RNA–Protein interactions for RNA: ENST00000494647.2

NDFIP2-204, Transcript of Nedd4 family interacting protein 2, humanhuman

TSL 5

Gene NDFIP2, Length 344 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-204ENST00000494647 AEBP2Q6ZN18 517 aaPredicted RBP22.14■■□□□ 1.13
NDFIP2-204ENST00000494647 CHIC1Q5VXU3 224 aa21.34■■□□□ 1.01
NDFIP2-204ENST00000494647 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
NDFIP2-204ENST00000494647 PHF23Q9BUL5 403 aaPredicted RBP18.7■□□□□ 0.58
NDFIP2-204ENST00000494647 FOXD1Q16676 465 aa17.54■□□□□ 0.4
NDFIP2-204ENST00000494647 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
NDFIP2-204ENST00000494647 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
NDFIP2-204ENST00000494647 ADRA2BP18089 450 aa16.59■□□□□ 0.25
NDFIP2-204ENST00000494647 PIAS4Q8N2W9 510 aaPredicted RBP16.5■□□□□ 0.23
NDFIP2-204ENST00000494647 MSH5O43196 834 aa16.34■□□□□ 0.21
NDFIP2-204ENST00000494647 POTEDQ86YR6 584 aa15.39■□□□□ 0.05
NDFIP2-204ENST00000494647 SCAF1Q9H7N4 1312 aaKnown RBP15.23■□□□□ 0.03
NDFIP2-204ENST00000494647 MAPK8IP2Q13387 824 aaPredicted RBP15.14■□□□□ 0.01
NDFIP2-204ENST00000494647 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
NDFIP2-204ENST00000494647 DMRT2Q9Y5R5 561 aa15□□□□□ -0.01
NDFIP2-204ENST00000494647 CNKSR2Q8WXI2 1034 aa14.77□□□□□ -0.05
NDFIP2-204ENST00000494647 NCBP3Q53F19 620 aaKnown RBP14.66□□□□□ -0.06
NDFIP2-204ENST00000494647 HOXD11P31277 338 aaPredicted RBP14.56□□□□□ -0.08
NDFIP2-204ENST00000494647 RNF216Q9NWF9 866 aaPredicted RBP14.56□□□□□ -0.08
NDFIP2-204ENST00000494647 DCAF8L1A6NGE4 600 aa14.43□□□□□ -0.1
NDFIP2-204ENST00000494647 NPM3O75607 178 aaKnown RBP14.41□□□□□ -0.1
NDFIP2-204ENST00000494647 KCNA4P22459 653 aa14.41□□□□□ -0.1
NDFIP2-204ENST00000494647 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
NDFIP2-204ENST00000494647 RNF39Q9H2S5 420 aa13.94□□□□□ -0.18
NDFIP2-204ENST00000494647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.92□□□□□ -0.183e-6■□□□□ 9
NDFIP2-204ENST00000494647 CACNB1Q02641 598 aaPredicted RBP13.83□□□□□ -0.2
NDFIP2-204ENST00000494647 C1QBPQ07021 282 aaKnown RBP13.77□□□□□ -0.21
NDFIP2-204ENST00000494647 SLC4A1APQ9BWU0 796 aaKnown RBP13.68□□□□□ -0.22
NDFIP2-204ENST00000494647 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
NDFIP2-204ENST00000494647 U3KPZ7 1027 aaPredicted RBP13.63□□□□□ -0.23
NDFIP2-204ENST00000494647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.4□□□□□ -0.26
NDFIP2-204ENST00000494647 HNRNPUL2Q1KMD3 747 aaKnown RBP13.4□□□□□ -0.26
NDFIP2-204ENST00000494647 FOXD4L1Q9NU39 408 aa13.37□□□□□ -0.27
NDFIP2-204ENST00000494647 MYCNP04198 464 aaPredicted RBP13.35□□□□□ -0.27
NDFIP2-204ENST00000494647 CAPN15O75808 1086 aa13.34□□□□□ -0.27
NDFIP2-204ENST00000494647 APLP2Q06481 763 aa13.34□□□□□ -0.27
NDFIP2-204ENST00000494647 SPINK5Q9NQ38 1064 aaPredicted RBP13.34□□□□□ -0.27
NDFIP2-204ENST00000494647 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
NDFIP2-204ENST00000494647 ZBTB22O15209 634 aa13.23□□□□□ -0.29
NDFIP2-204ENST00000494647 ZNF219Q9P2Y4 722 aaPredicted RBP13.2□□□□□ -0.3
NDFIP2-204ENST00000494647 TRHP20396 242 aaPredicted RBP13.19□□□□□ -0.3
NDFIP2-204ENST00000494647 DSG3P32926 999 aa13.15□□□□□ -0.3
NDFIP2-204ENST00000494647 ABCB7O75027 752 aa13.05□□□□□ -0.32
NDFIP2-204ENST00000494647 ATF5Q9Y2D1 282 aaPredicted RBP12.97□□□□□ -0.33
NDFIP2-204ENST00000494647 EHMT2Q96KQ7 1210 aa12.95□□□□□ -0.34
NDFIP2-204ENST00000494647 ATXN8OSP0DMR3 200 aa12.92□□□□□ -0.34
NDFIP2-204ENST00000494647 POLA2Q14181 598 aa12.89□□□□□ -0.35
NDFIP2-204ENST00000494647 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
NDFIP2-204ENST00000494647 ZBTB12Q9Y330 459 aaPredicted RBP12.69□□□□□ -0.38
NDFIP2-204ENST00000494647 RBM42Q9BTD8 480 aaKnown RBP12.59□□□□□ -0.39
NDFIP2-204ENST00000494647 FBLN2P98095 1184 aa12.51□□□□□ -0.41
NDFIP2-204ENST00000494647 OSCARQ8IYS5 282 aa12.48□□□□□ -0.41
NDFIP2-204ENST00000494647 MKRN4PQ13434 485 aaPredicted RBP12.39□□□□□ -0.43
NDFIP2-204ENST00000494647 AKT1S1Q96B36 256 aa12.34□□□□□ -0.43
NDFIP2-204ENST00000494647 SPDYE2BA6NHP3 402 aa12.3□□□□□ -0.44
NDFIP2-204ENST00000494647 SPDYE6P0CI01 402 aa12.3□□□□□ -0.44
NDFIP2-204ENST00000494647 SPDYE2Q495Y8 402 aa12.3□□□□□ -0.44
NDFIP2-204ENST00000494647 REM2Q8IYK8 340 aaPredicted RBP12.21□□□□□ -0.45
NDFIP2-204ENST00000494647 ZNF692Q9BU19 519 aaPredicted RBP12.21□□□□□ -0.45
NDFIP2-204ENST00000494647 CHRDL2Q6WN34 429 aa12.17□□□□□ -0.46
NDFIP2-204ENST00000494647 SSUH2Q9Y2M2 353 aa12.16□□□□□ -0.46
NDFIP2-204ENST00000494647 POTEHQ6S545 545 aa12.14□□□□□ -0.47
NDFIP2-204ENST00000494647 PITPNM1O00562 1244 aa12.09□□□□□ -0.47
NDFIP2-204ENST00000494647 PABPN1Q86U42 306 aaKnown RBP eCLIP12.03□□□□□ -0.48
NDFIP2-204ENST00000494647 SPDYE1Q8NFV5 336 aaPredicted RBP12.02□□□□□ -0.49
NDFIP2-204ENST00000494647 SPDYE4A6NLX3 237 aa12□□□□□ -0.49
NDFIP2-204ENST00000494647 CLEC11AQ9Y240 323 aa11.99□□□□□ -0.49
NDFIP2-204ENST00000494647 PIP4P2Q8N4L2 257 aa11.93□□□□□ -0.5
NDFIP2-204ENST00000494647 FXR2P51116 673 aaKnown RBP eCLIP11.9□□□□□ -0.5
NDFIP2-204ENST00000494647 PRR29P0C7W0 189 aa11.83□□□□□ -0.52
NDFIP2-204ENST00000494647 PRKAR2AP13861 404 aaKnown RBP11.78□□□□□ -0.52
NDFIP2-204ENST00000494647 STAG3Q9UJ98 1225 aa11.78□□□□□ -0.52
NDFIP2-204ENST00000494647 FKBP8Q14318 412 aa11.72□□□□□ -0.53
NDFIP2-204ENST00000494647 PROM2Q8N271 834 aa11.72□□□□□ -0.53
NDFIP2-204ENST00000494647 CHADLQ6NUI6 762 aa11.71□□□□□ -0.53
NDFIP2-204ENST00000494647 HAX1O00165 279 aa11.66□□□□□ -0.54
NDFIP2-204ENST00000494647 CREBZFQ9NS37 354 aa11.58□□□□□ -0.56
NDFIP2-204ENST00000494647 FARP1Q9Y4F1 1045 aaPredicted RBP11.57□□□□□ -0.56
NDFIP2-204ENST00000494647 SP7Q8TDD2 431 aaPredicted RBP11.52□□□□□ -0.57
NDFIP2-204ENST00000494647 C19orf67A6NJJ6 358 aa11.51□□□□□ -0.57
NDFIP2-204ENST00000494647 EVX2Q03828 476 aa11.48□□□□□ -0.57
NDFIP2-204ENST00000494647 CD44P16070 742 aaKnown RBP11.44□□□□□ -0.58
NDFIP2-204ENST00000494647 PLEKHG5O94827 1062 aa11.43□□□□□ -0.58
NDFIP2-204ENST00000494647 NPM1P06748 294 aaKnown RBP eCLIP11.42□□□□□ -0.58
NDFIP2-204ENST00000494647 MIER1Q8N108 512 aa11.42□□□□□ -0.58
NDFIP2-204ENST00000494647 MNX1P50219 401 aaPredicted RBP11.4□□□□□ -0.58
NDFIP2-204ENST00000494647 FBXO3Q9UK99 471 aa11.4□□□□□ -0.58
NDFIP2-204ENST00000494647 PLCD3Q8N3E9 789 aa11.39□□□□□ -0.59
NDFIP2-204ENST00000494647 PAK3O75914 559 aaPredicted RBP11.33□□□□□ -0.6
NDFIP2-204ENST00000494647 ZRANB1Q9UGI0 708 aa11.32□□□□□ -0.6
NDFIP2-204ENST00000494647 ZBTB47Q9UFB7 747 aaPredicted RBP11.29□□□□□ -0.6
NDFIP2-204ENST00000494647 GABBR2O75899 941 aa11.27□□□□□ -0.61
NDFIP2-204ENST00000494647 ZNF579Q8NAF0 562 aaKnown RBP11.27□□□□□ -0.61
NDFIP2-204ENST00000494647 VASPP50552 380 aaPredicted RBP11.25□□□□□ -0.61
NDFIP2-204ENST00000494647 CLCN6P51797 869 aa11.22□□□□□ -0.61
NDFIP2-204ENST00000494647 TSPYL2Q9H2G4 693 aaPredicted RBP11.21□□□□□ -0.61
NDFIP2-204ENST00000494647 PHF12Q96QT6 1004 aa11.18□□□□□ -0.62
NDFIP2-204ENST00000494647 RASEFQ8IZ41 740 aa11.17□□□□□ -0.62
NDFIP2-204ENST00000494647 KLHL34Q8N239 644 aa11.14□□□□□ -0.63
NDFIP2-204ENST00000494647 NUBP1P53384 320 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 335.4 ms