RNA–Protein interactions for RNA: ENST00000485621.1

TRAPPC10-211, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-211ENST00000485621 PREPP48147 710 aa10.69□□□□□ -0.7
TRAPPC10-211ENST00000485621 ANKRD34AQ69YU3 496 aa10.69□□□□□ -0.7
TRAPPC10-211ENST00000485621 TRIM42Q8IWZ5 723 aa10.69□□□□□ -0.7
TRAPPC10-211ENST00000485621 GJD3Q8N144 294 aa10.69□□□□□ -0.7
TRAPPC10-211ENST00000485621 C7orf69Q9H7B7 122 aa10.69□□□□□ -0.7
TRAPPC10-211ENST00000485621 HMX2A2RU54 273 aa10.68□□□□□ -0.7
TRAPPC10-211ENST00000485621 FDX2Q6P4F2 183 aa10.68□□□□□ -0.7
TRAPPC10-211ENST00000485621 VN1R5Q7Z5H4 357 aa10.68□□□□□ -0.7
TRAPPC10-211ENST00000485621 KRTAP4-8Q9BYQ9 185 aa10.68□□□□□ -0.7
TRAPPC10-211ENST00000485621 KCNF1Q9H3M0 494 aa10.68□□□□□ -0.7
TRAPPC10-211ENST00000485621 POLR3DP05423 398 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC10-211ENST00000485621 BMP3P12645 472 aa10.67□□□□□ -0.7
TRAPPC10-211ENST00000485621 USP26Q9BXU7 913 aa10.67□□□□□ -0.7
TRAPPC10-211ENST00000485621 ZFYVE28Q9HCC9 887 aa10.67□□□□□ -0.7
TRAPPC10-211ENST00000485621 TGFB1P01137 390 aa10.66□□□□□ -0.7
TRAPPC10-211ENST00000485621 NFIAQ12857 509 aa10.66□□□□□ -0.7
TRAPPC10-211ENST00000485621 PEAR1Q5VY43 1037 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC10-211ENST00000485621 B4GALNT3Q6L9W6 998 aa10.66□□□□□ -0.7
TRAPPC10-211ENST00000485621 USTQ9Y2C2 406 aa10.66□□□□□ -0.7
TRAPPC10-211ENST00000485621 METTL12A8MUP2 240 aa10.65□□□□□ -0.7
TRAPPC10-211ENST00000485621 H3BRB1 525 aa10.65□□□□□ -0.7
TRAPPC10-211ENST00000485621 GAS2O43903 313 aaKnown RBP10.65□□□□□ -0.7
TRAPPC10-211ENST00000485621 BEND4Q6ZU67 534 aa10.65□□□□□ -0.7
TRAPPC10-211ENST00000485621 FAM20CQ8IXL6 584 aa10.65□□□□□ -0.7
TRAPPC10-211ENST00000485621 BHLHE41Q9C0J9 482 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC10-211ENST00000485621 TUT1Q9H6E5 874 aaKnown RBP10.65□□□□□ -0.7
TRAPPC10-211ENST00000485621 ICMTO60725 284 aa10.64□□□□□ -0.71
TRAPPC10-211ENST00000485621 SERPINB4P48594 390 aa10.64□□□□□ -0.71
TRAPPC10-211ENST00000485621 RNF43Q68DV7 783 aa10.64□□□□□ -0.71
TRAPPC10-211ENST00000485621 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC10-211ENST00000485621 GLYCTKQ8IVS8 523 aa10.64□□□□□ -0.71
TRAPPC10-211ENST00000485621 BRPF3Q9ULD4 1205 aa10.64□□□□□ -0.71
TRAPPC10-211ENST00000485621 CD97P48960 835 aa10.63□□□□□ -0.71
TRAPPC10-211ENST00000485621 NUTM2GQ5VZR2 741 aa10.63□□□□□ -0.71
TRAPPC10-211ENST00000485621 CLEC10AQ8IUN9 316 aa10.63□□□□□ -0.71
TRAPPC10-211ENST00000485621 EGFL7Q9UHF1 273 aa10.63□□□□□ -0.71
TRAPPC10-211ENST00000485621 COBLO75128 1261 aa10.62□□□□□ -0.71
TRAPPC10-211ENST00000485621 ESRRAP11474 423 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC10-211ENST00000485621 ZDHHC13Q8IUH4 622 aa10.62□□□□□ -0.71
TRAPPC10-211ENST00000485621 C12orf50Q8NA57 414 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC10-211ENST00000485621 ARID3AQ99856 593 aa10.62□□□□□ -0.71
TRAPPC10-211ENST00000485621 FAM83CQ9BQN1 747 aa10.62□□□□□ -0.71
TRAPPC10-211ENST00000485621 DBNDD2Q9BQY9 259 aa10.62□□□□□ -0.71
TRAPPC10-211ENST00000485621 LOC100289279A0A1B0GTE1 492 aa10.61□□□□□ -0.71
TRAPPC10-211ENST00000485621 MEGF11A6BM72 1044 aa10.61□□□□□ -0.71
TRAPPC10-211ENST00000485621 GSTM4Q03013 218 aa10.61□□□□□ -0.71
TRAPPC10-211ENST00000485621 MED26O95402 600 aa10.6□□□□□ -0.71
TRAPPC10-211ENST00000485621 SOX17Q9H6I2 414 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC10-211ENST00000485621 HIF3AQ9Y2N7 669 aa10.6□□□□□ -0.71
TRAPPC10-211ENST00000485621 A0A1W2PP55 124 aa10.59□□□□□ -0.71
TRAPPC10-211ENST00000485621 RXRBP28702 533 aa10.59□□□□□ -0.71
TRAPPC10-211ENST00000485621 SGO2Q562F6 1265 aa10.59□□□□□ -0.71
TRAPPC10-211ENST00000485621 TMPRSS13Q9BYE2 586 aa10.59□□□□□ -0.71
TRAPPC10-211ENST00000485621 CYP4F12Q9HCS2 524 aa10.59□□□□□ -0.71
TRAPPC10-211ENST00000485621 DLGAP3O95886 979 aa10.58□□□□□ -0.72
TRAPPC10-211ENST00000485621 MAP4P27816 1152 aaKnown RBP10.58□□□□□ -0.72
TRAPPC10-211ENST00000485621 GRIK1P39086 918 aa10.58□□□□□ -0.72
TRAPPC10-211ENST00000485621 GALNT12Q8IXK2 581 aa10.58□□□□□ -0.72
TRAPPC10-211ENST00000485621 SHKBP1Q8TBC3 707 aa10.58□□□□□ -0.72
TRAPPC10-211ENST00000485621 LIN7BQ9HAP6 207 aa10.58□□□□□ -0.72
TRAPPC10-211ENST00000485621 A0A096LPE4 126 aa10.57□□□□□ -0.72
TRAPPC10-211ENST00000485621 A0A1W2PPZ6 126 aa10.57□□□□□ -0.72
TRAPPC10-211ENST00000485621 NDUFB5O43674 189 aa10.57□□□□□ -0.72
TRAPPC10-211ENST00000485621 SPRED3Q2MJR0 410 aa10.57□□□□□ -0.72
TRAPPC10-211ENST00000485621 USPL1Q5W0Q7 1092 aa10.57□□□□□ -0.72
TRAPPC10-211ENST00000485621 SMG8Q8ND04 991 aaKnown RBP10.57□□□□□ -0.72
TRAPPC10-211ENST00000485621 DRD2P14416 443 aa10.56□□□□□ -0.72
TRAPPC10-211ENST00000485621 GRIA4P48058 902 aa10.56□□□□□ -0.72
TRAPPC10-211ENST00000485621 PCDH1Q08174 1060 aa10.56□□□□□ -0.72
TRAPPC10-211ENST00000485621 ECM1Q16610 540 aa10.56□□□□□ -0.72
TRAPPC10-211ENST00000485621 CCNJLQ8IV13 435 aa10.56□□□□□ -0.72
TRAPPC10-211ENST00000485621 MFSD14AQ96MC6 490 aa10.56□□□□□ -0.72
TRAPPC10-211ENST00000485621 WDR64B1ANS9 1081 aa10.55□□□□□ -0.72
TRAPPC10-211ENST00000485621 NEFLP07196 543 aa10.55□□□□□ -0.72
TRAPPC10-211ENST00000485621 EXOSC6Q5RKV6 272 aaKnown RBP10.55□□□□□ -0.72
TRAPPC10-211ENST00000485621 TCF12Q99081 682 aa10.55□□□□□ -0.72
TRAPPC10-211ENST00000485621 CLEC4MQ9H2X3 399 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC10-211ENST00000485621 SUGCTQ9HAC7 445 aa10.55□□□□□ -0.72
TRAPPC10-211ENST00000485621 PRR19A6NJB7 356 aa10.54□□□□□ -0.72
TRAPPC10-211ENST00000485621 KIAA1324LA8MWY0 1029 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC10-211ENST00000485621 TIAF1O95411 115 aa10.54□□□□□ -0.72
TRAPPC10-211ENST00000485621 USP11P51784 963 aa10.54□□□□□ -0.72
TRAPPC10-211ENST00000485621 ARHGAP4P98171 946 aa10.54□□□□□ -0.72
TRAPPC10-211ENST00000485621 INTS5Q6P9B9 1019 aaKnown RBP10.54□□□□□ -0.72
TRAPPC10-211ENST00000485621 FBXL6Q8N531 539 aa10.54□□□□□ -0.72
TRAPPC10-211ENST00000485621 PDE3BQ13370 1112 aa10.53□□□□□ -0.72
TRAPPC10-211ENST00000485621 ORC1Q13415 861 aa10.53□□□□□ -0.72
TRAPPC10-211ENST00000485621 ZNF423Q2M1K9 1284 aa10.53□□□□□ -0.72
TRAPPC10-211ENST00000485621 TMC1Q8TDI8 760 aa10.53□□□□□ -0.72
TRAPPC10-211ENST00000485621 SUPT5HO00267 1087 aaKnown RBP10.52□□□□□ -0.73
TRAPPC10-211ENST00000485621 EIF4EBP3O60516 100 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC10-211ENST00000485621 NFKBIBQ15653 356 aa10.52□□□□□ -0.73
TRAPPC10-211ENST00000485621 FBLIM1Q8WUP2 373 aa10.52□□□□□ -0.73
TRAPPC10-211ENST00000485621 EHD4Q9H223 541 aa10.52□□□□□ -0.73
TRAPPC10-211ENST00000485621 CPNE3O75131 537 aaKnown RBP10.51□□□□□ -0.73
TRAPPC10-211ENST00000485621 MAOBP27338 520 aa10.51□□□□□ -0.73
TRAPPC10-211ENST00000485621 RETREG2Q8NC44 543 aa10.51□□□□□ -0.73
TRAPPC10-211ENST00000485621 NPHS2Q9NP85 383 aa10.51□□□□□ -0.73
TRAPPC10-211ENST00000485621 FAM95CA0A1B0GW59 222 aa10.5□□□□□ -0.73
TRAPPC10-211ENST00000485621 CYP11A1P05108 521 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms