RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 DEFB123Q8N688 67 aa12.63□□□□□ -0.39
CDK11A-217ENST00000487462 TBC1D16Q8TBP0 767 aa12.63□□□□□ -0.39
CDK11A-217ENST00000487462 EYA3Q99504 573 aa12.63□□□□□ -0.39
CDK11A-217ENST00000487462 PRDM6Q9NQX0 595 aa12.63□□□□□ -0.39
CDK11A-217ENST00000487462 FZD1Q9UP38 647 aa12.63□□□□□ -0.39
CDK11A-217ENST00000487462 ERBB4Q15303 1308 aa12.62□□□□□ -0.39
CDK11A-217ENST00000487462 U2SURPO15042 1029 aaKnown RBP12.62□□□□□ -0.39
CDK11A-217ENST00000487462 ZBTB48P10074 688 aaPredicted RBP12.62□□□□□ -0.39
CDK11A-217ENST00000487462 SH3TC2Q8TF17 1288 aa12.62□□□□□ -0.39
CDK11A-217ENST00000487462 CELF1Q92879 486 aaKnown RBP12.62□□□□□ -0.39
CDK11A-217ENST00000487462 WNK4Q96J92 1243 aa12.62□□□□□ -0.39
CDK11A-217ENST00000487462 MIS18AQ9NYP9 233 aa12.62□□□□□ -0.39
CDK11A-217ENST00000487462 KNSTRNQ9Y448 316 aa12.62□□□□□ -0.39
CDK11A-217ENST00000487462 TTC28Q96AY4 2481 aa12.62□□□□□ -0.39
CDK11A-217ENST00000487462 SSC5DA1L4H1 1573 aa12.61□□□□□ -0.39
CDK11A-217ENST00000487462 ALPK3Q96L96 1907 aa12.61□□□□□ -0.39
CDK11A-217ENST00000487462 DCTN1Q14203 1278 aa12.61□□□□□ -0.39
CDK11A-217ENST00000487462 MFSD10Q14728 455 aa12.61□□□□□ -0.39
CDK11A-217ENST00000487462 GPR153Q6NV75 609 aa12.61□□□□□ -0.39
CDK11A-217ENST00000487462 LRP10Q7Z4F1 713 aa12.61□□□□□ -0.39
CDK11A-217ENST00000487462 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.61□□□□□ -0.39
CDK11A-217ENST00000487462 CLMNQ96JQ2 1002 aa12.61□□□□□ -0.39
CDK11A-217ENST00000487462 PTPN18Q99952 460 aa12.61□□□□□ -0.39
CDK11A-217ENST00000487462 ANGEL1Q9UNK9 670 aaKnown RBP12.61□□□□□ -0.39
CDK11A-217ENST00000487462 OTOFQ9HC10 1997 aa12.61□□□□□ -0.39
CDK11A-217ENST00000487462 PRKAR2BP31323 418 aa12.6□□□□□ -0.39
CDK11A-217ENST00000487462 GJA5P36382 358 aa12.6□□□□□ -0.39
CDK11A-217ENST00000487462 DSG2Q14126 1118 aa12.6□□□□□ -0.39
CDK11A-217ENST00000487462 NLRP10Q86W26 655 aa12.6□□□□□ -0.39
CDK11A-217ENST00000487462 RSPH6AQ9H0K4 717 aa12.6□□□□□ -0.39
CDK11A-217ENST00000487462 MTMR10Q9NXD2 777 aa12.6□□□□□ -0.39
CDK11A-217ENST00000487462 WNT10BO00744 389 aa12.59□□□□□ -0.39
CDK11A-217ENST00000487462 ANKRD13DQ6ZTN6 518 aa12.59□□□□□ -0.39
CDK11A-217ENST00000487462 PLPP6Q8IY26 295 aa12.59□□□□□ -0.39
CDK11A-217ENST00000487462 SLC10A4Q96EP9 437 aa12.59□□□□□ -0.39
CDK11A-217ENST00000487462 ZC3H12CQ9C0D7 883 aaKnown RBP12.59□□□□□ -0.39
CDK11A-217ENST00000487462 NR2E3Q9Y5X4 410 aa12.59□□□□□ -0.39
CDK11A-217ENST00000487462 SH3TC1Q8TE82 1336 aa12.59□□□□□ -0.39
CDK11A-217ENST00000487462 MTFR1Q15390 333 aa12.58□□□□□ -0.4
CDK11A-217ENST00000487462 TAF7Q15545 349 aaPredicted RBP12.58□□□□□ -0.4
CDK11A-217ENST00000487462 MAP3K11Q16584 847 aa12.58□□□□□ -0.4
CDK11A-217ENST00000487462 RTF1Q92541 710 aaKnown RBP12.58□□□□□ -0.4
CDK11A-217ENST00000487462 HTATIP2Q9BUP3 242 aa12.58□□□□□ -0.4
CDK11A-217ENST00000487462 STAP2Q9UGK3 403 aa12.58□□□□□ -0.4
CDK11A-217ENST00000487462 CDH23Q9H251 3354 aa12.58□□□□□ -0.4
CDK11A-217ENST00000487462 DLG5Q8TDM6 1919 aa12.57□□□□□ -0.4
CDK11A-217ENST00000487462 TESPA1A2RU30 521 aaPredicted RBP12.57□□□□□ -0.4
CDK11A-217ENST00000487462 UFL1O94874 794 aa12.57□□□□□ -0.4
CDK11A-217ENST00000487462 SASH1O94885 1247 aa12.57□□□□□ -0.4
CDK11A-217ENST00000487462 OTUD7BQ6GQQ9 843 aa12.57□□□□□ -0.4
CDK11A-217ENST00000487462 THUMPD2Q9BTF0 503 aaKnown RBP12.57□□□□□ -0.4
CDK11A-217ENST00000487462 ARHGAP39Q9C0H5 1083 aa12.57□□□□□ -0.4
CDK11A-217ENST00000487462 PODXL2Q9NZ53 605 aa12.57□□□□□ -0.4
CDK11A-217ENST00000487462 TRMT112Q9UI30 125 aaKnown RBP12.57□□□□□ -0.4
CDK11A-217ENST00000487462 ECM29Q5VYK3 1845 aa12.56□□□□□ -0.4
CDK11A-217ENST00000487462 EIF4A1P60842 406 aaKnown RBP12.56□□□□□ -0.4
CDK11A-217ENST00000487462 ZNF710Q8N1W2 664 aa12.56□□□□□ -0.4
CDK11A-217ENST00000487462 ZNF428Q96B54 188 aa12.56□□□□□ -0.4
CDK11A-217ENST00000487462 COL1A1P02452 1464 aaPredicted RBP12.56□□□□□ -0.4
CDK11A-217ENST00000487462 USP17L3A6NCW0 530 aa12.55□□□□□ -0.4
CDK11A-217ENST00000487462 USP17L4A6NCW7 530 aa12.55□□□□□ -0.4
CDK11A-217ENST00000487462 GJA8P48165 433 aa12.55□□□□□ -0.4
CDK11A-217ENST00000487462 ARHGEF6Q15052 776 aa12.55□□□□□ -0.4
CDK11A-217ENST00000487462 PDIA6Q15084 440 aa12.55□□□□□ -0.4
CDK11A-217ENST00000487462 SF3B3Q15393 1217 aaKnown RBP12.55□□□□□ -0.4
CDK11A-217ENST00000487462 PROSER3Q2NL68 480 aa12.55□□□□□ -0.4
CDK11A-217ENST00000487462 USP17L1Q7RTZ2 530 aa12.55□□□□□ -0.4
CDK11A-217ENST00000487462 APOBEC3FQ8IUX4 373 aaKnown RBP12.55□□□□□ -0.4
CDK11A-217ENST00000487462 MXD3Q9BW11 206 aa12.55□□□□□ -0.4
CDK11A-217ENST00000487462 HTATSF1O43719 755 aaKnown RBP12.53□□□□□ -0.4
CDK11A-217ENST00000487462 COL9A1P20849 921 aa12.53□□□□□ -0.4
CDK11A-217ENST00000487462 DACT2Q5SW24 774 aa12.53□□□□□ -0.4
CDK11A-217ENST00000487462 NKX2-3Q8TAU0 364 aa12.53□□□□□ -0.4
CDK11A-217ENST00000487462 ZBED3Q96IU2 234 aaPredicted RBP12.53□□□□□ -0.4
CDK11A-217ENST00000487462 GGA1Q9UJY5 639 aa12.53□□□□□ -0.4
CDK11A-217ENST00000487462 UNCXA6NJT0 531 aa12.52□□□□□ -0.41
CDK11A-217ENST00000487462 FARP2O94887 1054 aaPredicted RBP12.52□□□□□ -0.41
CDK11A-217ENST00000487462 ANXA1P04083 346 aa12.52□□□□□ -0.41
CDK11A-217ENST00000487462 GJB1P08034 283 aa12.52□□□□□ -0.41
CDK11A-217ENST00000487462 BMP8BP34820 402 aa12.52□□□□□ -0.41
CDK11A-217ENST00000487462 RPS8P62241 208 aaKnown RBP12.52□□□□□ -0.41
CDK11A-217ENST00000487462 TAF1CQ15572 869 aaPredicted RBP12.52□□□□□ -0.41
CDK11A-217ENST00000487462 LRIT3Q3SXY7 679 aa12.52□□□□□ -0.41
CDK11A-217ENST00000487462 HSP90AB3PQ58FF7 597 aa12.52□□□□□ -0.41
CDK11A-217ENST00000487462 GDF15Q99988 308 aa12.52□□□□□ -0.41
CDK11A-217ENST00000487462 DEFB129Q9H1M3 183 aa12.52□□□□□ -0.41
CDK11A-217ENST00000487462 ANKIB1Q9P2G1 1089 aa12.52□□□□□ -0.41
CDK11A-217ENST00000487462 TBC1D12O60347 775 aa12.51□□□□□ -0.41
CDK11A-217ENST00000487462 EVI5O60447 810 aa12.51□□□□□ -0.41
CDK11A-217ENST00000487462 LACTBP83111 547 aaPredicted RBP12.51□□□□□ -0.41
CDK11A-217ENST00000487462 E2F4Q16254 413 aa12.51□□□□□ -0.41
CDK11A-217ENST00000487462 PODNQ7Z5L7 613 aa12.51□□□□□ -0.41
CDK11A-217ENST00000487462 OGFOD1Q8N543 542 aa12.51□□□□□ -0.41
CDK11A-217ENST00000487462 BRI3BPQ8WY22 251 aa12.51□□□□□ -0.41
CDK11A-217ENST00000487462 ZFYVE28Q9HCC9 887 aa12.51□□□□□ -0.41
CDK11A-217ENST00000487462 ZSWIM6Q9HCJ5 1215 aa12.51□□□□□ -0.41
CDK11A-217ENST00000487462 RAPGEFL1Q9UHV5 662 aa12.51□□□□□ -0.41
CDK11A-217ENST00000487462 PPP1R12BO60237 982 aaPredicted RBP12.5□□□□□ -0.41
CDK11A-217ENST00000487462 CCL5P13501 91 aa12.5□□□□□ -0.41
CDK11A-217ENST00000487462 BCAMP50895 628 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms