RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 DHX15O43143 795 aaKnown RBP6.3□□□□□ -1.4
CPSF3-205ENST00000489629 POLR3DP05423 398 aaPredicted RBP6.3□□□□□ -1.4
CPSF3-205ENST00000489629 IKBKEQ14164 716 aa6.3□□□□□ -1.4
CPSF3-205ENST00000489629 MYRFLQ96LU7 910 aa6.3□□□□□ -1.4
CPSF3-205ENST00000489629 TUT1Q9H6E5 874 aaKnown RBP6.3□□□□□ -1.4
CPSF3-205ENST00000489629 SOX17Q9H6I2 414 aaPredicted RBP6.3□□□□□ -1.4
CPSF3-205ENST00000489629 STOML1Q9UBI4 398 aa6.3□□□□□ -1.4
CPSF3-205ENST00000489629 A0A1W2PP55 124 aa6.29□□□□□ -1.4
CPSF3-205ENST00000489629 METTL12A8MUP2 240 aa6.29□□□□□ -1.4
CPSF3-205ENST00000489629 SUPT5HO00267 1087 aaKnown RBP6.29□□□□□ -1.4
CPSF3-205ENST00000489629 IGLV1-40P01703 118 aa6.29□□□□□ -1.4
CPSF3-205ENST00000489629 ESRRAP11474 423 aaPredicted RBP6.29□□□□□ -1.4
CPSF3-205ENST00000489629 ARL4DP49703 201 aa6.29□□□□□ -1.4
CPSF3-205ENST00000489629 ANKRD34AQ69YU3 496 aa6.29□□□□□ -1.4
CPSF3-205ENST00000489629 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.29□□□□□ -1.4
CPSF3-205ENST00000489629 GLYCTKQ8IVS8 523 aa6.29□□□□□ -1.4
CPSF3-205ENST00000489629 RETREG2Q8NC44 543 aa6.29□□□□□ -1.4
CPSF3-205ENST00000489629 UTP4Q969X6 686 aaKnown RBP6.29□□□□□ -1.4
CPSF3-205ENST00000489629 FAM129BQ96TA1 746 aa6.29□□□□□ -1.4
CPSF3-205ENST00000489629 ARID3AQ99856 593 aa6.29□□□□□ -1.4
CPSF3-205ENST00000489629 RUSC1Q9BVN2 902 aa6.29□□□□□ -1.4
CPSF3-205ENST00000489629 RNF208Q9H0X6 261 aa6.29□□□□□ -1.4
CPSF3-205ENST00000489629 BRPF3Q9ULD4 1205 aa6.29□□□□□ -1.4
CPSF3-205ENST00000489629 IGHA2P01877 340 aa6.28□□□□□ -1.4
CPSF3-205ENST00000489629 PREPP48147 710 aa6.28□□□□□ -1.4
CPSF3-205ENST00000489629 ERICH6Q7L0X2 663 aa6.28□□□□□ -1.4
CPSF3-205ENST00000489629 CCNJLQ8IV13 435 aa6.28□□□□□ -1.4
CPSF3-205ENST00000489629 FAM20CQ8IXL6 584 aa6.28□□□□□ -1.4
CPSF3-205ENST00000489629 ASAP3Q8TDY4 903 aa6.28□□□□□ -1.4
CPSF3-205ENST00000489629 TCF12Q99081 682 aa6.28□□□□□ -1.4
CPSF3-205ENST00000489629 C7orf69Q9H7B7 122 aa6.28□□□□□ -1.4
CPSF3-205ENST00000489629 GSC2O15499 205 aa6.27□□□□□ -1.41
CPSF3-205ENST00000489629 DLGAP3O95886 979 aa6.27□□□□□ -1.41
CPSF3-205ENST00000489629 USPL1Q5W0Q7 1092 aa6.27□□□□□ -1.41
CPSF3-205ENST00000489629 TRIM42Q8IWZ5 723 aa6.27□□□□□ -1.41
CPSF3-205ENST00000489629 TMPRSS13Q9BYE2 586 aa6.27□□□□□ -1.41
CPSF3-205ENST00000489629 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
CPSF3-205ENST00000489629 NRSN2Q9GZP1 204 aa6.27□□□□□ -1.41
CPSF3-205ENST00000489629 A0A096LPE4 126 aa6.26□□□□□ -1.41
CPSF3-205ENST00000489629 LOC100289279A0A1B0GTE1 492 aa6.26□□□□□ -1.41
CPSF3-205ENST00000489629 A0A1W2PPZ6 126 aa6.26□□□□□ -1.41
CPSF3-205ENST00000489629 GRIA4P48058 902 aa6.26□□□□□ -1.41
CPSF3-205ENST00000489629 KIAA0319Q5VV43 1072 aa6.26□□□□□ -1.41
CPSF3-205ENST00000489629 RNF43Q68DV7 783 aa6.26□□□□□ -1.41
CPSF3-205ENST00000489629 NBPF11Q86T75 865 aa6.26□□□□□ -1.41
CPSF3-205ENST00000489629 ZDHHC13Q8IUH4 622 aa6.26□□□□□ -1.41
CPSF3-205ENST00000489629 CLEC10AQ8IUN9 316 aa6.26□□□□□ -1.41
CPSF3-205ENST00000489629 FAM83CQ9BQN1 747 aa6.26□□□□□ -1.41
CPSF3-205ENST00000489629 HMX2A2RU54 273 aa6.25□□□□□ -1.41
CPSF3-205ENST00000489629 SART1O43290 800 aaKnown RBP6.25□□□□□ -1.41
CPSF3-205ENST00000489629 NDUFB5O43674 189 aa6.25□□□□□ -1.41
CPSF3-205ENST00000489629 MED26O95402 600 aa6.25□□□□□ -1.41
CPSF3-205ENST00000489629 TIAF1O95411 115 aa6.25□□□□□ -1.41
CPSF3-205ENST00000489629 BMP3P12645 472 aa6.25□□□□□ -1.41
CPSF3-205ENST00000489629 CD97P48960 835 aa6.25□□□□□ -1.41
CPSF3-205ENST00000489629 NFIAQ12857 509 aa6.25□□□□□ -1.41
CPSF3-205ENST00000489629 ORC1Q13415 861 aa6.25□□□□□ -1.41
CPSF3-205ENST00000489629 ZNF423Q2M1K9 1284 aa6.25□□□□□ -1.41
CPSF3-205ENST00000489629 SPRED3Q2MJR0 410 aa6.25□□□□□ -1.41
CPSF3-205ENST00000489629 SMG8Q8ND04 991 aaKnown RBP6.25□□□□□ -1.41
CPSF3-205ENST00000489629 CITED4Q96RK1 184 aa6.25□□□□□ -1.41
CPSF3-205ENST00000489629 SUGCTQ9HAC7 445 aa6.25□□□□□ -1.41
CPSF3-205ENST00000489629 LIN7BQ9HAP6 207 aa6.25□□□□□ -1.41
CPSF3-205ENST00000489629 HIF3AQ9Y2N7 669 aa6.25□□□□□ -1.41
CPSF3-205ENST00000489629 GPR182O15218 404 aa6.24□□□□□ -1.41
CPSF3-205ENST00000489629 NEFLP07196 543 aa6.24□□□□□ -1.41
CPSF3-205ENST00000489629 PCDH1Q08174 1060 aa6.24□□□□□ -1.41
CPSF3-205ENST00000489629 PDE3BQ13370 1112 aa6.24□□□□□ -1.41
CPSF3-205ENST00000489629 FDX2Q6P4F2 183 aa6.24□□□□□ -1.41
CPSF3-205ENST00000489629 DBNDD2Q9BQY9 259 aa6.24□□□□□ -1.41
CPSF3-205ENST00000489629 USP26Q9BXU7 913 aa6.24□□□□□ -1.41
CPSF3-205ENST00000489629 CLEC4MQ9H2X3 399 aaPredicted RBP6.24□□□□□ -1.41
CPSF3-205ENST00000489629 PRR19A6NJB7 356 aa6.23□□□□□ -1.41
CPSF3-205ENST00000489629 CPNE3O75131 537 aaKnown RBP6.23□□□□□ -1.41
CPSF3-205ENST00000489629 TGFB1P01137 390 aa6.23□□□□□ -1.41
CPSF3-205ENST00000489629 SSTR4P31391 388 aa6.23□□□□□ -1.41
CPSF3-205ENST00000489629 GSTM4Q03013 218 aa6.23□□□□□ -1.41
CPSF3-205ENST00000489629 PDE4CQ08493 712 aa6.23□□□□□ -1.41
CPSF3-205ENST00000489629 EXOSC6Q5RKV6 272 aaKnown RBP6.23□□□□□ -1.41
CPSF3-205ENST00000489629 BEND4Q6ZU67 534 aa6.23□□□□□ -1.41
CPSF3-205ENST00000489629 KIAA1324LA8MWY0 1029 aaPredicted RBP6.22□□□□□ -1.41
CPSF3-205ENST00000489629 CTSBP07858 339 aa6.22□□□□□ -1.41
CPSF3-205ENST00000489629 ITPKAP23677 461 aa6.22□□□□□ -1.41
CPSF3-205ENST00000489629 SGO2Q562F6 1265 aa6.22□□□□□ -1.41
CPSF3-205ENST00000489629 NUTM2GQ5VZR2 741 aa6.22□□□□□ -1.41
CPSF3-205ENST00000489629 CCER1Q8TC90 406 aaPredicted RBP6.22□□□□□ -1.41
CPSF3-205ENST00000489629 PSMG3-AS1Q96PY0 264 aa6.22□□□□□ -1.41
CPSF3-205ENST00000489629 RBCK1Q9BYM8 510 aa6.22□□□□□ -1.41
CPSF3-205ENST00000489629 NIF3L1Q9GZT8 377 aa6.22□□□□□ -1.41
CPSF3-205ENST00000489629 DNAJC25Q9H1X3 360 aa6.22□□□□□ -1.41
CPSF3-205ENST00000489629 KCNF1Q9H3M0 494 aa6.22□□□□□ -1.41
CPSF3-205ENST00000489629 CYP4F12Q9HCS2 524 aa6.22□□□□□ -1.41
CPSF3-205ENST00000489629 NPHS2Q9NP85 383 aa6.22□□□□□ -1.41
CPSF3-205ENST00000489629 EIF1AYO14602 144 aaKnown RBP6.21□□□□□ -1.42
CPSF3-205ENST00000489629 EIF4EBP3O60516 100 aaPredicted RBP6.21□□□□□ -1.42
CPSF3-205ENST00000489629 COBLO75128 1261 aa6.21□□□□□ -1.42
CPSF3-205ENST00000489629 B3GALT4O96024 378 aa6.21□□□□□ -1.42
CPSF3-205ENST00000489629 MAP4P27816 1152 aaKnown RBP6.21□□□□□ -1.42
CPSF3-205ENST00000489629 C12orf50Q8NA57 414 aaPredicted RBP6.21□□□□□ -1.42
CPSF3-205ENST00000489629 CCDC74AQ96AQ1 378 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms