicted RBP18.91■□□□□ 0.62
ITGA3-204ENST00000505306 UVSSAQ2YD98 709 aa18.9■□□□□ 0.62
ITGA3-204ENST00000505306 ZNF830Q96NB3 372 aaPredicted RBP18.9■□□□□ 0.62
ITGA3-204ENST00000505306 CLIP2Q9UDT6 1046 aa18.9■□□□□ 0.62
ITGA3-204ENST00000505306 TOP1P11387 765 aaKnown RBP18.9■□□□□ 0.62
ITGA3-204ENST00000505306 USP48Q86UV5 1035 aa18.9■□□□□ 0.62
ITGA3-204ENST00000505306 FAM114A1Q8IWE2 563 aa18.9■□□□□ 0.62
ITGA3-204ENST00000505306 TTC16Q8NEE8 873 aa18.9■□□□□ 0.62
ITGA3-204ENST00000505306 GPHNQ9NQX3 736 aaPredicted RBP18.9■□□□□ 0.62
ITGA3-204ENST00000505306 GOLGA6L10A6NI86 522 aa18.9■□□□□ 0.62
ITGA3-204ENST00000505306 SFPQP23246 707 aaKnown RBP eCLIP18.9■□□□□ 0.62
ITGA3-204ENST00000505306 TNFAIP1Q13829 316 aa18.9■□□□□ 0.62
ITGA3-204ENST00000505306 HELLSQ9NRZ9 838 aa18.9■□□□□ 0.62
ITGA3-204ENST00000505306 RLBP1P12271 317 aa18.9■□□□□ 0.62
ITGA3-204ENST00000505306 IQCEQ6IPM2 695 aa18.9■□□□□ 0.62
ITGA3-204ENST00000505306 SMCR8Q8TEV9 937 aaPredicted RBP18.9■□□□□ 0.62
ITGA3-204ENST00000505306 SNX21Q969T3 373 aa18.9■□□□□ 0.62
ITGA3-204ENST00000505306 PKD2L1Q9P0L9 805 aa18.9■□□□□ 0.62
ITGA3-204ENST00000505306 CSADQ9Y600 493 aa18.9■□□□□ 0.62
ITGA3-204ENST00000505306 KDM5DQ9BY66 1539 aa18.9■□□□□ 0.62
ITGA3-204ENST00000505306 KRT79Q5XKE5 535 aa18.9■□□□□ 0.62
ITGA3-204ENST00000505306 CPLX3Q8WVH0 158 aa18.9■□□□□ 0.62
ITGA3-204ENST00000505306 CCDC97Q96F63 343 aaPredicted RBP18.9■□□□□ 0.62
ITGA3-204ENST00000505306 TTF2Q9UNY4 1162 aaKnown RBP18.9■□□□□ 0.62
ITGA3-204ENST00000505306 RXRAP19793 462 aa18.89■□□□□ 0.62
ITGA3-204ENST00000505306 NOLC1Q14978 699 aaKnown RBP eCLIP18.89■□□□□ 0.62
ITGA3-204ENST00000505306 CRKLP46109 303 aaKnown RBP18.89■□□□□ 0.61
ITGA3-204ENST00000505306 MFSD14BQ5SR56 506 aa18.89■□□□□ 0.61
ITGA3-204ENST00000505306 MYO5CQ9NQX4 1742 aa18.89■□□□□ 0.61
ITGA3-204ENST00000505306 TMX3Q96JJ7 454 aa18.89■□□□□ 0.61
ITGA3-204ENST00000505306 TRIM75PA6NK02 468 aa18.89■□□□□ 0.61
ITGA3-204ENST00000505306 AFMP43652 599 aa18.89■□□□□ 0.61
ITGA3-204ENST00000505306 IRX3P78415 501 aaPredicted RBP18.89■□□□□ 0.61
ITGA3-204ENST00000505306 ISM2Q6H9L7 571 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms