RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 SF3B2Q13435 895 aaKnown RBP6.41□□□□□ -1.38
LAPTM4A-202ENST00000483117 SNX29Q8TEQ0 813 aa6.41□□□□□ -1.38
LAPTM4A-202ENST00000483117 WNT8BQ93098 351 aa6.41□□□□□ -1.38
LAPTM4A-202ENST00000483117 UTP4Q969X6 686 aaKnown RBP6.41□□□□□ -1.38
LAPTM4A-202ENST00000483117 NXPE3Q969Y0 559 aa6.41□□□□□ -1.38
LAPTM4A-202ENST00000483117 FAM46AQ96IP4 442 aaKnown RBP6.41□□□□□ -1.38
LAPTM4A-202ENST00000483117 OSGEPQ9NPF4 335 aa6.41□□□□□ -1.38
LAPTM4A-202ENST00000483117 LATS2Q9NRM7 1088 aa6.41□□□□□ -1.38
LAPTM4A-202ENST00000483117 STOML1Q9UBI4 398 aa6.41□□□□□ -1.38
LAPTM4A-202ENST00000483117 MTMR7Q9Y216 660 aa6.41□□□□□ -1.38
LAPTM4A-202ENST00000483117 SSTR4P31391 388 aa6.4□□□□□ -1.38
LAPTM4A-202ENST00000483117 SOX1O00570 391 aaPredicted RBP6.39□□□□□ -1.39
LAPTM4A-202ENST00000483117 IGLV1-40P01703 118 aa6.39□□□□□ -1.39
LAPTM4A-202ENST00000483117 POLR3DP05423 398 aaPredicted RBP6.39□□□□□ -1.39
LAPTM4A-202ENST00000483117 EDN3P14138 238 aa6.39□□□□□ -1.39
LAPTM4A-202ENST00000483117 USP5P45974 858 aa6.39□□□□□ -1.39
LAPTM4A-202ENST00000483117 PREPP48147 710 aa6.39□□□□□ -1.39
LAPTM4A-202ENST00000483117 EHHADHQ08426 723 aa6.39□□□□□ -1.39
LAPTM4A-202ENST00000483117 PEAR1Q5VY43 1037 aaPredicted RBP6.39□□□□□ -1.39
LAPTM4A-202ENST00000483117 VN1R5Q7Z5H4 357 aa6.39□□□□□ -1.39
LAPTM4A-202ENST00000483117 TRIM42Q8IWZ5 723 aa6.39□□□□□ -1.39
LAPTM4A-202ENST00000483117 ASAP3Q8TDY4 903 aa6.39□□□□□ -1.39
LAPTM4A-202ENST00000483117 BSNDQ8WZ55 320 aa6.39□□□□□ -1.39
LAPTM4A-202ENST00000483117 RUSC1Q9BVN2 902 aa6.39□□□□□ -1.39
LAPTM4A-202ENST00000483117 AMOTL2Q9Y2J4 779 aa6.39□□□□□ -1.39
LAPTM4A-202ENST00000483117 COL17A1Q9UMD9 1497 aaPredicted RBP6.39□□□□□ -1.39
LAPTM4A-202ENST00000483117 HMX2A2RU54 273 aa6.38□□□□□ -1.39
LAPTM4A-202ENST00000483117 SART1O43290 800 aaKnown RBP6.38□□□□□ -1.39
LAPTM4A-202ENST00000483117 ARL4DP49703 201 aa6.38□□□□□ -1.39
LAPTM4A-202ENST00000483117 C19orf57Q0VDD7 668 aa6.38□□□□□ -1.39
LAPTM4A-202ENST00000483117 IKBKEQ14164 716 aa6.38□□□□□ -1.39
LAPTM4A-202ENST00000483117 UVSSAQ2YD98 709 aa6.38□□□□□ -1.39
LAPTM4A-202ENST00000483117 SLC51AQ86UW1 340 aa6.38□□□□□ -1.39
LAPTM4A-202ENST00000483117 GJD3Q8N144 294 aa6.38□□□□□ -1.39
LAPTM4A-202ENST00000483117 MYRFLQ96LU7 910 aa6.38□□□□□ -1.39
LAPTM4A-202ENST00000483117 RNF208Q9H0X6 261 aa6.38□□□□□ -1.39
LAPTM4A-202ENST00000483117 C7orf69Q9H7B7 122 aa6.38□□□□□ -1.39
LAPTM4A-202ENST00000483117 ZFYVE28Q9HCC9 887 aa6.38□□□□□ -1.39
LAPTM4A-202ENST00000483117 PCMTD2Q9NV79 361 aa6.38□□□□□ -1.39
LAPTM4A-202ENST00000483117 METTL12A8MUP2 240 aa6.37□□□□□ -1.39
LAPTM4A-202ENST00000483117 TGFB1P01137 390 aa6.37□□□□□ -1.39
LAPTM4A-202ENST00000483117 SERPINB4P48594 390 aa6.37□□□□□ -1.39
LAPTM4A-202ENST00000483117 GSC2O15499 205 aa6.36□□□□□ -1.39
LAPTM4A-202ENST00000483117 ICMTO60725 284 aa6.36□□□□□ -1.39
LAPTM4A-202ENST00000483117 MED26O95402 600 aa6.36□□□□□ -1.39
LAPTM4A-202ENST00000483117 BMP3P12645 472 aa6.36□□□□□ -1.39
LAPTM4A-202ENST00000483117 NFIAQ12857 509 aa6.36□□□□□ -1.39
LAPTM4A-202ENST00000483117 ANKRD34AQ69YU3 496 aa6.36□□□□□ -1.39
LAPTM4A-202ENST00000483117 FDX2Q6P4F2 183 aa6.36□□□□□ -1.39
LAPTM4A-202ENST00000483117 FAM20CQ8IXL6 584 aa6.36□□□□□ -1.39
LAPTM4A-202ENST00000483117 USP26Q9BXU7 913 aa6.36□□□□□ -1.39
LAPTM4A-202ENST00000483117 BHLHE41Q9C0J9 482 aaPredicted RBP6.36□□□□□ -1.39
LAPTM4A-202ENST00000483117 KCNF1Q9H3M0 494 aa6.36□□□□□ -1.39
LAPTM4A-202ENST00000483117 H3BRB1 525 aa6.35□□□□□ -1.39
LAPTM4A-202ENST00000483117 CD97P48960 835 aa6.35□□□□□ -1.39
LAPTM4A-202ENST00000483117 ECM1Q16610 540 aa6.35□□□□□ -1.39
LAPTM4A-202ENST00000483117 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.35□□□□□ -1.39
LAPTM4A-202ENST00000483117 ZDHHC13Q8IUH4 622 aa6.35□□□□□ -1.39
LAPTM4A-202ENST00000483117 ARID3AQ99856 593 aa6.35□□□□□ -1.39
LAPTM4A-202ENST00000483117 TUT1Q9H6E5 874 aaKnown RBP6.35□□□□□ -1.39
LAPTM4A-202ENST00000483117 USTQ9Y2C2 406 aa6.35□□□□□ -1.39
LAPTM4A-202ENST00000483117 LOC100289279A0A1B0GTE1 492 aa6.34□□□□□ -1.39
LAPTM4A-202ENST00000483117 DLGAP3O95886 979 aa6.34□□□□□ -1.39
LAPTM4A-202ENST00000483117 ESRRAP11474 423 aaPredicted RBP6.34□□□□□ -1.39
LAPTM4A-202ENST00000483117 USPL1Q5W0Q7 1092 aa6.34□□□□□ -1.39
LAPTM4A-202ENST00000483117 RNF43Q68DV7 783 aa6.34□□□□□ -1.39
LAPTM4A-202ENST00000483117 BEND4Q6ZU67 534 aa6.34□□□□□ -1.39
LAPTM4A-202ENST00000483117 CLEC10AQ8IUN9 316 aa6.34□□□□□ -1.39
LAPTM4A-202ENST00000483117 FAM83CQ9BQN1 747 aa6.34□□□□□ -1.39
LAPTM4A-202ENST00000483117 EGFL7Q9UHF1 273 aa6.34□□□□□ -1.39
LAPTM4A-202ENST00000483117 MEGF11A6BM72 1044 aa6.33□□□□□ -1.4
LAPTM4A-202ENST00000483117 GAS2O43903 313 aaKnown RBP6.33□□□□□ -1.4
LAPTM4A-202ENST00000483117 GSTM4Q03013 218 aa6.33□□□□□ -1.4
LAPTM4A-202ENST00000483117 SGO2Q562F6 1265 aa6.33□□□□□ -1.4
LAPTM4A-202ENST00000483117 GLYCTKQ8IVS8 523 aa6.33□□□□□ -1.4
LAPTM4A-202ENST00000483117 DBNDD2Q9BQY9 259 aa6.33□□□□□ -1.4
LAPTM4A-202ENST00000483117 TMPRSS13Q9BYE2 586 aa6.33□□□□□ -1.4
LAPTM4A-202ENST00000483117 BRPF3Q9ULD4 1205 aa6.33□□□□□ -1.4
LAPTM4A-202ENST00000483117 A0A096LPE4 126 aa6.32□□□□□ -1.4
LAPTM4A-202ENST00000483117 A0A1W2PP55 124 aa6.32□□□□□ -1.4
LAPTM4A-202ENST00000483117 A0A1W2PPZ6 126 aa6.32□□□□□ -1.4
LAPTM4A-202ENST00000483117 PRR19A6NJB7 356 aa6.32□□□□□ -1.4
LAPTM4A-202ENST00000483117 GRIA4P48058 902 aa6.32□□□□□ -1.4
LAPTM4A-202ENST00000483117 ARHGAP4P98171 946 aa6.32□□□□□ -1.4
LAPTM4A-202ENST00000483117 SPRED3Q2MJR0 410 aa6.32□□□□□ -1.4
LAPTM4A-202ENST00000483117 LCE4AQ5TA78 99 aa6.32□□□□□ -1.4
LAPTM4A-202ENST00000483117 NUTM2GQ5VZR2 741 aa6.32□□□□□ -1.4
LAPTM4A-202ENST00000483117 B4GALNT3Q6L9W6 998 aa6.32□□□□□ -1.4
LAPTM4A-202ENST00000483117 GALNT12Q8IXK2 581 aa6.32□□□□□ -1.4
LAPTM4A-202ENST00000483117 C12orf50Q8NA57 414 aaPredicted RBP6.32□□□□□ -1.4
LAPTM4A-202ENST00000483117 SHKBP1Q8TBC3 707 aa6.32□□□□□ -1.4
LAPTM4A-202ENST00000483117 TCF12Q99081 682 aa6.32□□□□□ -1.4
LAPTM4A-202ENST00000483117 SOX17Q9H6I2 414 aaPredicted RBP6.32□□□□□ -1.4
LAPTM4A-202ENST00000483117 LIN7BQ9HAP6 207 aa6.32□□□□□ -1.4
LAPTM4A-202ENST00000483117 DRD2P14416 443 aa6.31□□□□□ -1.4
LAPTM4A-202ENST00000483117 MAP4P27816 1152 aaKnown RBP6.31□□□□□ -1.4
LAPTM4A-202ENST00000483117 RXRBP28702 533 aa6.31□□□□□ -1.4
LAPTM4A-202ENST00000483117 CCNJLQ8IV13 435 aa6.31□□□□□ -1.4
LAPTM4A-202ENST00000483117 SMG8Q8ND04 991 aaKnown RBP6.31□□□□□ -1.4
LAPTM4A-202ENST00000483117 HIF3AQ9Y2N7 669 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms