RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 TRAK2O60296 914 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 MMP10P09238 476 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 KCNJ4P48050 445 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 CCDC158Q5M9N0 1113 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 TMC4Q7Z404 712 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 RPGRQ92834 1020 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 NEUROD6Q96NK8 337 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 CRAMP1Q96RY5 1269 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 HAUS7Q99871 368 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 ANKRD2Q9GZV1 360 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 LTBP1Q14766 1721 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 CACNA1SQ13698 1873 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 PDE6BP35913 854 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 TIMM10P62072 90 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 CHRNDQ07001 517 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 UBE4AQ14139 1066 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 CELF1Q92879 486 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 XAGE2Q96GT9 111 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 PLSCR2Q9NRY7 297 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 EPB41L2O43491 1005 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-211ENST00000493660 IFIT1P09914 478 aaKnown RBP8.62□□□□□ -1.03
SMARCE1-211ENST00000493660 UQCRFS1P1P0C7P4 283 aa8.62□□□□□ -1.03
SMARCE1-211ENST00000493660 MCM5P33992 734 aa8.62□□□□□ -1.03
SMARCE1-211ENST00000493660 CBX1P83916 185 aa8.62□□□□□ -1.03
SMARCE1-211ENST00000493660 RILPL2Q969X0 211 aa8.62□□□□□ -1.03
SMARCE1-211ENST00000493660 DDX11L8A8MPP1 907 aa8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 TULP2O00295 520 aa8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 CLSTN1O94985 981 aa8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 CHMLP26374 656 aa8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 TTC39AQ5SRH9 613 aa8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 GORABQ5T7V8 394 aa8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 ZNF771Q7L3S4 317 aaPredicted RBP8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 TIGD1Q96MW7 591 aa8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 PLCD4Q9BRC7 762 aa8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 MINPP1Q9UNW1 487 aa8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 KIF3AQ9Y496 699 aa8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 BBOX1O75936 387 aa8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 NPR1P16066 1061 aa8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 ARID4AP29374 1257 aaPredicted RBP8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 GABPB1Q06547 395 aaPredicted RBP8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 CCDC24Q8N4L8 307 aa8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 BOLA2Q9H3K6 86 aa8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 DUOX1Q9NRD9 1551 aa8.61□□□□□ -1.03
SMARCE1-211ENST00000493660 C10orf71Q711Q0 1435 aa8.6□□□□□ -1.03
SMARCE1-211ENST00000493660 REC8O95072 547 aa8.6□□□□□ -1.03
SMARCE1-211ENST00000493660 SEC24BO95487 1268 aa8.6□□□□□ -1.03
SMARCE1-211ENST00000493660 HMGB1P09429 215 aaKnown RBP8.6□□□□□ -1.03
SMARCE1-211ENST00000493660 ADORA1P30542 326 aa8.6□□□□□ -1.03
SMARCE1-211ENST00000493660 CERS3Q8IU89 383 aa8.6□□□□□ -1.03
SMARCE1-211ENST00000493660 RUFY2Q8WXA3 655 aa8.6□□□□□ -1.03
SMARCE1-211ENST00000493660 UPF1Q92900 1129 aaKnown RBP eCLIP8.6□□□□□ -1.03
SMARCE1-211ENST00000493660 ESYT1Q9BSJ8 1104 aa8.6□□□□□ -1.03
SMARCE1-211ENST00000493660 RAD50Q92878 1312 aa8.6□□□□□ -1.03
SMARCE1-211ENST00000493660 KIAA1551Q9HCM1 1747 aa8.6□□□□□ -1.03
SMARCE1-211ENST00000493660 MAST2Q6P0Q8 1798 aa8.6□□□□□ -1.03
SMARCE1-211ENST00000493660 LRRFIP1Q32MZ4 808 aaKnown RBP8.6□□□□□ -1.03
SMARCE1-211ENST00000493660 MSL1Q68DK7 614 aa8.6□□□□□ -1.03
SMARCE1-211ENST00000493660 TBC1D32Q96NH3 1257 aa8.6□□□□□ -1.03
SMARCE1-211ENST00000493660 NOL7Q9UMY1 257 aaKnown RBP8.6□□□□□ -1.03
SMARCE1-211ENST00000493660 LEMD3Q9Y2U8 911 aa8.6□□□□□ -1.03
SMARCE1-211ENST00000493660 MYO5AQ9Y4I1 1855 aaKnown RBP8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 MAP4K4O95819 1239 aaPredicted RBP8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 SRGNP10124 158 aa8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 ALDH1B1P30837 517 aa8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 MFAP1P55081 439 aaKnown RBP8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 CCDC102BQ68D86 513 aa8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 STYK1Q6J9G0 422 aa8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 C15orf52Q6ZUT6 534 aaKnown RBP8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 KBTBD3Q8NAB2 608 aa8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 MYRIPQ8NFW9 859 aa8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 HELBQ8NG08 1087 aaPredicted RBP8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 MASTLQ96GX5 879 aa8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 GZF1Q9H116 711 aaPredicted RBP8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 PAG1Q9NWQ8 432 aa8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 ZNF804BA4D1E1 1349 aa8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 XDHP47989 1333 aa8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 CCDC88AQ3V6T2 1871 aa8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 TAF5LO75529 589 aa8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 RBM25P49756 843 aaKnown RBP8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 TTF1Q15361 905 aaPredicted RBP8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 NBPF20Q3BBV1 942 aa8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 TMED8Q6PL24 325 aaPredicted RBP8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 FSD1Q9BTV5 496 aa8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 SNRKQ9NRH2 765 aa8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 DIAPH3Q9NSV4 1193 aa8.59□□□□□ -1.03
SMARCE1-211ENST00000493660 PDS5AQ29RF7 1337 aaKnown RBP8.59□□□□□ -1.04
SMARCE1-211ENST00000493660 SEMA3EO15041 775 aa8.58□□□□□ -1.04
SMARCE1-211ENST00000493660 ATP2B4P23634 1241 aa8.58□□□□□ -1.04
SMARCE1-211ENST00000493660 SP8Q8IXZ3 490 aa8.58□□□□□ -1.04
SMARCE1-211ENST00000493660 C22orf23Q9BZE7 217 aa8.58□□□□□ -1.04
SMARCE1-211ENST00000493660 GNL3LQ9NVN8 582 aaKnown RBP8.58□□□□□ -1.04
SMARCE1-211ENST00000493660 CALCOCO1Q9P1Z2 691 aa8.58□□□□□ -1.04
SMARCE1-211ENST00000493660 PPEF1O14829 653 aaPredicted RBP8.57□□□□□ -1.04
SMARCE1-211ENST00000493660 SGSM2O43147 1006 aa8.57□□□□□ -1.04
SMARCE1-211ENST00000493660 IGSF3O75054 1194 aa8.57□□□□□ -1.04
SMARCE1-211ENST00000493660 ZFYP08048 801 aaPredicted RBP8.57□□□□□ -1.04
SMARCE1-211ENST00000493660 GTF2F1P35269 517 aaKnown RBP eCLIP8.57□□□□□ -1.04
SMARCE1-211ENST00000493660 PHKA1P46020 1223 aa8.57□□□□□ -1.04
SMARCE1-211ENST00000493660 CAVIN4Q5BKX8 364 aa8.57□□□□□ -1.04
SMARCE1-211ENST00000493660 BRCA1P38398 1863 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms