RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 CHST3Q7LGC8 479 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 BICC1Q9H694 974 aaKnown RBP8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 NSFL1CQ9UNZ2 370 aaKnown RBP8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 SPECC1LQ69YQ0 1117 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 CCDC50Q8IVM0 306 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 DCAF5Q96JK2 942 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 YTHDC2Q9H6S0 1430 aaKnown RBP8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 BICDL2A1A5D9 508 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 TRIM75PA6NK02 468 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 TCHPQ9BT92 498 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 ZSWIM4Q9H7M6 989 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 PRAG1Q86YV5 1406 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 AKNAD1Q5T1N1 836 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 DNAJC5BQ9UF47 199 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 DENND2AQ9ULE3 1009 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 GJA3Q9Y6H8 435 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 HOXC9P31274 260 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 SPAG1Q07617 926 aa8.14□□□□□ -1.11
SYNPO2-205ENST00000504178 CREB3L3Q68CJ9 461 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 NAP1L4Q99733 375 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 PAXBP1Q9Y5B6 917 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 ATP10BO94823 1461 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 RRP9O43818 475 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 ARID5AQ03989 594 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 C6orf163Q5TEZ5 329 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 TICAM2Q86XR7 235 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 LMBR1Q8WVP7 490 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 PAIP2Q9BPZ3 127 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 PRDM10Q9NQV6 1147 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 SPTLC2O15270 562 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 HCLS1P14317 486 aaPredicted RBP8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 PTGS1P23219 599 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 ARL1P40616 181 aaPredicted RBP8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 KLHL40Q2TBA0 621 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 IQCGQ9H095 443 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 GNA11P29992 359 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 SP4Q02446 784 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 UBXN1Q04323 297 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 CEP85Q6P2H3 762 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 NEK11Q8NG66 645 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 SH2D4AQ9H788 454 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 BTG4Q9NY30 223 aa8.13□□□□□ -1.11
SYNPO2-205ENST00000504178 TACC1O75410 805 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 UFL1O94874 794 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 DNM1Q05193 864 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 RUFY3Q7L099 469 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 MSANTD4Q8NCY6 345 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 LINS1Q8NG48 757 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 FAM107BQ9H098 131 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 HELLSQ9NRZ9 838 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 PKD2L1Q9P0L9 805 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 POLKQ9UBT6 870 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 CTAGE15A4D2H0 777 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 CTAGE8P0CG41 777 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 RXRAP19793 462 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 RAB3GAP1Q15042 981 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 CTAGE6Q86UF2 777 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 CTAGE4Q8IX94 777 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 PLIN2Q99541 437 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 TMOD4Q9NZQ9 345 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 APBB1IPQ7Z5R6 666 aaPredicted RBP8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 CNBD1Q8NA66 436 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 ZKSCAN3Q9BRR0 538 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 DNAJC25Q9H1X3 360 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 STK32BQ9NY57 414 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 MBD4O95243 580 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 C19orf44Q9H6X5 657 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 PICK1Q9NRD5 415 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 KIAA0556O60303 1618 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 PTPDC1A2A3K4 754 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 BACH1O14867 736 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 KIF4AO95239 1232 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 AK2P54819 239 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 TAF12Q16514 161 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 DTHD1Q6ZMT9 781 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 NSRP1Q9H0G5 558 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 GPCPD1Q9NPB8 672 aa8.12□□□□□ -1.11
SYNPO2-205ENST00000504178 SYT1P21579 422 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 TEX11Q8IYF3 940 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 CCDC63Q8NA47 563 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 RNF216Q9NWF9 866 aaPredicted RBP8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 CCNL1Q9UK58 526 aaPredicted RBP8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 POLR3AO14802 1390 aaPredicted RBP8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 KRT83P78385 493 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 DACT1Q9NYF0 836 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 BIN2Q9UBW5 565 aaPredicted RBP8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 RAD50Q92878 1312 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 TTC6Q86TZ1 520 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 ZNF830Q96NB3 372 aaPredicted RBP8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 PUS7Q96PZ0 661 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 GTPBP4Q9BZE4 634 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 PCDHB15Q9Y5E8 787 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 CTAGE9A4FU28 777 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 ITGA6P23229 1130 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 IP6K1Q92551 441 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 EYA1Q99502 592 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 CEP83Q9Y592 693 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 A0A1W2PP64 1363 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 GCP02774 474 aa8.11□□□□□ -1.11
SYNPO2-205ENST00000504178 GTF2F1P35269 517 aaKnown RBP eCLIP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms