RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 CCDC87Q9NVE4 849 aa8.58□□□□□ -1.04
LMBR1-216ENST00000477983 USTQ9Y2C2 406 aa8.58□□□□□ -1.04
LMBR1-216ENST00000477983 CD97P48960 835 aa8.57□□□□□ -1.04
LMBR1-216ENST00000477983 HGSNATQ68CP4 663 aa8.57□□□□□ -1.04
LMBR1-216ENST00000477983 CLEC10AQ8IUN9 316 aa8.57□□□□□ -1.04
LMBR1-216ENST00000477983 SOX17Q9H6I2 414 aaPredicted RBP8.57□□□□□ -1.04
LMBR1-216ENST00000477983 EGFL7Q9UHF1 273 aa8.57□□□□□ -1.04
LMBR1-216ENST00000477983 NLRP12P59046 1061 aa8.56□□□□□ -1.04
LMBR1-216ENST00000477983 NFIAQ12857 509 aa8.56□□□□□ -1.04
LMBR1-216ENST00000477983 RNF43Q68DV7 783 aa8.56□□□□□ -1.04
LMBR1-216ENST00000477983 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.56□□□□□ -1.04
LMBR1-216ENST00000477983 FAM20CQ8IXL6 584 aa8.56□□□□□ -1.04
LMBR1-216ENST00000477983 SLC7A3Q8WY07 619 aa8.56□□□□□ -1.04
LMBR1-216ENST00000477983 FAM83CQ9BQN1 747 aa8.56□□□□□ -1.04
LMBR1-216ENST00000477983 C7orf69Q9H7B7 122 aa8.56□□□□□ -1.04
LMBR1-216ENST00000477983 AMOTL2Q9Y2J4 779 aa8.56□□□□□ -1.04
LMBR1-216ENST00000477983 ICMTO60725 284 aa8.55□□□□□ -1.04
LMBR1-216ENST00000477983 ABL1P00519 1130 aa8.55□□□□□ -1.04
LMBR1-216ENST00000477983 IKBKEQ14164 716 aa8.55□□□□□ -1.04
LMBR1-216ENST00000477983 ECM1Q16610 540 aa8.55□□□□□ -1.04
LMBR1-216ENST00000477983 ZDHHC13Q8IUH4 622 aa8.55□□□□□ -1.04
LMBR1-216ENST00000477983 TRIM42Q8IWZ5 723 aa8.55□□□□□ -1.04
LMBR1-216ENST00000477983 RUSC1Q9BVN2 902 aa8.55□□□□□ -1.04
LMBR1-216ENST00000477983 ANO2Q9NQ90 1003 aa8.55□□□□□ -1.04
LMBR1-216ENST00000477983 HIF3AQ9Y2N7 669 aa8.55□□□□□ -1.04
LMBR1-216ENST00000477983 HMX2A2RU54 273 aa8.54□□□□□ -1.04
LMBR1-216ENST00000477983 PREPP48147 710 aa8.54□□□□□ -1.04
LMBR1-216ENST00000477983 ZNF211Q13398 564 aaPredicted RBP8.54□□□□□ -1.04
LMBR1-216ENST00000477983 PCMTD2Q9NV79 361 aa8.54□□□□□ -1.04
LMBR1-216ENST00000477983 SART1O43290 800 aaKnown RBP8.53□□□□□ -1.04
LMBR1-216ENST00000477983 COBLO75128 1261 aa8.53□□□□□ -1.04
LMBR1-216ENST00000477983 ESRRAP11474 423 aaPredicted RBP8.53□□□□□ -1.04
LMBR1-216ENST00000477983 SSTR4P31391 388 aa8.53□□□□□ -1.04
LMBR1-216ENST00000477983 B4GALNT3Q6L9W6 998 aa8.53□□□□□ -1.04
LMBR1-216ENST00000477983 DBNDD2Q9BQY9 259 aa8.53□□□□□ -1.04
LMBR1-216ENST00000477983 TMPRSS13Q9BYE2 586 aa8.53□□□□□ -1.04
LMBR1-216ENST00000477983 LATS2Q9NRM7 1088 aa8.53□□□□□ -1.04
LMBR1-216ENST00000477983 KIAA1324LA8MWY0 1029 aaPredicted RBP8.52□□□□□ -1.05
LMBR1-216ENST00000477983 EIF4EBP3O60516 100 aaPredicted RBP8.52□□□□□ -1.05
LMBR1-216ENST00000477983 MED26O95402 600 aa8.52□□□□□ -1.05
LMBR1-216ENST00000477983 TGFB1P01137 390 aa8.52□□□□□ -1.05
LMBR1-216ENST00000477983 BMP3P12645 472 aa8.52□□□□□ -1.05
LMBR1-216ENST00000477983 GALNT12Q8IXK2 581 aa8.52□□□□□ -1.05
LMBR1-216ENST00000477983 SMG8Q8ND04 991 aaKnown RBP8.52□□□□□ -1.05
LMBR1-216ENST00000477983 SUGCTQ9HAC7 445 aa8.52□□□□□ -1.05
LMBR1-216ENST00000477983 PRR19A6NJB7 356 aa8.51□□□□□ -1.05
LMBR1-216ENST00000477983 FDX2Q6P4F2 183 aa8.51□□□□□ -1.05
LMBR1-216ENST00000477983 BEND4Q6ZU67 534 aa8.51□□□□□ -1.05
LMBR1-216ENST00000477983 ASAP3Q8TDY4 903 aa8.51□□□□□ -1.05
LMBR1-216ENST00000477983 LOC100289279A0A1B0GTE1 492 aa8.5□□□□□ -1.05
LMBR1-216ENST00000477983 EXOSC6Q5RKV6 272 aaKnown RBP8.5□□□□□ -1.05
LMBR1-216ENST00000477983 INTS5Q6P9B9 1019 aaKnown RBP8.5□□□□□ -1.05
LMBR1-216ENST00000477983 CCNJLQ8IV13 435 aa8.5□□□□□ -1.05
LMBR1-216ENST00000477983 A0A1W2PP55 124 aa8.49□□□□□ -1.05
LMBR1-216ENST00000477983 TIAF1O95411 115 aa8.49□□□□□ -1.05
LMBR1-216ENST00000477983 POLR3DP05423 398 aaPredicted RBP8.49□□□□□ -1.05
LMBR1-216ENST00000477983 NUTM2GQ5VZR2 741 aa8.49□□□□□ -1.05
LMBR1-216ENST00000477983 A0A096LPE4 126 aa8.48□□□□□ -1.05
LMBR1-216ENST00000477983 A0A1W2PPZ6 126 aa8.48□□□□□ -1.05
LMBR1-216ENST00000477983 METTL12A8MUP2 240 aa8.48□□□□□ -1.05
LMBR1-216ENST00000477983 DLGAP3O95886 979 aa8.48□□□□□ -1.05
LMBR1-216ENST00000477983 NEFLP07196 543 aa8.48□□□□□ -1.05
LMBR1-216ENST00000477983 ARHGAP4P98171 946 aa8.48□□□□□ -1.05
LMBR1-216ENST00000477983 TCF12Q99081 682 aa8.48□□□□□ -1.05
LMBR1-216ENST00000477983 NRSN2Q9GZP1 204 aa8.48□□□□□ -1.05
LMBR1-216ENST00000477983 KCNF1Q9H3M0 494 aa8.48□□□□□ -1.05
LMBR1-216ENST00000477983 CYP4F12Q9HCS2 524 aa8.48□□□□□ -1.05
LMBR1-216ENST00000477983 BRPF3Q9ULD4 1205 aa8.48□□□□□ -1.05
LMBR1-216ENST00000477983 SERPINB4P48594 390 aa8.47□□□□□ -1.05
LMBR1-216ENST00000477983 KIAA0319Q5VV43 1072 aa8.47□□□□□ -1.05
LMBR1-216ENST00000477983 C12orf50Q8NA57 414 aaPredicted RBP8.47□□□□□ -1.05
LMBR1-216ENST00000477983 CITED4Q96RK1 184 aa8.47□□□□□ -1.05
LMBR1-216ENST00000477983 SPINK2P20155 84 aa8.46□□□□□ -1.06
LMBR1-216ENST00000477983 MAP4P27816 1152 aaKnown RBP8.46□□□□□ -1.06
LMBR1-216ENST00000477983 GRIK1P39086 918 aa8.46□□□□□ -1.06
LMBR1-216ENST00000477983 GRIA4P48058 902 aa8.46□□□□□ -1.06
LMBR1-216ENST00000477983 ZNF423Q2M1K9 1284 aa8.46□□□□□ -1.06
LMBR1-216ENST00000477983 TXNDC2Q86VQ3 553 aa8.46□□□□□ -1.06
LMBR1-216ENST00000477983 GLYCTKQ8IVS8 523 aa8.46□□□□□ -1.06
LMBR1-216ENST00000477983 SHKBP1Q8TBC3 707 aa8.46□□□□□ -1.06
LMBR1-216ENST00000477983 FAM129BQ96TA1 746 aa8.46□□□□□ -1.06
LMBR1-216ENST00000477983 USP26Q9BXU7 913 aa8.46□□□□□ -1.06
LMBR1-216ENST00000477983 CLEC4MQ9H2X3 399 aaPredicted RBP8.46□□□□□ -1.06
LMBR1-216ENST00000477983 H3BRB1 525 aa8.45□□□□□ -1.06
LMBR1-216ENST00000477983 GAS2O43903 313 aaKnown RBP8.45□□□□□ -1.06
LMBR1-216ENST00000477983 GSTM4Q03013 218 aa8.45□□□□□ -1.06
LMBR1-216ENST00000477983 SGO2Q562F6 1265 aa8.45□□□□□ -1.06
LMBR1-216ENST00000477983 DTX1Q86Y01 620 aa8.45□□□□□ -1.06
LMBR1-216ENST00000477983 KRTAP9-9Q9BYP9 154 aa8.45□□□□□ -1.06
LMBR1-216ENST00000477983 KRTAP9-4Q9BYQ2 154 aa8.45□□□□□ -1.06
LMBR1-216ENST00000477983 TUT1Q9H6E5 874 aaKnown RBP8.45□□□□□ -1.06
LMBR1-216ENST00000477983 LIN7BQ9HAP6 207 aa8.45□□□□□ -1.06
LMBR1-216ENST00000477983 PCDH1Q08174 1060 aa8.44□□□□□ -1.06
LMBR1-216ENST00000477983 PDE3BQ13370 1112 aa8.44□□□□□ -1.06
LMBR1-216ENST00000477983 SPRED3Q2MJR0 410 aa8.44□□□□□ -1.06
LMBR1-216ENST00000477983 USPL1Q5W0Q7 1092 aa8.44□□□□□ -1.06
LMBR1-216ENST00000477983 ERICH6Q7L0X2 663 aa8.44□□□□□ -1.06
LMBR1-216ENST00000477983 NDUFB5O43674 189 aa8.43□□□□□ -1.06
LMBR1-216ENST00000477983 IGHA2P01877 340 aa8.43□□□□□ -1.06
LMBR1-216ENST00000477983 SOX4Q06945 474 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms