RNA–Protein interactions for RNA: ENST00000494647.2

NDFIP2-204, Transcript of Nedd4 family interacting protein 2, humanhuman

TSL 5

Gene NDFIP2, Length 344 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-204ENST00000494647 SOX13Q9UN79 622 aa6.7□□□□□ -1.34
NDFIP2-204ENST00000494647 ARL4DP49703 201 aa6.69□□□□□ -1.34
NDFIP2-204ENST00000494647 NLRP12P59046 1061 aa6.69□□□□□ -1.34
NDFIP2-204ENST00000494647 KIAA1211Q6ZU35 1233 aa6.69□□□□□ -1.34
NDFIP2-204ENST00000494647 RETREG2Q8NC44 543 aa6.69□□□□□ -1.34
NDFIP2-204ENST00000494647 ASAP3Q8TDY4 903 aa6.69□□□□□ -1.34
NDFIP2-204ENST00000494647 SMARCA4P51532 1647 aa6.68□□□□□ -1.34
NDFIP2-204ENST00000494647 KIF21AQ7Z4S6 1674 aa6.68□□□□□ -1.34
NDFIP2-204ENST00000494647 NDUFB5O43674 189 aa6.68□□□□□ -1.34
NDFIP2-204ENST00000494647 PDE4CQ08493 712 aa6.68□□□□□ -1.34
NDFIP2-204ENST00000494647 C19orf57Q0VDD7 668 aa6.68□□□□□ -1.34
NDFIP2-204ENST00000494647 IKBKEQ14164 716 aa6.68□□□□□ -1.34
NDFIP2-204ENST00000494647 UVSSAQ2YD98 709 aa6.68□□□□□ -1.34
NDFIP2-204ENST00000494647 ARTNQ5T4W7 220 aa6.68□□□□□ -1.34
NDFIP2-204ENST00000494647 UTP4Q969X6 686 aaKnown RBP6.68□□□□□ -1.34
NDFIP2-204ENST00000494647 UBL7Q96S82 380 aaPredicted RBP6.68□□□□□ -1.34
NDFIP2-204ENST00000494647 BHLHE41Q9C0J9 482 aaPredicted RBP6.68□□□□□ -1.34
NDFIP2-204ENST00000494647 ZFYVE28Q9HCC9 887 aa6.68□□□□□ -1.34
NDFIP2-204ENST00000494647 ZFP64Q9NPA5 681 aa6.68□□□□□ -1.34
NDFIP2-204ENST00000494647 LATS2Q9NRM7 1088 aa6.68□□□□□ -1.34
NDFIP2-204ENST00000494647 DHX15O43143 795 aaKnown RBP6.67□□□□□ -1.34
NDFIP2-204ENST00000494647 FSTP19883 344 aa6.67□□□□□ -1.34
NDFIP2-204ENST00000494647 LRP8Q14114 963 aa6.67□□□□□ -1.34
NDFIP2-204ENST00000494647 PEAR1Q5VY43 1037 aaPredicted RBP6.67□□□□□ -1.34
NDFIP2-204ENST00000494647 RAXQ9Y2V3 346 aa6.67□□□□□ -1.34
NDFIP2-204ENST00000494647 POLR3DP05423 398 aaPredicted RBP6.66□□□□□ -1.34
NDFIP2-204ENST00000494647 ARHGAP4P98171 946 aa6.66□□□□□ -1.34
NDFIP2-204ENST00000494647 VN1R5Q7Z5H4 357 aa6.66□□□□□ -1.34
NDFIP2-204ENST00000494647 RUSC1Q9BVN2 902 aa6.66□□□□□ -1.34
NDFIP2-204ENST00000494647 RNF208Q9H0X6 261 aa6.66□□□□□ -1.34
NDFIP2-204ENST00000494647 STOML1Q9UBI4 398 aa6.66□□□□□ -1.34
NDFIP2-204ENST00000494647 BAZ1BQ9UIG0 1483 aaKnown RBP6.66□□□□□ -1.34
NDFIP2-204ENST00000494647 HMGXB3Q12766 1538 aa6.66□□□□□ -1.34
NDFIP2-204ENST00000494647 GSC2O15499 205 aa6.65□□□□□ -1.34
NDFIP2-204ENST00000494647 SART1O43290 800 aaKnown RBP6.65□□□□□ -1.34
NDFIP2-204ENST00000494647 NEFLP07196 543 aa6.65□□□□□ -1.34
NDFIP2-204ENST00000494647 PDE3BQ13370 1112 aa6.65□□□□□ -1.34
NDFIP2-204ENST00000494647 HGSNATQ68CP4 663 aa6.65□□□□□ -1.34
NDFIP2-204ENST00000494647 ANKRD34AQ69YU3 496 aa6.65□□□□□ -1.34
NDFIP2-204ENST00000494647 FDX2Q6P4F2 183 aa6.65□□□□□ -1.34
NDFIP2-204ENST00000494647 SLC51AQ86UW1 340 aa6.65□□□□□ -1.34
NDFIP2-204ENST00000494647 ARMC10Q8N2F6 343 aa6.65□□□□□ -1.34
NDFIP2-204ENST00000494647 FAM46AQ96IP4 442 aaKnown RBP6.65□□□□□ -1.34
NDFIP2-204ENST00000494647 RNF112Q9ULX5 631 aa6.65□□□□□ -1.34
NDFIP2-204ENST00000494647 METTL12A8MUP2 240 aa6.64□□□□□ -1.35
NDFIP2-204ENST00000494647 SOX1O00570 391 aaPredicted RBP6.64□□□□□ -1.35
NDFIP2-204ENST00000494647 ECM1Q16610 540 aa6.64□□□□□ -1.35
NDFIP2-204ENST00000494647 NBPF11Q86T75 865 aa6.64□□□□□ -1.35
NDFIP2-204ENST00000494647 TXNDC2Q86VQ3 553 aa6.64□□□□□ -1.35
NDFIP2-204ENST00000494647 GALNT12Q8IXK2 581 aa6.64□□□□□ -1.35
NDFIP2-204ENST00000494647 CCER1Q8TC90 406 aaPredicted RBP6.64□□□□□ -1.35
NDFIP2-204ENST00000494647 MYRFLQ96LU7 910 aa6.64□□□□□ -1.35
NDFIP2-204ENST00000494647 USP26Q9BXU7 913 aa6.64□□□□□ -1.35
NDFIP2-204ENST00000494647 SOX17Q9H6I2 414 aaPredicted RBP6.64□□□□□ -1.35
NDFIP2-204ENST00000494647 ESRRAP11474 423 aaPredicted RBP6.63□□□□□ -1.35
NDFIP2-204ENST00000494647 PREPP48147 710 aa6.63□□□□□ -1.35
NDFIP2-204ENST00000494647 TMC1Q8TDI8 760 aa6.63□□□□□ -1.35
NDFIP2-204ENST00000494647 LIN7BQ9HAP6 207 aa6.63□□□□□ -1.35
NDFIP2-204ENST00000494647 TIMELESSQ9UNS1 1208 aa6.63□□□□□ -1.35
NDFIP2-204ENST00000494647 MROH2BQ7Z745 1585 aa6.62□□□□□ -1.35
NDFIP2-204ENST00000494647 A0A1W2PP55 124 aa6.62□□□□□ -1.35
NDFIP2-204ENST00000494647 GAS2O43903 313 aaKnown RBP6.62□□□□□ -1.35
NDFIP2-204ENST00000494647 IGLV1-40P01703 118 aa6.62□□□□□ -1.35
NDFIP2-204ENST00000494647 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.62□□□□□ -1.35
NDFIP2-204ENST00000494647 CCNJLQ8IV13 435 aa6.62□□□□□ -1.35
NDFIP2-204ENST00000494647 CITED4Q96RK1 184 aa6.62□□□□□ -1.35
NDFIP2-204ENST00000494647 FAM129BQ96TA1 746 aa6.62□□□□□ -1.35
NDFIP2-204ENST00000494647 A0A096LPE4 126 aa6.61□□□□□ -1.35
NDFIP2-204ENST00000494647 LOC100289279A0A1B0GTE1 492 aa6.61□□□□□ -1.35
NDFIP2-204ENST00000494647 A0A1W2PPZ6 126 aa6.61□□□□□ -1.35
NDFIP2-204ENST00000494647 HYAL3O43820 417 aaPredicted RBP6.61□□□□□ -1.35
NDFIP2-204ENST00000494647 EIF4EBP3O60516 100 aaPredicted RBP6.61□□□□□ -1.35
NDFIP2-204ENST00000494647 CPNE3O75131 537 aaKnown RBP6.61□□□□□ -1.35
NDFIP2-204ENST00000494647 BMP3P12645 472 aa6.61□□□□□ -1.35
NDFIP2-204ENST00000494647 GSTM4Q03013 218 aa6.61□□□□□ -1.35
NDFIP2-204ENST00000494647 ORC1Q13415 861 aa6.61□□□□□ -1.35
NDFIP2-204ENST00000494647 NUTM2GQ5VZR2 741 aa6.61□□□□□ -1.35
NDFIP2-204ENST00000494647 USPL1Q5W0Q7 1092 aa6.61□□□□□ -1.35
NDFIP2-204ENST00000494647 FAM20CQ8IXL6 584 aa6.61□□□□□ -1.35
NDFIP2-204ENST00000494647 KCNF1Q9H3M0 494 aa6.61□□□□□ -1.35
NDFIP2-204ENST00000494647 C7orf69Q9H7B7 122 aa6.61□□□□□ -1.35
NDFIP2-204ENST00000494647 HIF3AQ9Y2N7 669 aa6.61□□□□□ -1.35
NDFIP2-204ENST00000494647 MEGF11A6BM72 1044 aa6.6□□□□□ -1.35
NDFIP2-204ENST00000494647 PCDH1Q08174 1060 aa6.6□□□□□ -1.35
NDFIP2-204ENST00000494647 NFIAQ12857 509 aa6.6□□□□□ -1.35
NDFIP2-204ENST00000494647 TRIM42Q8IWZ5 723 aa6.6□□□□□ -1.35
NDFIP2-204ENST00000494647 TCF12Q99081 682 aa6.6□□□□□ -1.35
NDFIP2-204ENST00000494647 EHD4Q9H223 541 aa6.6□□□□□ -1.35
NDFIP2-204ENST00000494647 CLEC4MQ9H2X3 399 aaPredicted RBP6.6□□□□□ -1.35
NDFIP2-204ENST00000494647 CYP4F12Q9HCS2 524 aa6.6□□□□□ -1.35
NDFIP2-204ENST00000494647 NPHS2Q9NP85 383 aa6.6□□□□□ -1.35
NDFIP2-204ENST00000494647 LAMC3Q9Y6N6 1575 aa6.6□□□□□ -1.35
NDFIP2-204ENST00000494647 HMX2A2RU54 273 aa6.59□□□□□ -1.35
NDFIP2-204ENST00000494647 GPR182O15218 404 aa6.59□□□□□ -1.35
NDFIP2-204ENST00000494647 GRIA4P48058 902 aa6.59□□□□□ -1.35
NDFIP2-204ENST00000494647 SPRED3Q2MJR0 410 aa6.59□□□□□ -1.35
NDFIP2-204ENST00000494647 BEND4Q6ZU67 534 aa6.59□□□□□ -1.35
NDFIP2-204ENST00000494647 CLEC10AQ8IUN9 316 aa6.59□□□□□ -1.35
NDFIP2-204ENST00000494647 DBNDD2Q9BQY9 259 aa6.59□□□□□ -1.35
NDFIP2-204ENST00000494647 TMPRSS13Q9BYE2 586 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms