RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 FZD6O60353 706 aa8.36□□□□□ -1.07
SMC4-218ENST00000486711 ABL1P00519 1130 aa8.36□□□□□ -1.07
SMC4-218ENST00000486711 IKBKEQ14164 716 aa8.36□□□□□ -1.07
SMC4-218ENST00000486711 FDX2Q6P4F2 183 aa8.36□□□□□ -1.07
SMC4-218ENST00000486711 FAM20CQ8IXL6 584 aa8.36□□□□□ -1.07
SMC4-218ENST00000486711 AMOTL2Q9Y2J4 779 aa8.36□□□□□ -1.07
SMC4-218ENST00000486711 HIF3AQ9Y2N7 669 aa8.36□□□□□ -1.07
SMC4-218ENST00000486711 CARNS1A5YM72 827 aa8.35□□□□□ -1.07
SMC4-218ENST00000486711 COBLO75128 1261 aa8.35□□□□□ -1.07
SMC4-218ENST00000486711 PREPP48147 710 aa8.35□□□□□ -1.07
SMC4-218ENST00000486711 RNF43Q68DV7 783 aa8.35□□□□□ -1.07
SMC4-218ENST00000486711 CLEC10AQ8IUN9 316 aa8.35□□□□□ -1.07
SMC4-218ENST00000486711 TRIM42Q8IWZ5 723 aa8.35□□□□□ -1.07
SMC4-218ENST00000486711 GJD3Q8N144 294 aa8.35□□□□□ -1.07
SMC4-218ENST00000486711 DBNDD2Q9BQY9 259 aa8.35□□□□□ -1.07
SMC4-218ENST00000486711 BHLHE41Q9C0J9 482 aaPredicted RBP8.35□□□□□ -1.07
SMC4-218ENST00000486711 MEGF11A6BM72 1044 aa8.34□□□□□ -1.07
SMC4-218ENST00000486711 TGFB1P01137 390 aa8.34□□□□□ -1.07
SMC4-218ENST00000486711 ZNF211Q13398 564 aaPredicted RBP8.34□□□□□ -1.07
SMC4-218ENST00000486711 B4GALNT3Q6L9W6 998 aa8.34□□□□□ -1.07
SMC4-218ENST00000486711 VN1R5Q7Z5H4 357 aa8.34□□□□□ -1.07
SMC4-218ENST00000486711 ZDHHC13Q8IUH4 622 aa8.34□□□□□ -1.07
SMC4-218ENST00000486711 ASAP3Q8TDY4 903 aa8.34□□□□□ -1.07
SMC4-218ENST00000486711 SOX17Q9H6I2 414 aaPredicted RBP8.34□□□□□ -1.07
SMC4-218ENST00000486711 USTQ9Y2C2 406 aa8.34□□□□□ -1.07
SMC4-218ENST00000486711 HMX2A2RU54 273 aa8.33□□□□□ -1.08
SMC4-218ENST00000486711 SOX1O00570 391 aaPredicted RBP8.33□□□□□ -1.08
SMC4-218ENST00000486711 GAS2O43903 313 aaKnown RBP8.33□□□□□ -1.08
SMC4-218ENST00000486711 BMP3P12645 472 aa8.33□□□□□ -1.08
SMC4-218ENST00000486711 HGSNATQ68CP4 663 aa8.33□□□□□ -1.08
SMC4-218ENST00000486711 FAM83CQ9BQN1 747 aa8.33□□□□□ -1.08
SMC4-218ENST00000486711 KCNF1Q9H3M0 494 aa8.33□□□□□ -1.08
SMC4-218ENST00000486711 ANO2Q9NQ90 1003 aa8.33□□□□□ -1.08
SMC4-218ENST00000486711 CCDC87Q9NVE4 849 aa8.33□□□□□ -1.08
SMC4-218ENST00000486711 EGFL7Q9UHF1 273 aa8.33□□□□□ -1.08
SMC4-218ENST00000486711 KIAA1324LA8MWY0 1029 aaPredicted RBP8.32□□□□□ -1.08
SMC4-218ENST00000486711 EIF4EBP3O60516 100 aaPredicted RBP8.32□□□□□ -1.08
SMC4-218ENST00000486711 GRIK1P39086 918 aa8.32□□□□□ -1.08
SMC4-218ENST00000486711 BEND4Q6ZU67 534 aa8.32□□□□□ -1.08
SMC4-218ENST00000486711 USP26Q9BXU7 913 aa8.32□□□□□ -1.08
SMC4-218ENST00000486711 ZFYVE28Q9HCC9 887 aa8.32□□□□□ -1.08
SMC4-218ENST00000486711 PEAR1Q5VY43 1037 aaPredicted RBP8.31□□□□□ -1.08
SMC4-218ENST00000486711 NUTM2GQ5VZR2 741 aa8.31□□□□□ -1.08
SMC4-218ENST00000486711 INTS5Q6P9B9 1019 aaKnown RBP8.31□□□□□ -1.08
SMC4-218ENST00000486711 LATS2Q9NRM7 1088 aa8.31□□□□□ -1.08
SMC4-218ENST00000486711 ESRRAP11474 423 aaPredicted RBP8.3□□□□□ -1.08
SMC4-218ENST00000486711 PDE4CQ08493 712 aa8.3□□□□□ -1.08
SMC4-218ENST00000486711 TMPRSS13Q9BYE2 586 aa8.3□□□□□ -1.08
SMC4-218ENST00000486711 CYP4F12Q9HCS2 524 aa8.3□□□□□ -1.08
SMC4-218ENST00000486711 LOC100289279A0A1B0GTE1 492 aa8.29□□□□□ -1.08
SMC4-218ENST00000486711 ICMTO60725 284 aa8.29□□□□□ -1.08
SMC4-218ENST00000486711 SMG8Q8ND04 991 aaKnown RBP8.29□□□□□ -1.08
SMC4-218ENST00000486711 SUGCTQ9HAC7 445 aa8.29□□□□□ -1.08
SMC4-218ENST00000486711 MED26O95402 600 aa8.28□□□□□ -1.08
SMC4-218ENST00000486711 C12orf50Q8NA57 414 aaPredicted RBP8.28□□□□□ -1.08
SMC4-218ENST00000486711 SHKBP1Q8TBC3 707 aa8.28□□□□□ -1.08
SMC4-218ENST00000486711 KRTAP9-2Q9BYQ4 174 aa8.28□□□□□ -1.08
SMC4-218ENST00000486711 BRPF3Q9ULD4 1205 aa8.28□□□□□ -1.08
SMC4-218ENST00000486711 PRR19A6NJB7 356 aa8.27□□□□□ -1.09
SMC4-218ENST00000486711 H3BRB1 525 aa8.27□□□□□ -1.09
SMC4-218ENST00000486711 TIAF1O95411 115 aa8.27□□□□□ -1.09
SMC4-218ENST00000486711 POLR3DP05423 398 aaPredicted RBP8.27□□□□□ -1.09
SMC4-218ENST00000486711 NEFLP07196 543 aa8.27□□□□□ -1.09
SMC4-218ENST00000486711 MAP4P27816 1152 aaKnown RBP8.27□□□□□ -1.09
SMC4-218ENST00000486711 GSTM4Q03013 218 aa8.27□□□□□ -1.09
SMC4-218ENST00000486711 GLYCTKQ8IVS8 523 aa8.27□□□□□ -1.09
SMC4-218ENST00000486711 GALNT12Q8IXK2 581 aa8.27□□□□□ -1.09
SMC4-218ENST00000486711 GIMAP7Q8NHV1 300 aa8.27□□□□□ -1.09
SMC4-218ENST00000486711 TUT1Q9H6E5 874 aaKnown RBP8.27□□□□□ -1.09
SMC4-218ENST00000486711 METTL12A8MUP2 240 aa8.26□□□□□ -1.09
SMC4-218ENST00000486711 SPINK2P20155 84 aa8.26□□□□□ -1.09
SMC4-218ENST00000486711 RXRBP28702 533 aa8.26□□□□□ -1.09
SMC4-218ENST00000486711 SGO2Q562F6 1265 aa8.26□□□□□ -1.09
SMC4-218ENST00000486711 EXOSC6Q5RKV6 272 aaKnown RBP8.26□□□□□ -1.09
SMC4-218ENST00000486711 MCTP1Q6DN14 999 aa8.26□□□□□ -1.09
SMC4-218ENST00000486711 RETREG2Q8NC44 543 aa8.26□□□□□ -1.09
SMC4-218ENST00000486711 LIN7BQ9HAP6 207 aa8.26□□□□□ -1.09
SMC4-218ENST00000486711 A0A096LPE4 126 aa8.25□□□□□ -1.09
SMC4-218ENST00000486711 A0A1W2PP55 124 aa8.25□□□□□ -1.09
SMC4-218ENST00000486711 A0A1W2PPZ6 126 aa8.25□□□□□ -1.09
SMC4-218ENST00000486711 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.25□□□□□ -1.09
SMC4-218ENST00000486711 PCDH1Q08174 1060 aa8.25□□□□□ -1.09
SMC4-218ENST00000486711 CCNJLQ8IV13 435 aa8.25□□□□□ -1.09
SMC4-218ENST00000486711 TRAIPQ9BWF2 469 aa8.25□□□□□ -1.09
SMC4-218ENST00000486711 CLEC4MQ9H2X3 399 aaPredicted RBP8.25□□□□□ -1.09
SMC4-218ENST00000486711 ZBTB7CA1YPR0 619 aa8.24□□□□□ -1.09
SMC4-218ENST00000486711 WDR64B1ANS9 1081 aa8.24□□□□□ -1.09
SMC4-218ENST00000486711 NDUFB5O43674 189 aa8.24□□□□□ -1.09
SMC4-218ENST00000486711 SERPINB4P48594 390 aa8.24□□□□□ -1.09
SMC4-218ENST00000486711 GP2P55259 537 aaKnown RBP8.24□□□□□ -1.09
SMC4-218ENST00000486711 DTX1Q86Y01 620 aa8.24□□□□□ -1.09
SMC4-218ENST00000486711 MFSD14AQ96MC6 490 aa8.24□□□□□ -1.09
SMC4-218ENST00000486711 DLGAP3O95886 979 aa8.23□□□□□ -1.09
SMC4-218ENST00000486711 IRAK1P51617 712 aa8.23□□□□□ -1.09
SMC4-218ENST00000486711 USP11P51784 963 aa8.23□□□□□ -1.09
SMC4-218ENST00000486711 PDE3BQ13370 1112 aa8.23□□□□□ -1.09
SMC4-218ENST00000486711 HP1BP3Q5SSJ5 553 aaPredicted RBP8.23□□□□□ -1.09
SMC4-218ENST00000486711 TCF12Q99081 682 aa8.23□□□□□ -1.09
SMC4-218ENST00000486711 YIPF2Q9BWQ6 316 aa8.23□□□□□ -1.09
SMC4-218ENST00000486711 NRSN2Q9GZP1 204 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms