RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ERVH48-1M5A8F1 160 aa6.49□□□□□ -1.37
NIPBL-204ENST00000504430 IGHDP01880 384 aa6.49□□□□□ -1.37
NIPBL-204ENST00000504430 GEMIN4P57678 1058 aaKnown RBP6.49□□□□□ -1.37
NIPBL-204ENST00000504430 MAP3K10Q02779 954 aa6.49□□□□□ -1.37
NIPBL-204ENST00000504430 TCIRG1Q13488 830 aa6.49□□□□□ -1.37
NIPBL-204ENST00000504430 ANO1Q5XXA6 986 aa6.49□□□□□ -1.37
NIPBL-204ENST00000504430 ISY1Q9ULR0 285 aaKnown RBP6.49□□□□□ -1.37
NIPBL-204ENST00000504430 RBP3P10745 1247 aa6.49□□□□□ -1.37
NIPBL-204ENST00000504430 VARSP26640 1264 aaKnown RBP6.49□□□□□ -1.37
NIPBL-204ENST00000504430 SOX9P48436 509 aa6.49□□□□□ -1.37
NIPBL-204ENST00000504430 GOLM1Q8NBJ4 401 aa6.49□□□□□ -1.37
NIPBL-204ENST00000504430 KCNH8Q96L42 1107 aa6.49□□□□□ -1.37
NIPBL-204ENST00000504430 NELL2Q99435 816 aa6.49□□□□□ -1.37
NIPBL-204ENST00000504430 C9orf78Q9NZ63 289 aaPredicted RBP6.49□□□□□ -1.37
NIPBL-204ENST00000504430 A0A087X0B3 334 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 ACTN4O43707 911 aaKnown RBP6.48□□□□□ -1.37
NIPBL-204ENST00000504430 KMT5BQ4FZB7 885 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 TREML1Q86YW5 311 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 IFNL3Q8IZI9 196 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 RSPH1Q8WYR4 309 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 SRRTQ9BXP5 876 aaKnown RBP6.48□□□□□ -1.37
NIPBL-204ENST00000504430 SCHIP1Q9P0W5 487 aaPredicted RBP6.48□□□□□ -1.37
NIPBL-204ENST00000504430 FAM8A1Q9UBU6 413 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 MYL3P08590 195 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 COL6A1P12109 1028 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 STAT3P40763 770 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 APOBRQ0VD83 1088 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 SEZ6Q53EL9 994 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 PRPF40BQ6NWY9 871 aaKnown RBP6.48□□□□□ -1.37
NIPBL-204ENST00000504430 PDXDC1Q6P996 788 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 RUFY4Q6ZNE9 571 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 NYAP1Q6ZVC0 841 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 ABTB2Q8N961 1025 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 TRIM8Q9BZR9 551 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 A6NCN8 305 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 TLL1O43897 1013 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 TNFRSF21O75509 655 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 MYCP01106 439 aaPredicted RBP6.48□□□□□ -1.37
NIPBL-204ENST00000504430 INHAP05111 366 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 EPHB1P54762 984 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 C2orf27AQ580R0 203 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 C16orf54Q6UWD8 224 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 ZNF232Q9UNY5 417 aa6.48□□□□□ -1.37
NIPBL-204ENST00000504430 GJB6O95452 261 aa6.47□□□□□ -1.37
NIPBL-204ENST00000504430 AGR2O95994 175 aa6.47□□□□□ -1.37
NIPBL-204ENST00000504430 CALRP27797 417 aaKnown RBP6.47□□□□□ -1.37
NIPBL-204ENST00000504430 ITGAEP38570 1179 aa6.47□□□□□ -1.37
NIPBL-204ENST00000504430 FAM98CQ17RN3 349 aaKnown RBP6.47□□□□□ -1.37
NIPBL-204ENST00000504430 ALDH16A1Q8IZ83 802 aa6.47□□□□□ -1.37
NIPBL-204ENST00000504430 CCDC89Q8N998 374 aa6.47□□□□□ -1.37
NIPBL-204ENST00000504430 ANKRD42Q8N9B4 389 aa6.47□□□□□ -1.37
NIPBL-204ENST00000504430 IFT43Q96FT9 208 aa6.47□□□□□ -1.37
NIPBL-204ENST00000504430 EIF2AK1Q9BQI3 630 aaKnown RBP6.47□□□□□ -1.37
NIPBL-204ENST00000504430 LATS2Q9NRM7 1088 aa6.47□□□□□ -1.37
NIPBL-204ENST00000504430 IPPQ9Y573 584 aa6.47□□□□□ -1.37
NIPBL-204ENST00000504430 PCDHGB3Q9Y5G1 929 aa6.47□□□□□ -1.37
NIPBL-204ENST00000504430 ZPR1O75312 459 aa6.47□□□□□ -1.37
NIPBL-204ENST00000504430 VDRP11473 427 aa6.47□□□□□ -1.37
NIPBL-204ENST00000504430 PCNX4Q63HM2 1172 aa6.47□□□□□ -1.37
NIPBL-204ENST00000504430 PARD3BQ8TEW8 1205 aa6.47□□□□□ -1.37
NIPBL-204ENST00000504430 SAGE1Q9NXZ1 904 aa6.47□□□□□ -1.37
NIPBL-204ENST00000504430 ITKQ08881 620 aa6.46□□□□□ -1.37
NIPBL-204ENST00000504430 SSRP1Q08945 709 aaKnown RBP6.46□□□□□ -1.37
NIPBL-204ENST00000504430 LMBRD2Q68DH5 695 aaPredicted RBP6.46□□□□□ -1.37
NIPBL-204ENST00000504430 MRM1Q6IN84 353 aaKnown RBP6.46□□□□□ -1.37
NIPBL-204ENST00000504430 YIPF4Q9BSR8 244 aa6.46□□□□□ -1.37
NIPBL-204ENST00000504430 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.46□□□□□ -1.37
NIPBL-204ENST00000504430 FAM50BQ9Y247 325 aa6.46□□□□□ -1.37
NIPBL-204ENST00000504430 BCS1LQ9Y276 419 aa6.46□□□□□ -1.37
NIPBL-204ENST00000504430 TMEM238LA0A1B0GVL6 79 aa6.46□□□□□ -1.38
NIPBL-204ENST00000504430 DDAH1O94760 285 aa6.46□□□□□ -1.38
NIPBL-204ENST00000504430 RAPGEF3O95398 923 aa6.46□□□□□ -1.38
NIPBL-204ENST00000504430 F2P00734 622 aa6.46□□□□□ -1.38
NIPBL-204ENST00000504430 STRN3Q13033 797 aa6.46□□□□□ -1.38
NIPBL-204ENST00000504430 C6orf15Q6UXA7 325 aaPredicted RBP6.46□□□□□ -1.38
NIPBL-204ENST00000504430 NGRNQ9NPE2 291 aaKnown RBP6.46□□□□□ -1.38
NIPBL-204ENST00000504430 ANAPC4Q9UJX5 808 aa6.46□□□□□ -1.38
NIPBL-204ENST00000504430 CCDC163A0A0D9SF12 145 aa6.46□□□□□ -1.38
NIPBL-204ENST00000504430 ZRANB2O95218 330 aaKnown RBP eCLIP6.46□□□□□ -1.38
NIPBL-204ENST00000504430 TCEA2Q15560 299 aa6.46□□□□□ -1.38
NIPBL-204ENST00000504430 HDGFL2Q7Z4V5 671 aaPredicted RBP6.46□□□□□ -1.38
NIPBL-204ENST00000504430 TPH2Q8IWU9 490 aa6.46□□□□□ -1.38
NIPBL-204ENST00000504430 NIM1KQ8IY84 436 aa6.46□□□□□ -1.38
NIPBL-204ENST00000504430 COG1Q8WTW3 980 aa6.46□□□□□ -1.38
NIPBL-204ENST00000504430 TTC36A6NLP5 189 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 GADD45BO75293 160 aaPredicted RBP6.45□□□□□ -1.38
NIPBL-204ENST00000504430 PF4P02776 101 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 DMRTA1Q5VZB9 504 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 POTEEQ6S8J3 1075 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 CLASRPQ8N2M8 674 aaKnown RBP6.45□□□□□ -1.38
NIPBL-204ENST00000504430 CHAC2Q8WUX2 184 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 RABGEF1Q9UJ41 708 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 VSTM5A8MXK1 200 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 DXOO77932 396 aaKnown RBP6.45□□□□□ -1.38
NIPBL-204ENST00000504430 L1CAMP32004 1257 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 ADD2P35612 726 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 RNF180Q86T96 592 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 ARMC2Q8NEN0 867 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 IFT122Q9HBG6 1241 aa6.45□□□□□ -1.38
NIPBL-204ENST00000504430 RHOBTB3O94955 611 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms