RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 AK5Q9Y6K8 562 aa5.94□□□□□ -1.46
RTN4-213ENST00000485749 TLDC2A0PJX2 215 aa5.93□□□□□ -1.46
RTN4-213ENST00000485749 SH3PXD2AQ5TCZ1 1133 aa5.93□□□□□ -1.46
RTN4-213ENST00000485749 PSAPL1Q6NUJ1 521 aa5.93□□□□□ -1.46
RTN4-213ENST00000485749 ZNF654Q8IZM8 581 aa5.93□□□□□ -1.46
RTN4-213ENST00000485749 FAM9BQ8IZU0 186 aa5.93□□□□□ -1.46
RTN4-213ENST00000485749 TP53INP1Q96A56 240 aa5.93□□□□□ -1.46
RTN4-213ENST00000485749 NIF3L1Q9GZT8 377 aa5.93□□□□□ -1.46
RTN4-213ENST00000485749 UBA5Q9GZZ9 404 aa5.93□□□□□ -1.46
RTN4-213ENST00000485749 FRRS1LQ9P0K9 344 aa5.93□□□□□ -1.46
RTN4-213ENST00000485749 WWC3Q9ULE0 1092 aa5.93□□□□□ -1.46
RTN4-213ENST00000485749 PNMA6FA0A0J9YX94 578 aa5.92□□□□□ -1.46
RTN4-213ENST00000485749 SELPP16109 830 aa5.92□□□□□ -1.46
RTN4-213ENST00000485749 ARID5AQ03989 594 aa5.92□□□□□ -1.46
RTN4-213ENST00000485749 RTN1Q16799 776 aa5.92□□□□□ -1.46
RTN4-213ENST00000485749 CCDC181Q5TID7 509 aa5.92□□□□□ -1.46
RTN4-213ENST00000485749 VPS37DQ86XT2 251 aa5.92□□□□□ -1.46
RTN4-213ENST00000485749 FMR1NBQ8N0W7 255 aaPredicted RBP5.92□□□□□ -1.46
RTN4-213ENST00000485749 NUDT8Q8WV74 236 aa5.92□□□□□ -1.46
RTN4-213ENST00000485749 DNAJC25Q9H1X3 360 aa5.92□□□□□ -1.46
RTN4-213ENST00000485749 ACBD3Q9H3P7 528 aa5.92□□□□□ -1.46
RTN4-213ENST00000485749 QTRT2Q9H974 415 aaKnown RBP5.92□□□□□ -1.46
RTN4-213ENST00000485749 DNAJB12Q9NXW2 375 aaKnown RBP5.92□□□□□ -1.46
RTN4-213ENST00000485749 SUGT1Q9Y2Z0 365 aa5.92□□□□□ -1.46
RTN4-213ENST00000485749 TGFBR3LH3BV60 316 aa5.91□□□□□ -1.46
RTN4-213ENST00000485749 GIPC1O14908 333 aa5.91□□□□□ -1.46
RTN4-213ENST00000485749 RPLP1P05386 114 aaKnown RBP5.91□□□□□ -1.46
RTN4-213ENST00000485749 GTF2F1P35269 517 aaKnown RBP eCLIP5.91□□□□□ -1.46
RTN4-213ENST00000485749 PTPN12Q05209 780 aaKnown RBP5.91□□□□□ -1.46
RTN4-213ENST00000485749 APBB1IPQ7Z5R6 666 aaPredicted RBP5.91□□□□□ -1.46
RTN4-213ENST00000485749 SLC51AQ86UW1 340 aa5.91□□□□□ -1.46
RTN4-213ENST00000485749 ZNF280CQ8ND82 737 aa5.91□□□□□ -1.46
RTN4-213ENST00000485749 DHX38Q92620 1227 aaKnown RBP5.91□□□□□ -1.46
RTN4-213ENST00000485749 NGLY1Q96IV0 654 aa5.91□□□□□ -1.46
RTN4-213ENST00000485749 CSRNP1Q96S65 589 aa5.91□□□□□ -1.46
RTN4-213ENST00000485749 DDX41Q9UJV9 622 aaKnown RBP5.91□□□□□ -1.46
RTN4-213ENST00000485749 LRFN2Q9ULH4 789 aa5.91□□□□□ -1.46
RTN4-213ENST00000485749 POLIQ9UNA4 740 aa5.91□□□□□ -1.46
RTN4-213ENST00000485749 SPG7Q9UQ90 795 aa5.91□□□□□ -1.46
RTN4-213ENST00000485749 PCSK2P16519 638 aa5.9□□□□□ -1.46
RTN4-213ENST00000485749 AFF1P51825 1210 aaKnown RBP5.9□□□□□ -1.46
RTN4-213ENST00000485749 C11orf91Q3C1V1 193 aa5.9□□□□□ -1.46
RTN4-213ENST00000485749 CCDC144BQ3MJ40 725 aa5.9□□□□□ -1.46
RTN4-213ENST00000485749 FOXD4L6Q3SYB3 417 aaPredicted RBP5.9□□□□□ -1.46
RTN4-213ENST00000485749 MSL1Q68DK7 614 aa5.9□□□□□ -1.46
RTN4-213ENST00000485749 FOXD4L3Q6VB84 417 aaPredicted RBP5.9□□□□□ -1.46
RTN4-213ENST00000485749 DMRTC2Q8IXT2 367 aaPredicted RBP5.9□□□□□ -1.46
RTN4-213ENST00000485749 GSX2Q9BZM3 304 aa5.9□□□□□ -1.46
RTN4-213ENST00000485749 METTL14Q9HCE5 456 aaKnown RBP5.9□□□□□ -1.46
RTN4-213ENST00000485749 RNF19AQ9NV58 838 aa5.9□□□□□ -1.46
RTN4-213ENST00000485749 MAGEC2Q9UBF1 373 aaPredicted RBP5.9□□□□□ -1.46
RTN4-213ENST00000485749 NAP1L2Q9ULW6 460 aaPredicted RBP5.9□□□□□ -1.46
RTN4-213ENST00000485749 ZBTB39O15060 712 aa5.89□□□□□ -1.47
RTN4-213ENST00000485749 RAB11FIP3O75154 756 aa5.89□□□□□ -1.47
RTN4-213ENST00000485749 MAP3K6O95382 1288 aa5.89□□□□□ -1.47
RTN4-213ENST00000485749 NFKB1P19838 968 aa5.89□□□□□ -1.47
RTN4-213ENST00000485749 WDR78Q5VTH9 848 aa5.89□□□□□ -1.47
RTN4-213ENST00000485749 FAM35AQ86V20 835 aa5.89□□□□□ -1.47
RTN4-213ENST00000485749 WFDC8Q8IUA0 241 aa5.89□□□□□ -1.47
RTN4-213ENST00000485749 IPO4Q8TEX9 1081 aaKnown RBP5.89□□□□□ -1.47
RTN4-213ENST00000485749 INPP5FQ9Y2H2 1132 aa5.89□□□□□ -1.47
RTN4-213ENST00000485749 PDGFAP04085 211 aa5.88□□□□□ -1.47
RTN4-213ENST00000485749 CTSHP09668 335 aa5.88□□□□□ -1.47
RTN4-213ENST00000485749 EIF4BP23588 611 aaKnown RBP5.88□□□□□ -1.47
RTN4-213ENST00000485749 DNAJA1P31689 397 aaKnown RBP5.88□□□□□ -1.47
RTN4-213ENST00000485749 ELMSAN1Q6PJG2 1045 aa5.88□□□□□ -1.47
RTN4-213ENST00000485749 IGF2-ASQ6U949 168 aa5.88□□□□□ -1.47
RTN4-213ENST00000485749 FAM43BQ6ZT52 329 aaPredicted RBP5.88□□□□□ -1.47
RTN4-213ENST00000485749 FBXO11Q86XK2 927 aa5.88□□□□□ -1.47
RTN4-213ENST00000485749 TTC9Q92623 222 aa5.88□□□□□ -1.47
RTN4-213ENST00000485749 FAM13BQ9NYF5 915 aa5.88□□□□□ -1.47
RTN4-213ENST00000485749 USP31Q70CQ4 1352 aa5.88□□□□□ -1.47
RTN4-213ENST00000485749 PEX14O75381 377 aa5.87□□□□□ -1.47
RTN4-213ENST00000485749 ZAP70P43403 619 aa5.87□□□□□ -1.47
RTN4-213ENST00000485749 TNNI2P48788 182 aa5.87□□□□□ -1.47
RTN4-213ENST00000485749 ARSDP51689 593 aa5.87□□□□□ -1.47
RTN4-213ENST00000485749 DNM1Q05193 864 aaKnown RBP5.87□□□□□ -1.47
RTN4-213ENST00000485749 LONRF3Q496Y0 759 aa5.87□□□□□ -1.47
RTN4-213ENST00000485749 SDE2Q6IQ49 451 aa5.87□□□□□ -1.47
RTN4-213ENST00000485749 SHISA2Q6UWI4 295 aa5.87□□□□□ -1.47
RTN4-213ENST00000485749 HS2ST1Q7LGA3 356 aa5.87□□□□□ -1.47
RTN4-213ENST00000485749 EDEM1Q92611 657 aa5.87□□□□□ -1.47
RTN4-213ENST00000485749 SGSM3Q96HU1 749 aa5.87□□□□□ -1.47
RTN4-213ENST00000485749 SETDB2Q96T68 719 aa5.87□□□□□ -1.47
RTN4-213ENST00000485749 ANP32EQ9BTT0 268 aa5.87□□□□□ -1.47
RTN4-213ENST00000485749 RBSNQ9H1K0 784 aa5.87□□□□□ -1.47
RTN4-213ENST00000485749 SRA1Q9HD15 236 aaKnown RBP5.87□□□□□ -1.47
RTN4-213ENST00000485749 RNF112Q9ULX5 631 aa5.87□□□□□ -1.47
RTN4-213ENST00000485749 TBX22Q9Y458 520 aa5.87□□□□□ -1.47
RTN4-213ENST00000485749 EIF1AYO14602 144 aaKnown RBP5.86□□□□□ -1.47
RTN4-213ENST00000485749 ANP32CO43423 234 aa5.86□□□□□ -1.47
RTN4-213ENST00000485749 SH3BP5O60239 455 aa5.86□□□□□ -1.47
RTN4-213ENST00000485749 CPB1P15086 417 aa5.86□□□□□ -1.47
RTN4-213ENST00000485749 CALRP27797 417 aaKnown RBP5.86□□□□□ -1.47
RTN4-213ENST00000485749 GJA8P48165 433 aa5.86□□□□□ -1.47
RTN4-213ENST00000485749 ST13P50502 369 aaKnown RBP5.86□□□□□ -1.47
RTN4-213ENST00000485749 RACK1P63244 317 aaKnown RBP5.86□□□□□ -1.47
RTN4-213ENST00000485749 FAM193AP78312 1265 aa5.86□□□□□ -1.47
RTN4-213ENST00000485749 DGKZQ13574 1117 aa5.86□□□□□ -1.47
RTN4-213ENST00000485749 NBPF6Q5VWK0 638 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms