RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 NLRP13Q86W25 1043 aa5.91□□□□□ -1.46
VPS13D-206ENST00000476045 LARGE2Q8N3Y3 721 aa5.91□□□□□ -1.46
VPS13D-206ENST00000476045 ZDHHC1Q8WTX9 485 aa5.91□□□□□ -1.46
VPS13D-206ENST00000476045 ACDQ96AP0 544 aa5.91□□□□□ -1.46
VPS13D-206ENST00000476045 RUBCNLQ9H714 662 aa5.91□□□□□ -1.46
VPS13D-206ENST00000476045 PHF24Q9UPV7 400 aa5.91□□□□□ -1.46
VPS13D-206ENST00000476045 THRAP3Q9Y2W1 955 aaKnown RBP5.91□□□□□ -1.46
VPS13D-206ENST00000476045 MAFBQ9Y5Q3 323 aaPredicted RBP5.91□□□□□ -1.46
VPS13D-206ENST00000476045 BCL9O00512 1426 aa5.91□□□□□ -1.46
VPS13D-206ENST00000476045 EDC4Q6P2E9 1401 aaKnown RBP5.91□□□□□ -1.46
VPS13D-206ENST00000476045 MX2P20592 715 aa5.9□□□□□ -1.46
VPS13D-206ENST00000476045 NBPF8Q3BBV2 869 aa5.9□□□□□ -1.46
VPS13D-206ENST00000476045 FAM182BQ5T319 152 aa5.9□□□□□ -1.46
VPS13D-206ENST00000476045 FIGNL1Q6PIW4 674 aa5.9□□□□□ -1.46
VPS13D-206ENST00000476045 DEPDC4Q8N2C3 294 aa5.9□□□□□ -1.46
VPS13D-206ENST00000476045 ABTB2Q8N961 1025 aa5.9□□□□□ -1.46
VPS13D-206ENST00000476045 C7orf43Q8WVR3 580 aa5.9□□□□□ -1.46
VPS13D-206ENST00000476045 YTHDC1Q96MU7 727 aaKnown RBP5.9□□□□□ -1.46
VPS13D-206ENST00000476045 SERTAD1Q9UHV2 236 aa5.9□□□□□ -1.46
VPS13D-206ENST00000476045 HCN2Q9UL51 889 aa5.9□□□□□ -1.46
VPS13D-206ENST00000476045 TNS2Q63HR2 1409 aa5.9□□□□□ -1.47
VPS13D-206ENST00000476045 QSER1Q2KHR3 1735 aa5.89□□□□□ -1.47
VPS13D-206ENST00000476045 EML1O00423 815 aa5.89□□□□□ -1.47
VPS13D-206ENST00000476045 FAM157BP0CG42 384 aa5.89□□□□□ -1.47
VPS13D-206ENST00000476045 CSB-PGBD3P0DP91 1061 aa5.89□□□□□ -1.47
VPS13D-206ENST00000476045 BCRP11274 1271 aa5.89□□□□□ -1.47
VPS13D-206ENST00000476045 NBPF1Q3BBV0 1214 aa5.89□□□□□ -1.47
VPS13D-206ENST00000476045 FAM196AQ6ZSG2 479 aa5.89□□□□□ -1.47
VPS13D-206ENST00000476045 PGBD3Q8N328 593 aa5.89□□□□□ -1.47
VPS13D-206ENST00000476045 TCP11L2Q8N4U5 519 aa5.89□□□□□ -1.47
VPS13D-206ENST00000476045 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.89□□□□□ -1.47
VPS13D-206ENST00000476045 KCNH5Q8NCM2 988 aa5.89□□□□□ -1.47
VPS13D-206ENST00000476045 L3MBTL2Q969R5 705 aa5.89□□□□□ -1.47
VPS13D-206ENST00000476045 NSFL1CQ9UNZ2 370 aaKnown RBP5.89□□□□□ -1.47
VPS13D-206ENST00000476045 CCDC7Q96M83 1385 aa5.89□□□□□ -1.47
VPS13D-206ENST00000476045 MYOM1P52179 1685 aa5.88□□□□□ -1.47
VPS13D-206ENST00000476045 ANKRD26Q9UPS8 1709 aa5.88□□□□□ -1.47
VPS13D-206ENST00000476045 PALM3A6NDB9 673 aaPredicted RBP5.88□□□□□ -1.47
VPS13D-206ENST00000476045 EFSO43281 561 aa5.88□□□□□ -1.47
VPS13D-206ENST00000476045 OIP5O43482 229 aa5.88□□□□□ -1.47
VPS13D-206ENST00000476045 BNIP3LO60238 219 aa5.88□□□□□ -1.47
VPS13D-206ENST00000476045 SLCO4C1Q6ZQN7 724 aa5.88□□□□□ -1.47
VPS13D-206ENST00000476045 SLC9A9Q8IVB4 645 aa5.88□□□□□ -1.47
VPS13D-206ENST00000476045 STAG2Q8N3U4 1231 aa5.88□□□□□ -1.47
VPS13D-206ENST00000476045 OGFOD1Q8N543 542 aa5.88□□□□□ -1.47
VPS13D-206ENST00000476045 TPCN2Q8NHX9 752 aa5.88□□□□□ -1.47
VPS13D-206ENST00000476045 PUS7Q96PZ0 661 aaKnown RBP5.88□□□□□ -1.47
VPS13D-206ENST00000476045 ZIC5Q96T25 663 aa5.88□□□□□ -1.47
VPS13D-206ENST00000476045 PCDHGC4Q9Y5F7 938 aa5.88□□□□□ -1.47
VPS13D-206ENST00000476045 WDR17Q8IZU2 1322 aa5.88□□□□□ -1.47
VPS13D-206ENST00000476045 USP31Q70CQ4 1352 aa5.88□□□□□ -1.47
VPS13D-206ENST00000476045 KTN1Q86UP2 1357 aaKnown RBP5.88□□□□□ -1.47
VPS13D-206ENST00000476045 CASZ1Q86V15 1759 aa5.88□□□□□ -1.47
VPS13D-206ENST00000476045 C2CD2LO14523 706 aa5.87□□□□□ -1.47
VPS13D-206ENST00000476045 GCP02774 474 aa5.87□□□□□ -1.47
VPS13D-206ENST00000476045 FGFR3P22607 806 aa5.87□□□□□ -1.47
VPS13D-206ENST00000476045 MAP3K10Q02779 954 aa5.87□□□□□ -1.47
VPS13D-206ENST00000476045 CCDC102BQ68D86 513 aa5.87□□□□□ -1.47
VPS13D-206ENST00000476045 KLRG1Q96E93 195 aa5.87□□□□□ -1.47
VPS13D-206ENST00000476045 ABHD17AQ96GS6 310 aa5.87□□□□□ -1.47
VPS13D-206ENST00000476045 OXCT2Q9BYC2 517 aaPredicted RBP5.87□□□□□ -1.47
VPS13D-206ENST00000476045 PPP1R12CQ9BZL4 782 aa5.87□□□□□ -1.47
VPS13D-206ENST00000476045 ZCCHC2Q9C0B9 1178 aaKnown RBP5.87□□□□□ -1.47
VPS13D-206ENST00000476045 AVENQ9NQS1 362 aaPredicted RBP5.87□□□□□ -1.47
VPS13D-206ENST00000476045 MKRN1Q9UHC7 482 aaKnown RBP5.87□□□□□ -1.47
VPS13D-206ENST00000476045 GDF2Q9UK05 429 aaPredicted RBP5.87□□□□□ -1.47
VPS13D-206ENST00000476045 RTL1A6NKG5 1358 aa5.87□□□□□ -1.47
VPS13D-206ENST00000476045 CD163L1Q9NR16 1453 aa5.87□□□□□ -1.47
VPS13D-206ENST00000476045 KAT6BQ8WYB5 2073 aa5.87□□□□□ -1.47
VPS13D-206ENST00000476045 BTAF1O14981 1849 aa5.86□□□□□ -1.47
VPS13D-206ENST00000476045 TTC21BQ7Z4L5 1316 aa5.86□□□□□ -1.47
VPS13D-206ENST00000476045 CLSPNQ9HAW4 1339 aa5.86□□□□□ -1.47
VPS13D-206ENST00000476045 A0A1W2PNR3 127 aa5.86□□□□□ -1.47
VPS13D-206ENST00000476045 HOXB4P17483 251 aaPredicted RBP5.86□□□□□ -1.47
VPS13D-206ENST00000476045 TATP17735 454 aaPredicted RBP5.86□□□□□ -1.47
VPS13D-206ENST00000476045 EVA1CP58658 441 aa5.86□□□□□ -1.47
VPS13D-206ENST00000476045 ZC3H6P61129 1189 aaKnown RBP5.86□□□□□ -1.47
VPS13D-206ENST00000476045 TNP2Q05952 138 aa5.86□□□□□ -1.47
VPS13D-206ENST00000476045 PDE3BQ13370 1112 aa5.86□□□□□ -1.47
VPS13D-206ENST00000476045 LAMC2Q13753 1193 aa5.86□□□□□ -1.47
VPS13D-206ENST00000476045 CHRNA2Q15822 529 aa5.86□□□□□ -1.47
VPS13D-206ENST00000476045 C1orf53Q5VUE5 145 aa5.86□□□□□ -1.47
VPS13D-206ENST00000476045 KANK3Q6NY19 840 aa5.86□□□□□ -1.47
VPS13D-206ENST00000476045 STRN4Q9NRL3 753 aa5.86□□□□□ -1.47
VPS13D-206ENST00000476045 ENAMQ9NRM1 1142 aa5.86□□□□□ -1.47
VPS13D-206ENST00000476045 DOT1LQ8TEK3 1739 aa5.85□□□□□ -1.47
VPS13D-206ENST00000476045 SHANK3Q9BYB0 1731 aa5.85□□□□□ -1.47
VPS13D-206ENST00000476045 PAPPAQ13219 1627 aa5.85□□□□□ -1.47
VPS13D-206ENST00000476045 A0A1W2PP64 1363 aa5.85□□□□□ -1.47
VPS13D-206ENST00000476045 FAM196BA6NMK8 535 aa5.85□□□□□ -1.47
VPS13D-206ENST00000476045 C21orf2O43822 256 aa5.85□□□□□ -1.47
VPS13D-206ENST00000476045 ARAFP10398 606 aa5.85□□□□□ -1.47
VPS13D-206ENST00000476045 NOS2P35228 1153 aa5.85□□□□□ -1.47
VPS13D-206ENST00000476045 TXLNAP40222 546 aa5.85□□□□□ -1.47
VPS13D-206ENST00000476045 PSMA6P60900 246 aaKnown RBP5.85□□□□□ -1.47
VPS13D-206ENST00000476045 RASSF7Q02833 373 aa5.85□□□□□ -1.47
VPS13D-206ENST00000476045 HDGFL2Q7Z4V5 671 aaPredicted RBP5.85□□□□□ -1.47
VPS13D-206ENST00000476045 DEFB132Q7Z7B7 95 aa5.85□□□□□ -1.47
VPS13D-206ENST00000476045 TNS4Q8IZW8 715 aa5.85□□□□□ -1.47
VPS13D-206ENST00000476045 GOLGA6L1Q8N7Z2 621 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms