RNA–Protein interactions for RNA: ENST00000485621.1

TRAPPC10-211, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-211ENST00000485621 AEBP2Q6ZN18 517 aaPredicted RBP36.28■■■■□ 3.4
TRAPPC10-211ENST00000485621 CHIC1Q5VXU3 224 aa34.8■■■■□ 3.16
TRAPPC10-211ENST00000485621 SENP3Q9H4L4 574 aaPredicted RBP30.9■■■□□ 2.54
TRAPPC10-211ENST00000485621 PHF23Q9BUL5 403 aaPredicted RBP30.57■■■□□ 2.48
TRAPPC10-211ENST00000485621 FOXD1Q16676 465 aa28.76■■■□□ 2.19
TRAPPC10-211ENST00000485621 PLPPR3Q6T4P5 718 aa27.99■■■□□ 2.07
TRAPPC10-211ENST00000485621 PPP6R1Q9UPN7 881 aa27.18■■□□□ 1.94
TRAPPC10-211ENST00000485621 ADRA2BP18089 450 aa27.14■■□□□ 1.94
TRAPPC10-211ENST00000485621 PIAS4Q8N2W9 510 aaPredicted RBP27■■□□□ 1.91
TRAPPC10-211ENST00000485621 MSH5O43196 834 aa26.77■■□□□ 1.88
TRAPPC10-211ENST00000485621 POTEDQ86YR6 584 aa25.53■■□□□ 1.68
TRAPPC10-211ENST00000485621 MAPK8IP2Q13387 824 aaPredicted RBP24.83■■□□□ 1.57
TRAPPC10-211ENST00000485621 SCAF1Q9H7N4 1312 aaKnown RBP24.82■■□□□ 1.56
TRAPPC10-211ENST00000485621 PPP4R3CPQ6ZMV5 832 aa24.6■■□□□ 1.53
TRAPPC10-211ENST00000485621 DMRT2Q9Y5R5 561 aa24.54■■□□□ 1.52
TRAPPC10-211ENST00000485621 CNKSR2Q8WXI2 1034 aa24.03■■□□□ 1.44
TRAPPC10-211ENST00000485621 NCBP3Q53F19 620 aaKnown RBP23.77■■□□□ 1.4
TRAPPC10-211ENST00000485621 HOXD11P31277 338 aaPredicted RBP23.76■■□□□ 1.39
TRAPPC10-211ENST00000485621 RNF216Q9NWF9 866 aaPredicted RBP23.71■■□□□ 1.39
TRAPPC10-211ENST00000485621 DCAF8L1A6NGE4 600 aa23.65■■□□□ 1.38
TRAPPC10-211ENST00000485621 NPM3O75607 178 aaKnown RBP23.4■■□□□ 1.34
TRAPPC10-211ENST00000485621 KCNA4P22459 653 aa23.3■■□□□ 1.32
TRAPPC10-211ENST00000485621 RNF39Q9H2S5 420 aa22.86■■□□□ 1.25
TRAPPC10-211ENST00000485621 CACNB1Q02641 598 aaPredicted RBP22.82■■□□□ 1.24
TRAPPC10-211ENST00000485621 DNAJC5BQ9UF47 199 aa22.81■■□□□ 1.24
TRAPPC10-211ENST00000485621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.74■■□□□ 1.23
TRAPPC10-211ENST00000485621 C1QBPQ07021 282 aaKnown RBP22.55■■□□□ 1.2
TRAPPC10-211ENST00000485621 SLC4A2P04920 1241 aa22.24■■□□□ 1.15
TRAPPC10-211ENST00000485621 U3KPZ7 1027 aaPredicted RBP22.24■■□□□ 1.15
TRAPPC10-211ENST00000485621 SLC4A1APQ9BWU0 796 aaKnown RBP22.08■■□□□ 1.13
TRAPPC10-211ENST00000485621 SPINK5Q9NQ38 1064 aaPredicted RBP21.85■■□□□ 1.09
TRAPPC10-211ENST00000485621 CAPN15O75808 1086 aa21.83■■□□□ 1.09
TRAPPC10-211ENST00000485621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.74■■□□□ 1.07
TRAPPC10-211ENST00000485621 HNRNPUL2Q1KMD3 747 aaKnown RBP21.74■■□□□ 1.07
TRAPPC10-211ENST00000485621 APLP2Q06481 763 aa21.68■■□□□ 1.06
TRAPPC10-211ENST00000485621 MYCNP04198 464 aaPredicted RBP21.64■■□□□ 1.05
TRAPPC10-211ENST00000485621 SAMD1Q6SPF0 538 aaPredicted RBP21.64■■□□□ 1.05
TRAPPC10-211ENST00000485621 FOXD4L1Q9NU39 408 aa21.61■■□□□ 1.05
TRAPPC10-211ENST00000485621 TRHP20396 242 aaPredicted RBP21.58■■□□□ 1.05
TRAPPC10-211ENST00000485621 DSG3P32926 999 aa21.55■■□□□ 1.04
TRAPPC10-211ENST00000485621 ZNF219Q9P2Y4 722 aaPredicted RBP21.49■■□□□ 1.03
TRAPPC10-211ENST00000485621 ZBTB22O15209 634 aa21.4■■□□□ 1.02
TRAPPC10-211ENST00000485621 ABCB7O75027 752 aa21.36■■□□□ 1.01
TRAPPC10-211ENST00000485621 ATF5Q9Y2D1 282 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC10-211ENST00000485621 POLA2Q14181 598 aa21.04■□□□□ 0.96
TRAPPC10-211ENST00000485621 ATXN8OSP0DMR3 200 aa20.87■□□□□ 0.93
TRAPPC10-211ENST00000485621 EHMT2Q96KQ7 1210 aa20.77■□□□□ 0.92
TRAPPC10-211ENST00000485621 CSRNP3Q8WYN3 585 aa20.75■□□□□ 0.91
TRAPPC10-211ENST00000485621 ZBTB12Q9Y330 459 aaPredicted RBP20.61■□□□□ 0.89
TRAPPC10-211ENST00000485621 RBM42Q9BTD8 480 aaKnown RBP20.56■□□□□ 0.88
TRAPPC10-211ENST00000485621 OSCARQ8IYS5 282 aa20.37■□□□□ 0.85
TRAPPC10-211ENST00000485621 FBLN2P98095 1184 aa20.3■□□□□ 0.84
TRAPPC10-211ENST00000485621 AKT1S1Q96B36 256 aa20.16■□□□□ 0.82
TRAPPC10-211ENST00000485621 MKRN4PQ13434 485 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC10-211ENST00000485621 POTEHQ6S545 545 aa20.09■□□□□ 0.81
TRAPPC10-211ENST00000485621 SPDYE2BA6NHP3 402 aa20.01■□□□□ 0.79
TRAPPC10-211ENST00000485621 SPDYE6P0CI01 402 aa20.01■□□□□ 0.79
TRAPPC10-211ENST00000485621 SPDYE2Q495Y8 402 aa20.01■□□□□ 0.79
TRAPPC10-211ENST00000485621 REM2Q8IYK8 340 aaPredicted RBP19.99■□□□□ 0.79
TRAPPC10-211ENST00000485621 CHRDL2Q6WN34 429 aa19.98■□□□□ 0.79
TRAPPC10-211ENST00000485621 ZNF692Q9BU19 519 aaPredicted RBP19.87■□□□□ 0.77
TRAPPC10-211ENST00000485621 PITPNM1O00562 1244 aa19.77■□□□□ 0.76
TRAPPC10-211ENST00000485621 SSUH2Q9Y2M2 353 aa19.75■□□□□ 0.75
TRAPPC10-211ENST00000485621 CLEC11AQ9Y240 323 aa19.61■□□□□ 0.73
TRAPPC10-211ENST00000485621 PABPN1Q86U42 306 aaKnown RBP eCLIP19.59■□□□□ 0.73
TRAPPC10-211ENST00000485621 PIP4P2Q8N4L2 257 aa19.58■□□□□ 0.72
TRAPPC10-211ENST00000485621 SPDYE1Q8NFV5 336 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC10-211ENST00000485621 FXR2P51116 673 aaKnown RBP eCLIP19.49■□□□□ 0.71
TRAPPC10-211ENST00000485621 SPDYE4A6NLX3 237 aa19.42■□□□□ 0.7
TRAPPC10-211ENST00000485621 PRR29P0C7W0 189 aa19.3■□□□□ 0.68
TRAPPC10-211ENST00000485621 PRKAR2AP13861 404 aaKnown RBP19.29■□□□□ 0.68
TRAPPC10-211ENST00000485621 HAX1O00165 279 aa19.18■□□□□ 0.66
TRAPPC10-211ENST00000485621 CHADLQ6NUI6 762 aa19.18■□□□□ 0.66
TRAPPC10-211ENST00000485621 STAG3Q9UJ98 1225 aa19.1■□□□□ 0.65
TRAPPC10-211ENST00000485621 SP7Q8TDD2 431 aaPredicted RBP19■□□□□ 0.63
TRAPPC10-211ENST00000485621 EVX2Q03828 476 aa18.92■□□□□ 0.62
TRAPPC10-211ENST00000485621 PROM2Q8N271 834 aa18.91■□□□□ 0.62
TRAPPC10-211ENST00000485621 FARP1Q9Y4F1 1045 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC10-211ENST00000485621 FKBP8Q14318 412 aa18.86■□□□□ 0.61
TRAPPC10-211ENST00000485621 CREBZFQ9NS37 354 aa18.86■□□□□ 0.61
TRAPPC10-211ENST00000485621 C19orf67A6NJJ6 358 aa18.85■□□□□ 0.61
TRAPPC10-211ENST00000485621 CD44P16070 742 aaKnown RBP18.7■□□□□ 0.58
TRAPPC10-211ENST00000485621 NPM1P06748 294 aaKnown RBP eCLIP18.55■□□□□ 0.56
TRAPPC10-211ENST00000485621 MNX1P50219 401 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC10-211ENST00000485621 GABBR2O75899 941 aa18.52■□□□□ 0.56
TRAPPC10-211ENST00000485621 MIER1Q8N108 512 aa18.52■□□□□ 0.56
TRAPPC10-211ENST00000485621 ZRANB1Q9UGI0 708 aa18.5■□□□□ 0.55
TRAPPC10-211ENST00000485621 PLEKHG5O94827 1062 aa18.48■□□□□ 0.55
TRAPPC10-211ENST00000485621 PAK3O75914 559 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC10-211ENST00000485621 PLCD3Q8N3E9 789 aa18.43■□□□□ 0.54
TRAPPC10-211ENST00000485621 ZNF579Q8NAF0 562 aaKnown RBP18.37■□□□□ 0.53
TRAPPC10-211ENST00000485621 FBXO3Q9UK99 471 aa18.32■□□□□ 0.52
TRAPPC10-211ENST00000485621 CLCN6P51797 869 aa18.29■□□□□ 0.52
TRAPPC10-211ENST00000485621 TSPYL2Q9H2G4 693 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC10-211ENST00000485621 PHF12Q96QT6 1004 aa18.27■□□□□ 0.52
TRAPPC10-211ENST00000485621 ZBTB47Q9UFB7 747 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC10-211ENST00000485621 GALR2O43603 387 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC10-211ENST00000485621 RASEFQ8IZ41 740 aa18.16■□□□□ 0.5
TRAPPC10-211ENST00000485621 DCBLD2Q96PD2 775 aa18.14■□□□□ 0.49
TRAPPC10-211ENST00000485621 POTEIP0CG38 1075 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms