RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 TPTE2Q6XPS3 522 aa16.47■□□□□ 0.23
COL20A1-206ENST00000479501 COPRSQ9NQ92 184 aa16.47■□□□□ 0.23
COL20A1-206ENST00000479501 ERBB4Q15303 1308 aa16.47■□□□□ 0.23
COL20A1-206ENST00000479501 GPAA1O43292 621 aa16.47■□□□□ 0.23
COL20A1-206ENST00000479501 BRAPQ7Z569 592 aa16.47■□□□□ 0.23
COL20A1-206ENST00000479501 MBD4O95243 580 aa16.46■□□□□ 0.23
COL20A1-206ENST00000479501 RXRAP19793 462 aa16.46■□□□□ 0.23
COL20A1-206ENST00000479501 NCOA5Q9HCD5 579 aaKnown RBP16.46■□□□□ 0.23
COL20A1-206ENST00000479501 PUM3Q15397 648 aaKnown RBP16.46■□□□□ 0.23
COL20A1-206ENST00000479501 PARP10Q53GL7 1025 aa16.46■□□□□ 0.23
COL20A1-206ENST00000479501 ATL3Q6DD88 541 aa16.46■□□□□ 0.23
COL20A1-206ENST00000479501 POLR3GO15318 223 aaPredicted RBP16.46■□□□□ 0.23
COL20A1-206ENST00000479501 C8orf37Q96NL8 207 aa16.46■□□□□ 0.23
COL20A1-206ENST00000479501 CDCA7Q9BWT1 371 aaPredicted RBP16.46■□□□□ 0.23
COL20A1-206ENST00000479501 POLR1AO95602 1720 aaPredicted RBP16.46■□□□□ 0.23
COL20A1-206ENST00000479501 GADD45BO75293 160 aaPredicted RBP16.46■□□□□ 0.22
COL20A1-206ENST00000479501 NOLC1Q14978 699 aaKnown RBP eCLIP16.46■□□□□ 0.22
COL20A1-206ENST00000479501 ME3Q16798 604 aa16.46■□□□□ 0.22
COL20A1-206ENST00000479501 UBA7P41226 1012 aa16.45■□□□□ 0.22
COL20A1-206ENST00000479501 TMOD2Q9NZR1 351 aa16.45■□□□□ 0.22
COL20A1-206ENST00000479501 ANKARQ7Z5J8 1434 aa16.45■□□□□ 0.22
COL20A1-206ENST00000479501 NYXQ9GZU5 481 aa16.45■□□□□ 0.22
COL20A1-206ENST00000479501 LUC7LQ9NQ29 371 aaKnown RBP16.45■□□□□ 0.22
COL20A1-206ENST00000479501 TMEM63CQ9P1W3 806 aa16.45■□□□□ 0.22
COL20A1-206ENST00000479501 ARHGEF40Q8TER5 1519 aa16.45■□□□□ 0.22
COL20A1-206ENST00000479501 FAM193AP78312 1265 aa16.44■□□□□ 0.22
COL20A1-206ENST00000479501 RASEFQ8IZ41 740 aa16.44■□□□□ 0.22
COL20A1-206ENST00000479501 AOPEPQ8N6M6 819 aa16.44■□□□□ 0.22
COL20A1-206ENST00000479501 CCDC12Q8WUD4 166 aaPredicted RBP16.44■□□□□ 0.22
COL20A1-206ENST00000479501 RAB34Q9BZG1 259 aa16.44■□□□□ 0.22
COL20A1-206ENST00000479501 VAT1LQ9HCJ6 419 aa16.44■□□□□ 0.22
COL20A1-206ENST00000479501 GOLGA6L10A6NI86 522 aa16.44■□□□□ 0.22
COL20A1-206ENST00000479501 B4E1Z4 1266 aa16.44■□□□□ 0.22
COL20A1-206ENST00000479501 BMP15O95972 392 aa16.44■□□□□ 0.22
COL20A1-206ENST00000479501 ZAP70P43403 619 aa16.44■□□□□ 0.22
COL20A1-206ENST00000479501 CCDC96Q2M329 555 aa16.44■□□□□ 0.22
COL20A1-206ENST00000479501 ZSWIM6Q9HCJ5 1215 aa16.44■□□□□ 0.22
COL20A1-206ENST00000479501 UBAP1LF5GYI3 381 aa16.44■□□□□ 0.22
COL20A1-206ENST00000479501 GTF2F1P35269 517 aaKnown RBP eCLIP16.44■□□□□ 0.22
COL20A1-206ENST00000479501 GSTO1P78417 241 aa16.44■□□□□ 0.22
COL20A1-206ENST00000479501 ZNF76P36508 570 aa16.44■□□□□ 0.22
COL20A1-206ENST00000479501 LSG1Q9H089 658 aaKnown RBP16.44■□□□□ 0.22
COL20A1-206ENST00000479501 RRAGDQ9NQL2 400 aaPredicted RBP16.44■□□□□ 0.22
COL20A1-206ENST00000479501 TCP11L1Q9NUJ3 509 aa16.44■□□□□ 0.22
COL20A1-206ENST00000479501 LRRC7Q96NW7 1537 aa16.43■□□□□ 0.22
COL20A1-206ENST00000479501 PTPRMP28827 1452 aa16.43■□□□□ 0.22
COL20A1-206ENST00000479501 CPLX3Q8WVH0 158 aa16.43■□□□□ 0.22
COL20A1-206ENST00000479501 CAMSAP1Q5T5Y3 1602 aa16.43■□□□□ 0.22
COL20A1-206ENST00000479501 CT47A1Q5JQC4 288 aaPredicted RBP16.43■□□□□ 0.22
COL20A1-206ENST00000479501 CCDC181Q5TID7 509 aa16.43■□□□□ 0.22
COL20A1-206ENST00000479501 DSCC1Q9BVC3 393 aa16.43■□□□□ 0.22
COL20A1-206ENST00000479501 JAK2O60674 1132 aa16.43■□□□□ 0.22
COL20A1-206ENST00000479501 CDC37L1Q7L3B6 337 aa16.43■□□□□ 0.22
COL20A1-206ENST00000479501 LPIN2Q92539 896 aa16.43■□□□□ 0.22
COL20A1-206ENST00000479501 SEC62Q99442 399 aaKnown RBP16.43■□□□□ 0.22
COL20A1-206ENST00000479501 PYM1Q9BRP8 204 aaKnown RBP16.43■□□□□ 0.22
COL20A1-206ENST00000479501 ANGEL1Q9UNK9 670 aaKnown RBP16.43■□□□□ 0.22
COL20A1-206ENST00000479501 RTCBQ9Y3I0 505 aaKnown RBP16.43■□□□□ 0.22
COL20A1-206ENST00000479501 LUZP1Q86V48 1076 aa16.42■□□□□ 0.22
COL20A1-206ENST00000479501 MYO6Q9UM54 1294 aa16.42■□□□□ 0.22
COL20A1-206ENST00000479501 DIP2CQ9Y2E4 1556 aa16.42■□□□□ 0.22
COL20A1-206ENST00000479501 TRIM75PA6NK02 468 aa16.42■□□□□ 0.22
COL20A1-206ENST00000479501 TMEM87BQ96K49 555 aa16.42■□□□□ 0.22
COL20A1-206ENST00000479501 GBP3Q9H0R5 595 aa16.42■□□□□ 0.22
COL20A1-206ENST00000479501 UBASH3AP57075 661 aa16.42■□□□□ 0.22
COL20A1-206ENST00000479501 HAUS7Q99871 368 aa16.42■□□□□ 0.22
COL20A1-206ENST00000479501 TMEM266Q2M3C6 531 aa16.42■□□□□ 0.22
COL20A1-206ENST00000479501 LEO1Q8WVC0 666 aaPredicted RBP16.42■□□□□ 0.22
COL20A1-206ENST00000479501 DBNLQ9UJU6 430 aaKnown RBP16.42■□□□□ 0.22
COL20A1-206ENST00000479501 TSPY3P0CV98 308 aa16.41■□□□□ 0.22
COL20A1-206ENST00000479501 TSPY8P0CW00 308 aa16.41■□□□□ 0.22
COL20A1-206ENST00000479501 SKILP12757 684 aa16.41■□□□□ 0.22
COL20A1-206ENST00000479501 PPP1R1BQ9UD71 204 aaPredicted RBP16.41■□□□□ 0.22
COL20A1-206ENST00000479501 KIDINS220Q9ULH0 1771 aa16.41■□□□□ 0.22
COL20A1-206ENST00000479501 NEXMIFQ5QGS0 1516 aa16.41■□□□□ 0.22
COL20A1-206ENST00000479501 GNAQP50148 359 aa16.41■□□□□ 0.22
COL20A1-206ENST00000479501 FAM160A1Q05DH4 1040 aa16.41■□□□□ 0.22
COL20A1-206ENST00000479501 CCDC150Q8NCX0 1101 aa16.41■□□□□ 0.22
COL20A1-206ENST00000479501 MAP4K1Q92918 833 aa16.41■□□□□ 0.22
COL20A1-206ENST00000479501 ZKSCAN3Q9BRR0 538 aa16.41■□□□□ 0.22
COL20A1-206ENST00000479501 CRACR2AQ9BSW2 395 aa16.41■□□□□ 0.22
COL20A1-206ENST00000479501 CCDC87Q9NVE4 849 aa16.41■□□□□ 0.22
COL20A1-206ENST00000479501 A0A1B0GVL5 298 aa16.41■□□□□ 0.22
COL20A1-206ENST00000479501 ST5P78524 1137 aa16.41■□□□□ 0.22
COL20A1-206ENST00000479501 SF3B2Q13435 895 aaKnown RBP16.41■□□□□ 0.22
COL20A1-206ENST00000479501 POLA2Q14181 598 aa16.41■□□□□ 0.22
COL20A1-206ENST00000479501 CENPHQ9H3R5 247 aa16.41■□□□□ 0.22
COL20A1-206ENST00000479501 RGS12O14924 1447 aa16.4■□□□□ 0.22
COL20A1-206ENST00000479501 E7EWF7 191 aa16.4■□□□□ 0.22
COL20A1-206ENST00000479501 TAF5LO75529 589 aa16.4■□□□□ 0.22
COL20A1-206ENST00000479501 CALM1P0DP23 149 aa16.4■□□□□ 0.22
COL20A1-206ENST00000479501 CALM2P0DP24 149 aa16.4■□□□□ 0.22
COL20A1-206ENST00000479501 CALM3P0DP25 149 aa16.4■□□□□ 0.22
COL20A1-206ENST00000479501 KIAA1328Q86T90 577 aa16.4■□□□□ 0.22
COL20A1-206ENST00000479501 LMOD1P29536 600 aaPredicted RBP16.4■□□□□ 0.22
COL20A1-206ENST00000479501 AFMP43652 599 aa16.4■□□□□ 0.22
COL20A1-206ENST00000479501 LRRC24Q50LG9 513 aa16.4■□□□□ 0.22
COL20A1-206ENST00000479501 TXLNBQ8N3L3 684 aa16.4■□□□□ 0.22
COL20A1-206ENST00000479501 TLR7Q9NYK1 1049 aaKnown RBP16.4■□□□□ 0.22
COL20A1-206ENST00000479501 TPCN1Q9ULQ1 816 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms