RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 GRIN2CQ14957 1233 aa1.8□□□□□ -2.12
XRN1-214ENST00000498077 RANBP10Q6VN20 620 aa1.8□□□□□ -2.12
XRN1-214ENST00000498077 SCUBE3Q8IX30 993 aa1.8□□□□□ -2.12
XRN1-214ENST00000498077 PGBD3Q8N328 593 aa1.8□□□□□ -2.12
XRN1-214ENST00000498077 FANK1Q8TC84 345 aa1.8□□□□□ -2.12
XRN1-214ENST00000498077 ATP8B4Q8TF62 1192 aa1.8□□□□□ -2.12
XRN1-214ENST00000498077 CWC15Q9P013 229 aaKnown RBP1.8□□□□□ -2.12
XRN1-214ENST00000498077 DIDO1Q9BTC0 2240 aaKnown RBP1.8□□□□□ -2.12
XRN1-214ENST00000498077 PNPLA6Q8IY17 1366 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 ARHGAP35Q9NRY4 1499 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 HECW1Q76N89 1606 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.79□□□□□ -2.12
XRN1-214ENST00000498077 SUV39H1O43463 412 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 SDHBP21912 280 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 GRM5P41594 1212 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 GALK1P51570 392 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 SP3Q02447 781 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 DGKZQ13574 1117 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 ST3GAL2Q16842 350 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 GNASQ5JWF2 1037 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 MORN1Q5T089 497 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 CCDC102BQ68D86 513 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 CADPS2Q86UW7 1296 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 CEP57L1Q8IYX8 460 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 C8orf37Q96NL8 207 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 KNSTRNQ9Y448 316 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 ITSN2Q9NZM3 1697 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 UGGT1Q9NYU2 1555 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 PPIP5K1Q6PFW1 1433 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 KIAA1107Q9UPP5 1409 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 ENO4A6NNW6 628 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 RNGTTO60942 597 aaKnown RBP1.79□□□□□ -2.12
XRN1-214ENST00000498077 PRAMEF1O95521 474 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 S1PR4O95977 384 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 CT47B1P0C2W7 299 aaPredicted RBP1.79□□□□□ -2.12
XRN1-214ENST00000498077 HIF1AQ16665 826 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 ZNF800Q2TB10 664 aaPredicted RBP eCLIP1.79□□□□□ -2.12
XRN1-214ENST00000498077 TREML4Q6UXN2 200 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 RAB44Q7Z6P3 723 aaPredicted RBP1.79□□□□□ -2.12
XRN1-214ENST00000498077 CDH24Q86UP0 819 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 EXOC3L1Q86VI1 746 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 SLC34A3Q8N130 599 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 CHDHQ8NE62 594 aaPredicted RBP1.79□□□□□ -2.12
XRN1-214ENST00000498077 ZSWIM4Q9H7M6 989 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 GOLGA2P5Q9HBQ8 144 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 MAP3K20Q9NYL2 800 aaKnown RBP1.79□□□□□ -2.12
XRN1-214ENST00000498077 MALT1Q9UDY8 824 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 GPSM3Q9Y4H4 160 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 ALDH1A1P00352 501 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 IL32P24001 234 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 ELF1P32519 619 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 IRAK1BP1Q5VVH5 260 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 PHLDB3Q6NSJ2 640 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 TP53INP2Q8IXH6 220 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 EXOC8Q8IYI6 725 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 IL22RA2Q969J5 263 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 TSEN34Q9BSV6 310 aaKnown RBP1.79□□□□□ -2.12
XRN1-214ENST00000498077 DHX36Q9H2U1 1008 aaKnown RBP1.79□□□□□ -2.12
XRN1-214ENST00000498077 C3orf14Q9HBI5 128 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 PCDHGC4Q9Y5F7 938 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 ABCC1P33527 1531 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 CHD8Q9HCK8 2581 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 PDXKO00764 312 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 RFPL1O75677 317 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 PDE9AO76083 593 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 XBP1P17861 261 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 MDM2Q00987 491 aaPredicted RBP1.79□□□□□ -2.12
XRN1-214ENST00000498077 PLEKHN1Q494U1 663 aaPredicted RBP1.79□□□□□ -2.12
XRN1-214ENST00000498077 PPP2R2DQ66LE6 453 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 WWC2Q6AWC2 1192 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 DESI1Q6ICB0 168 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 SNRNP48Q6IEG0 339 aaKnown RBP1.79□□□□□ -2.12
XRN1-214ENST00000498077 GPAT2Q6NUI2 795 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 BRICD5Q6PL45 260 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 ERICH6Q7L0X2 663 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 RIC3Q7Z5B4 369 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 CDK20Q8IZL9 346 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 MSL3Q8N5Y2 521 aaKnown RBP1.79□□□□□ -2.12
XRN1-214ENST00000498077 PRIMPOLQ96LW4 560 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 MYO6Q9UM54 1294 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 PCDHB11Q9Y5F2 797 aa1.79□□□□□ -2.12
XRN1-214ENST00000498077 CCDC144AA2RUR9 1427 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 LAMB2P55268 1798 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 TLR2O60603 784 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 GIPP09681 153 aaPredicted RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 SSTR3P32745 418 aaPredicted RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 RBMXP38159 391 aaKnown RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 CCT2P78371 535 aaKnown RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 PMPCAQ10713 525 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 MAP9Q49MG5 647 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 C14orf28Q4W4Y0 310 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 PRAMEF13Q5VWM6 474 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 STK32CQ86UX6 486 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 ZFPM1Q8IX07 1006 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 ZNF419Q96HQ0 510 aaPredicted RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 HINFPQ9BQA5 517 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 PCMTD2Q9NV79 361 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 RBM28Q9NW13 759 aaKnown RBP1.78□□□□□ -2.12
XRN1-214ENST00000498077 PRR12Q9ULL5 1215 aa1.78□□□□□ -2.12
XRN1-214ENST00000498077 PCDHB9Q9Y5E1 797 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms