RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 VEZTQ9HBM0 779 aa18.48■□□□□ 0.55
BRAT1-206ENST00000493232 NSFL1CQ9UNZ2 370 aaKnown RBP18.48■□□□□ 0.55
BRAT1-206ENST00000493232 ATP10BO94823 1461 aa18.48■□□□□ 0.55
BRAT1-206ENST00000493232 DNM1Q05193 864 aaKnown RBP18.48■□□□□ 0.55
BRAT1-206ENST00000493232 ATL3Q6DD88 541 aa18.48■□□□□ 0.55
BRAT1-206ENST00000493232 TTC6Q86TZ1 520 aa18.48■□□□□ 0.55
BRAT1-206ENST00000493232 DYNC1I1O14576 645 aa18.48■□□□□ 0.55
BRAT1-206ENST00000493232 TFCP2Q12800 502 aa18.48■□□□□ 0.55
BRAT1-206ENST00000493232 FMNL3Q8IVF7 1028 aa18.48■□□□□ 0.55
BRAT1-206ENST00000493232 MSANTD4Q8NCY6 345 aa18.47■□□□□ 0.55
BRAT1-206ENST00000493232 SH2D4AQ9H788 454 aa18.47■□□□□ 0.55
BRAT1-206ENST00000493232 SYCP2Q9BX26 1530 aa18.47■□□□□ 0.55
BRAT1-206ENST00000493232 HELLSQ9NRZ9 838 aa18.47■□□□□ 0.55
BRAT1-206ENST00000493232 DENND2AQ9ULE3 1009 aa18.47■□□□□ 0.55
BRAT1-206ENST00000493232 PIK3C2GO75747 1445 aa18.47■□□□□ 0.55
BRAT1-206ENST00000493232 A0A1W2PRG0 241 aa18.47■□□□□ 0.55
BRAT1-206ENST00000493232 KRT86O43790 486 aa18.47■□□□□ 0.55
BRAT1-206ENST00000493232 CEP63Q96MT8 703 aa18.47■□□□□ 0.55
BRAT1-206ENST00000493232 ZSWIM4Q9H7M6 989 aa18.47■□□□□ 0.55
BRAT1-206ENST00000493232 ATP2A1O14983 1001 aa18.47■□□□□ 0.55
BRAT1-206ENST00000493232 INTS4Q96HW7 963 aaKnown RBP18.47■□□□□ 0.55
BRAT1-206ENST00000493232 IQCGQ9H095 443 aaKnown RBP18.47■□□□□ 0.55
BRAT1-206ENST00000493232 STMN4Q9H169 189 aaPredicted RBP18.47■□□□□ 0.55
BRAT1-206ENST00000493232 RNMTO43148 476 aaKnown RBP18.46■□□□□ 0.55
BRAT1-206ENST00000493232 TUBB4BP68371 445 aa18.46■□□□□ 0.55
BRAT1-206ENST00000493232 CDCA7Q9BWT1 371 aaPredicted RBP18.46■□□□□ 0.55
BRAT1-206ENST00000493232 DNAJC25Q9H1X3 360 aa18.46■□□□□ 0.55
BRAT1-206ENST00000493232 BABAM1Q9NWV8 329 aa18.46■□□□□ 0.55
BRAT1-206ENST00000493232 GCP02774 474 aa18.46■□□□□ 0.55
BRAT1-206ENST00000493232 KIF5AQ12840 1032 aa18.46■□□□□ 0.55
BRAT1-206ENST00000493232 CWF19L2Q2TBE0 894 aaKnown RBP18.46■□□□□ 0.55
BRAT1-206ENST00000493232 PTPDC1A2A3K4 754 aa18.46■□□□□ 0.55
BRAT1-206ENST00000493232 NSRP1Q9H0G5 558 aaKnown RBP18.46■□□□□ 0.55
BRAT1-206ENST00000493232 TFCP2L1Q9NZI6 479 aa18.46■□□□□ 0.55
BRAT1-206ENST00000493232 SYT1P21579 422 aa18.46■□□□□ 0.55
BRAT1-206ENST00000493232 DTHD1Q6ZMT9 781 aa18.46■□□□□ 0.55
BRAT1-206ENST00000493232 CCDC186Q7Z3E2 898 aa18.46■□□□□ 0.55
BRAT1-206ENST00000493232 IP6K1Q92551 441 aa18.46■□□□□ 0.55
BRAT1-206ENST00000493232 MIGA1Q8NAN2 632 aa18.45■□□□□ 0.54
BRAT1-206ENST00000493232 DDX21Q9NR30 783 aaKnown RBP eCLIP18.45■□□□□ 0.54
BRAT1-206ENST00000493232 SBNO2Q9Y2G9 1366 aa18.45■□□□□ 0.54
BRAT1-206ENST00000493232 AK2P54819 239 aa18.45■□□□□ 0.54
BRAT1-206ENST00000493232 RUFY3Q7L099 469 aa18.45■□□□□ 0.54
BRAT1-206ENST00000493232 NEK11Q8NG66 645 aa18.45■□□□□ 0.54
BRAT1-206ENST00000493232 RBM17Q96I25 401 aaKnown RBP18.45■□□□□ 0.54
BRAT1-206ENST00000493232 EYA1Q99502 592 aa18.45■□□□□ 0.54
BRAT1-206ENST00000493232 PPP1R2P41236 205 aa18.45■□□□□ 0.54
BRAT1-206ENST00000493232 IQUBQ8NA54 791 aa18.45■□□□□ 0.54
BRAT1-206ENST00000493232 DNAI1Q9UI46 699 aa18.45■□□□□ 0.54
BRAT1-206ENST00000493232 ABCC10Q5T3U5 1492 aa18.45■□□□□ 0.54
BRAT1-206ENST00000493232 APOBRQ0VD83 1088 aa18.45■□□□□ 0.54
BRAT1-206ENST00000493232 PARP10Q53GL7 1025 aa18.45■□□□□ 0.54
BRAT1-206ENST00000493232 C16orf71Q8IYS4 520 aaPredicted RBP18.45■□□□□ 0.54
BRAT1-206ENST00000493232 CCDC42Q96M95 316 aa18.45■□□□□ 0.54
BRAT1-206ENST00000493232 CTAGE9A4FU28 777 aa18.44■□□□□ 0.54
BRAT1-206ENST00000493232 ARFGAP3Q9NP61 516 aa18.44■□□□□ 0.54
BRAT1-206ENST00000493232 HOXC9P31274 260 aa18.44■□□□□ 0.54
BRAT1-206ENST00000493232 NBPF14Q5TI25 921 aa18.44■□□□□ 0.54
BRAT1-206ENST00000493232 CLEC11AQ9Y240 323 aa18.44■□□□□ 0.54
BRAT1-206ENST00000493232 PARP1P09874 1014 aaKnown RBP18.44■□□□□ 0.54
BRAT1-206ENST00000493232 TYRO3Q06418 890 aa18.44■□□□□ 0.54
BRAT1-206ENST00000493232 VTI1AQ96AJ9 217 aa18.44■□□□□ 0.54
BRAT1-206ENST00000493232 ZRANB1Q9UGI0 708 aa18.44■□□□□ 0.54
BRAT1-206ENST00000493232 PLS1Q14651 629 aa18.43■□□□□ 0.54
BRAT1-206ENST00000493232 OPA1O60313 960 aa18.43■□□□□ 0.54
BRAT1-206ENST00000493232 RPL13P26373 211 aaKnown RBP18.43■□□□□ 0.54
BRAT1-206ENST00000493232 GTF2F1P35269 517 aaKnown RBP eCLIP18.43■□□□□ 0.54
BRAT1-206ENST00000493232 HELBQ8NG08 1087 aaPredicted RBP18.43■□□□□ 0.54
BRAT1-206ENST00000493232 CEP83Q9Y592 693 aa18.43■□□□□ 0.54
BRAT1-206ENST00000493232 CABLES1Q8TDN4 633 aa18.43■□□□□ 0.54
BRAT1-206ENST00000493232 ZBTB40Q9NUA8 1239 aa18.43■□□□□ 0.54
BRAT1-206ENST00000493232 CHMLP26374 656 aa18.42■□□□□ 0.54
BRAT1-206ENST00000493232 MCM7P33993 719 aa18.42■□□□□ 0.54
BRAT1-206ENST00000493232 NOLC1Q14978 699 aaKnown RBP eCLIP18.42■□□□□ 0.54
BRAT1-206ENST00000493232 HSP90AA4PQ58FG1 418 aa18.42■□□□□ 0.54
BRAT1-206ENST00000493232 APBB1IPQ7Z5R6 666 aaPredicted RBP18.42■□□□□ 0.54
BRAT1-206ENST00000493232 BICC1Q9H694 974 aaKnown RBP18.42■□□□□ 0.54
BRAT1-206ENST00000493232 RGS22Q8NE09 1264 aa18.42■□□□□ 0.54
BRAT1-206ENST00000493232 YTHDC2Q9H6S0 1430 aaKnown RBP18.42■□□□□ 0.54
BRAT1-206ENST00000493232 PTGS1P23219 599 aa18.42■□□□□ 0.54
BRAT1-206ENST00000493232 SMC5Q8IY18 1101 aa18.42■□□□□ 0.54
BRAT1-206ENST00000493232 HOXB7P09629 217 aa18.42■□□□□ 0.54
BRAT1-206ENST00000493232 ZNF354CQ86Y25 554 aa18.42■□□□□ 0.54
BRAT1-206ENST00000493232 EEF2P13639 858 aaKnown RBP18.41■□□□□ 0.54
BRAT1-206ENST00000493232 LMOD1P29536 600 aaPredicted RBP18.41■□□□□ 0.54
BRAT1-206ENST00000493232 UBXN1Q04323 297 aa18.41■□□□□ 0.54
BRAT1-206ENST00000493232 CERS3Q8IU89 383 aa18.41■□□□□ 0.54
BRAT1-206ENST00000493232 TSPYL6Q8N831 410 aa18.41■□□□□ 0.54
BRAT1-206ENST00000493232 PLBD2Q8NHP8 589 aa18.41■□□□□ 0.54
BRAT1-206ENST00000493232 TRAPPC3LQ5T215 181 aa18.41■□□□□ 0.54
BRAT1-206ENST00000493232 PLEKHM2Q8IWE5 1019 aa18.41■□□□□ 0.54
BRAT1-206ENST00000493232 MBD4O95243 580 aa18.4■□□□□ 0.54
BRAT1-206ENST00000493232 MAP3K9P80192 1104 aa18.4■□□□□ 0.54
BRAT1-206ENST00000493232 CCDC65Q8IXS2 484 aa18.4■□□□□ 0.54
BRAT1-206ENST00000493232 EYA2O00167 538 aa18.4■□□□□ 0.54
BRAT1-206ENST00000493232 TMEM87BQ96K49 555 aa18.4■□□□□ 0.54
BRAT1-206ENST00000493232 TTC14Q96N46 770 aa18.4■□□□□ 0.54
BRAT1-206ENST00000493232 GSTA5Q7RTV2 222 aa18.4■□□□□ 0.54
BRAT1-206ENST00000493232 A0A1W2PP64 1363 aa18.4■□□□□ 0.54
BRAT1-206ENST00000493232 KRT222Q8N1A0 295 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms