RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 E7EWF7 191 aa16.46■□□□□ 0.23
CCDC78-210ENST00000478979 ARID5BQ14865 1188 aa16.46■□□□□ 0.23
CCDC78-210ENST00000478979 ERO1AQ96HE7 468 aa16.46■□□□□ 0.23
CCDC78-210ENST00000478979 PGBD1Q96JS3 809 aa16.46■□□□□ 0.23
CCDC78-210ENST00000478979 ZNF446Q9NWS9 450 aa16.46■□□□□ 0.23
CCDC78-210ENST00000478979 ADAMTS7Q9UKP4 1686 aa16.46■□□□□ 0.22
CCDC78-210ENST00000478979 ZNF335Q9H4Z2 1342 aaPredicted RBP16.45■□□□□ 0.22
CCDC78-210ENST00000478979 PTPDC1A2A3K4 754 aa16.45■□□□□ 0.22
CCDC78-210ENST00000478979 NPHP1O15259 732 aa16.45■□□□□ 0.22
CCDC78-210ENST00000478979 XAGE2Q96GT9 111 aa16.45■□□□□ 0.22
CCDC78-210ENST00000478979 SLAIN2Q9P270 581 aa16.45■□□□□ 0.22
CCDC78-210ENST00000478979 HLFQ16534 295 aa16.45■□□□□ 0.22
CCDC78-210ENST00000478979 CCDC191Q8NCU4 936 aa16.45■□□□□ 0.22
CCDC78-210ENST00000478979 NOL10Q9BSC4 688 aaKnown RBP16.45■□□□□ 0.22
CCDC78-210ENST00000478979 GJB4Q9NTQ9 266 aa16.45■□□□□ 0.22
CCDC78-210ENST00000478979 ZAP70P43403 619 aa16.44■□□□□ 0.22
CCDC78-210ENST00000478979 DHX32Q7L7V1 743 aaKnown RBP16.44■□□□□ 0.22
CCDC78-210ENST00000478979 LRRC8AQ8IWT6 810 aa16.44■□□□□ 0.22
CCDC78-210ENST00000478979 HELBQ8NG08 1087 aaPredicted RBP16.44■□□□□ 0.22
CCDC78-210ENST00000478979 ZNF165P49910 485 aa16.44■□□□□ 0.22
CCDC78-210ENST00000478979 NYAP1Q6ZVC0 841 aa16.44■□□□□ 0.22
CCDC78-210ENST00000478979 STK11IPQ8N1F8 1099 aa16.44■□□□□ 0.22
CCDC78-210ENST00000478979 TRIM34Q9BYJ4 488 aa16.44■□□□□ 0.22
CCDC78-210ENST00000478979 DNAJC25Q9H1X3 360 aa16.44■□□□□ 0.22
CCDC78-210ENST00000478979 RNF113AO15541 343 aaKnown RBP16.44■□□□□ 0.22
CCDC78-210ENST00000478979 CCDC158Q5M9N0 1113 aa16.44■□□□□ 0.22
CCDC78-210ENST00000478979 ERVV-2B6SEH9 535 aa16.43■□□□□ 0.22
CCDC78-210ENST00000478979 SNAP23O00161 211 aa16.43■□□□□ 0.22
CCDC78-210ENST00000478979 CYP2C19P33261 490 aa16.43■□□□□ 0.22
CCDC78-210ENST00000478979 HNRNPH2P55795 449 aaKnown RBP16.43■□□□□ 0.22
CCDC78-210ENST00000478979 ZMYM1Q5SVZ6 1142 aa16.43■□□□□ 0.22
CCDC78-210ENST00000478979 PIGBQ92521 554 aa16.43■□□□□ 0.22
CCDC78-210ENST00000478979 SCAND2PQ9GZW5 306 aaPredicted RBP16.43■□□□□ 0.22
CCDC78-210ENST00000478979 DENND2AQ9ULE3 1009 aa16.43■□□□□ 0.22
CCDC78-210ENST00000478979 TBC1D2BQ9UPU7 963 aa16.43■□□□□ 0.22
CCDC78-210ENST00000478979 CTDNEP1O95476 244 aa16.43■□□□□ 0.22
CCDC78-210ENST00000478979 FAM193AP78312 1265 aa16.43■□□□□ 0.22
CCDC78-210ENST00000478979 METTL24Q5JXM2 366 aa16.43■□□□□ 0.22
CCDC78-210ENST00000478979 KIF6Q6ZMV9 814 aa16.43■□□□□ 0.22
CCDC78-210ENST00000478979 TRMT1Q9NXH9 659 aaKnown RBP16.43■□□□□ 0.22
CCDC78-210ENST00000478979 RXRAP19793 462 aa16.42■□□□□ 0.22
CCDC78-210ENST00000478979 NSUN7Q8NE18 718 aaKnown RBP16.42■□□□□ 0.22
CCDC78-210ENST00000478979 PUS7LQ9H0K6 701 aaKnown RBP16.42■□□□□ 0.22
CCDC78-210ENST00000478979 BTG4Q9NY30 223 aa16.42■□□□□ 0.22
CCDC78-210ENST00000478979 SLU7O95391 586 aaKnown RBP16.42■□□□□ 0.22
CCDC78-210ENST00000478979 APPP05067 770 aa16.42■□□□□ 0.22
CCDC78-210ENST00000478979 RESTQ13127 1097 aa16.42■□□□□ 0.22
CCDC78-210ENST00000478979 IFIT5Q13325 482 aaKnown RBP16.42■□□□□ 0.22
CCDC78-210ENST00000478979 TCIRG1Q13488 830 aa16.42■□□□□ 0.22
CCDC78-210ENST00000478979 TSGA10IPQ3SY00 556 aa16.42■□□□□ 0.22
CCDC78-210ENST00000478979 CREBRFQ8IUR6 639 aa16.42■□□□□ 0.22
CCDC78-210ENST00000478979 POLR3DP05423 398 aaPredicted RBP16.42■□□□□ 0.22
CCDC78-210ENST00000478979 LDHAL6AQ6ZMR3 332 aa16.42■□□□□ 0.22
CCDC78-210ENST00000478979 GREM2Q9H772 168 aa16.42■□□□□ 0.22
CCDC78-210ENST00000478979 CNNM1Q9NRU3 951 aa16.42■□□□□ 0.22
CCDC78-210ENST00000478979 SH3TC1Q8TE82 1336 aa16.41■□□□□ 0.22
CCDC78-210ENST00000478979 MRC1P22897 1456 aa16.41■□□□□ 0.22
CCDC78-210ENST00000478979 SKILP12757 684 aa16.41■□□□□ 0.22
CCDC78-210ENST00000478979 IDH1O75874 414 aaKnown RBP16.41■□□□□ 0.22
CCDC78-210ENST00000478979 HELLSQ9NRZ9 838 aa16.41■□□□□ 0.22
CCDC78-210ENST00000478979 ELP1O95163 1332 aa16.41■□□□□ 0.22
CCDC78-210ENST00000478979 JCADQ9P266 1359 aa16.41■□□□□ 0.22
CCDC78-210ENST00000478979 CDC25BP30305 580 aa16.4■□□□□ 0.22
CCDC78-210ENST00000478979 BMS1Q14692 1282 aaKnown RBP16.4■□□□□ 0.22
CCDC78-210ENST00000478979 CLSTN2Q9H4D0 955 aa16.4■□□□□ 0.22
CCDC78-210ENST00000478979 DDX19AQ9NUU7 478 aaKnown RBP16.4■□□□□ 0.22
CCDC78-210ENST00000478979 RBM43Q6ZSC3 357 aaKnown RBP16.4■□□□□ 0.22
CCDC78-210ENST00000478979 USP28Q96RU2 1077 aa16.4■□□□□ 0.22
CCDC78-210ENST00000478979 ITGA6P23229 1130 aa16.39■□□□□ 0.22
CCDC78-210ENST00000478979 COL5A2P05997 1499 aaPredicted RBP16.39■□□□□ 0.21
CCDC78-210ENST00000478979 PFKFB2O60825 505 aa16.39■□□□□ 0.21
CCDC78-210ENST00000478979 FGAP02671 866 aa16.39■□□□□ 0.21
CCDC78-210ENST00000478979 PDIA3P30101 505 aaKnown RBP16.39■□□□□ 0.21
CCDC78-210ENST00000478979 ME1P48163 572 aa16.39■□□□□ 0.21
CCDC78-210ENST00000478979 FEZ2Q9UHY8 353 aaPredicted RBP16.39■□□□□ 0.21
CCDC78-210ENST00000478979 CPDO75976 1380 aa16.39■□□□□ 0.21
CCDC78-210ENST00000478979 ERCC6LQ2NKX8 1250 aa16.39■□□□□ 0.21
CCDC78-210ENST00000478979 CARD10Q9BWT7 1032 aa16.39■□□□□ 0.21
CCDC78-210ENST00000478979 TRMT112Q9UI30 125 aaKnown RBP16.39■□□□□ 0.21
CCDC78-210ENST00000478979 FHOD1Q9Y613 1164 aa16.39■□□□□ 0.21
CCDC78-210ENST00000478979 CCDC69A6NI79 296 aa16.38■□□□□ 0.21
CCDC78-210ENST00000478979 NEMFO60524 1076 aa16.38■□□□□ 0.21
CCDC78-210ENST00000478979 H2AFXP16104 143 aaPredicted RBP16.38■□□□□ 0.21
CCDC78-210ENST00000478979 DSCC1Q9BVC3 393 aa16.38■□□□□ 0.21
CCDC78-210ENST00000478979 TSPYL1Q9H0U9 437 aa16.38■□□□□ 0.21
CCDC78-210ENST00000478979 INCENPQ9NQS7 918 aa16.38■□□□□ 0.21
CCDC78-210ENST00000478979 KLF18A0A0U1RQI7 1052 aa16.38■□□□□ 0.21
CCDC78-210ENST00000478979 RAD51AP2Q09MP3 1159 aa16.38■□□□□ 0.21
CCDC78-210ENST00000478979 FILIP1Q7Z7B0 1213 aa16.38■□□□□ 0.21
CCDC78-210ENST00000478979 CCAR1Q8IX12 1150 aaKnown RBP16.38■□□□□ 0.21
CCDC78-210ENST00000478979 CCAR2Q8N163 923 aaKnown RBP16.38■□□□□ 0.21
CCDC78-210ENST00000478979 ISCA1Q9BUE6 129 aa16.38■□□□□ 0.21
CCDC78-210ENST00000478979 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.38■□□□□ 0.21
CCDC78-210ENST00000478979 ZBTB1Q9Y2K1 713 aa16.38■□□□□ 0.21
CCDC78-210ENST00000478979 PALLDQ8WX93 1383 aa16.38■□□□□ 0.21
CCDC78-210ENST00000478979 GOLGA6L19H0YKK7 550 aa16.37■□□□□ 0.21
CCDC78-210ENST00000478979 CCZ1BP86790 482 aa16.37■□□□□ 0.21
CCDC78-210ENST00000478979 CCZ1P86791 482 aaPredicted RBP16.37■□□□□ 0.21
CCDC78-210ENST00000478979 NKX2-3Q8TAU0 364 aa16.37■□□□□ 0.21
CCDC78-210ENST00000478979 ATG3Q9NT62 314 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms