RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 LARP1Q6PKG0 1096 aaKnown RBP8.02□□□□□ -1.13
PTCD3-207ENST00000467273 TRIM11Q96F44 468 aa8.02□□□□□ -1.13
PTCD3-207ENST00000467273 CDCA7Q9BWT1 371 aaPredicted RBP8.02□□□□□ -1.13
PTCD3-207ENST00000467273 PLVAPQ9BX97 442 aa8.02□□□□□ -1.13
PTCD3-207ENST00000467273 ZCCHC2Q9C0B9 1178 aaKnown RBP8.02□□□□□ -1.13
PTCD3-207ENST00000467273 PCDHGC4Q9Y5F7 938 aa8.02□□□□□ -1.13
PTCD3-207ENST00000467273 SHANK3Q9BYB0 1731 aa8.02□□□□□ -1.13
PTCD3-207ENST00000467273 POLR3AO14802 1390 aaPredicted RBP8.01□□□□□ -1.13
PTCD3-207ENST00000467273 STAU1O95793 577 aaKnown RBP8.01□□□□□ -1.13
PTCD3-207ENST00000467273 SPATA31C1P0DKV0 1188 aa8.01□□□□□ -1.13
PTCD3-207ENST00000467273 CD33P20138 364 aa8.01□□□□□ -1.13
PTCD3-207ENST00000467273 ZC3H6P61129 1189 aaKnown RBP8.01□□□□□ -1.13
PTCD3-207ENST00000467273 SAFB2Q14151 953 aaKnown RBP eCLIP8.01□□□□□ -1.13
PTCD3-207ENST00000467273 DDB1Q16531 1140 aa8.01□□□□□ -1.13
PTCD3-207ENST00000467273 FOXD4L6Q3SYB3 417 aaPredicted RBP8.01□□□□□ -1.13
PTCD3-207ENST00000467273 FOXD4L3Q6VB84 417 aaPredicted RBP8.01□□□□□ -1.13
PTCD3-207ENST00000467273 FCHSD1Q86WN1 690 aa8.01□□□□□ -1.13
PTCD3-207ENST00000467273 PDGFDQ9GZP0 370 aaPredicted RBP8.01□□□□□ -1.13
PTCD3-207ENST00000467273 AKAP12Q02952 1782 aa8.01□□□□□ -1.13
PTCD3-207ENST00000467273 ADGRB1O14514 1584 aa8.01□□□□□ -1.13
PTCD3-207ENST00000467273 USP19O94966 1318 aa8.01□□□□□ -1.13
PTCD3-207ENST00000467273 BRD4O60885 1362 aaPredicted RBP8□□□□□ -1.13
PTCD3-207ENST00000467273 ATXN7O15265 892 aaPredicted RBP8□□□□□ -1.13
PTCD3-207ENST00000467273 GPR162Q16538 588 aa8□□□□□ -1.13
PTCD3-207ENST00000467273 TXNRD1Q16881 649 aa8□□□□□ -1.13
PTCD3-207ENST00000467273 RSPO4Q2I0M5 234 aaPredicted RBP8□□□□□ -1.13
PTCD3-207ENST00000467273 CFAP70Q5T0N1 1121 aa8□□□□□ -1.13
PTCD3-207ENST00000467273 LCE3BQ5TA77 95 aa8□□□□□ -1.13
PTCD3-207ENST00000467273 CCDC85AQ96PX6 553 aaPredicted RBP8□□□□□ -1.13
PTCD3-207ENST00000467273 DNAAF2Q9NVR5 837 aaKnown RBP8□□□□□ -1.13
PTCD3-207ENST00000467273 WNK3Q9BYP7 1800 aa7.99□□□□□ -1.13
PTCD3-207ENST00000467273 GRIN3BO60391 1043 aa7.99□□□□□ -1.13
PTCD3-207ENST00000467273 COL24A1Q17RW2 1714 aa7.99□□□□□ -1.13
PTCD3-207ENST00000467273 PPARGC1BQ86YN6 1023 aaKnown RBP7.99□□□□□ -1.13
PTCD3-207ENST00000467273 CCDC82Q8N4S0 544 aa7.99□□□□□ -1.13
PTCD3-207ENST00000467273 AIDAQ96BJ3 306 aa7.99□□□□□ -1.13
PTCD3-207ENST00000467273 GDPD2Q9HCC8 539 aa7.99□□□□□ -1.13
PTCD3-207ENST00000467273 PAPPAQ13219 1627 aa7.99□□□□□ -1.13
PTCD3-207ENST00000467273 QSER1Q2KHR3 1735 aa7.98□□□□□ -1.13
PTCD3-207ENST00000467273 KHNYNO15037 678 aaKnown RBP7.98□□□□□ -1.13
PTCD3-207ENST00000467273 HSPA6P17066 643 aa7.98□□□□□ -1.13
PTCD3-207ENST00000467273 PCBP4P57723 403 aaKnown RBP7.98□□□□□ -1.13
PTCD3-207ENST00000467273 ETNK1Q9HBU6 452 aa7.98□□□□□ -1.13
PTCD3-207ENST00000467273 ZFP64Q9NPA5 681 aa7.98□□□□□ -1.13
PTCD3-207ENST00000467273 TPSG1Q9NRR2 321 aa7.98□□□□□ -1.13
PTCD3-207ENST00000467273 KLF15Q9UIH9 416 aa7.98□□□□□ -1.13
PTCD3-207ENST00000467273 TOPAZ1Q8N9V7 1692 aa7.98□□□□□ -1.13
PTCD3-207ENST00000467273 GCP02774 474 aa7.97□□□□□ -1.13
PTCD3-207ENST00000467273 MAPTP10636 758 aaKnown RBP7.97□□□□□ -1.13
PTCD3-207ENST00000467273 ATP4AP20648 1035 aa7.97□□□□□ -1.13
PTCD3-207ENST00000467273 ARSJQ5FYB0 599 aaPredicted RBP7.97□□□□□ -1.13
PTCD3-207ENST00000467273 NBPF11Q86T75 865 aa7.97□□□□□ -1.13
PTCD3-207ENST00000467273 NLRP13Q86W25 1043 aa7.97□□□□□ -1.13
PTCD3-207ENST00000467273 NUDT16Q96DE0 195 aaKnown RBP7.97□□□□□ -1.13
PTCD3-207ENST00000467273 HIRIP3Q9BW71 556 aaPredicted RBP7.97□□□□□ -1.13
PTCD3-207ENST00000467273 NHSQ6T4R5 1651 aa7.96□□□□□ -1.13
PTCD3-207ENST00000467273 ABL2P42684 1182 aa7.96□□□□□ -1.14
PTCD3-207ENST00000467273 PRRT3Q5FWE3 981 aa7.96□□□□□ -1.14
PTCD3-207ENST00000467273 NKAPLQ5M9Q1 402 aa7.96□□□□□ -1.14
PTCD3-207ENST00000467273 NLRP8Q86W28 1048 aa7.96□□□□□ -1.14
PTCD3-207ENST00000467273 ABTB2Q8N961 1025 aa7.96□□□□□ -1.14
PTCD3-207ENST00000467273 PRR12Q9ULL5 1215 aa7.96□□□□□ -1.14
PTCD3-207ENST00000467273 TBC1D2BQ9UPU7 963 aa7.96□□□□□ -1.14
PTCD3-207ENST00000467273 ACEP12821 1306 aa7.96□□□□□ -1.14
PTCD3-207ENST00000467273 SPDYE3A6NKU9 549 aa7.95□□□□□ -1.14
PTCD3-207ENST00000467273 DYRK3O43781 588 aa7.95□□□□□ -1.14
PTCD3-207ENST00000467273 POLD1P28340 1107 aa7.95□□□□□ -1.14
PTCD3-207ENST00000467273 ARTNQ5T4W7 220 aa7.95□□□□□ -1.14
PTCD3-207ENST00000467273 MARCH10Q8NA82 808 aaPredicted RBP7.95□□□□□ -1.14
PTCD3-207ENST00000467273 AVENQ9NQS1 362 aaPredicted RBP7.95□□□□□ -1.14
PTCD3-207ENST00000467273 HCN2Q9UL51 889 aa7.95□□□□□ -1.14
PTCD3-207ENST00000467273 TRAK1Q9UPV9 953 aa7.95□□□□□ -1.14
PTCD3-207ENST00000467273 WDR17Q8IZU2 1322 aa7.95□□□□□ -1.14
PTCD3-207ENST00000467273 ARHGEF28Q8N1W1 1705 aaKnown RBP7.95□□□□□ -1.14
PTCD3-207ENST00000467273 A0A1W2PNR3 127 aa7.94□□□□□ -1.14
PTCD3-207ENST00000467273 TNP2Q05952 138 aa7.94□□□□□ -1.14
PTCD3-207ENST00000467273 NUTM2GQ5VZR2 741 aa7.94□□□□□ -1.14
PTCD3-207ENST00000467273 TOM1L2Q6ZVM7 507 aa7.94□□□□□ -1.14
PTCD3-207ENST00000467273 PTF1AQ7RTS3 328 aa7.94□□□□□ -1.14
PTCD3-207ENST00000467273 C1orf216Q8TAB5 229 aa7.94□□□□□ -1.14
PTCD3-207ENST00000467273 MPHOSPH9Q99550 1183 aa7.94□□□□□ -1.14
PTCD3-207ENST00000467273 KRTAP4-12Q9BQ66 201 aa7.94□□□□□ -1.14
PTCD3-207ENST00000467273 CEP126Q9P2H0 1117 aa7.94□□□□□ -1.14
PTCD3-207ENST00000467273 DOLKQ9UPQ8 538 aa7.94□□□□□ -1.14
PTCD3-207ENST00000467273 TNS2Q63HR2 1409 aa7.94□□□□□ -1.14
PTCD3-207ENST00000467273 ATP10DQ9P241 1426 aa7.94□□□□□ -1.14
PTCD3-207ENST00000467273 SLIT3O75094 1523 aa7.93□□□□□ -1.14
PTCD3-207ENST00000467273 ABCC6O95255 1503 aa7.93□□□□□ -1.14
PTCD3-207ENST00000467273 TRPM1Q7Z4N2 1603 aa7.93□□□□□ -1.14
PTCD3-207ENST00000467273 COL18A1P39060 1754 aa7.93□□□□□ -1.14
PTCD3-207ENST00000467273 FAM229AH3BQW9 127 aa7.93□□□□□ -1.14
PTCD3-207ENST00000467273 ZNF468Q5VIY5 522 aaPredicted RBP7.93□□□□□ -1.14
PTCD3-207ENST00000467273 CARD10Q9BWT7 1032 aa7.93□□□□□ -1.14
PTCD3-207ENST00000467273 PRM3Q9NNZ6 103 aa7.93□□□□□ -1.14
PTCD3-207ENST00000467273 GJA3Q9Y6H8 435 aa7.93□□□□□ -1.14
PTCD3-207ENST00000467273 EXOC5O00471 708 aa7.92□□□□□ -1.14
PTCD3-207ENST00000467273 USP4Q13107 963 aa7.92□□□□□ -1.14
PTCD3-207ENST00000467273 NBPF1Q3BBV0 1214 aa7.92□□□□□ -1.14
PTCD3-207ENST00000467273 OXLD1Q5BKU9 147 aa7.92□□□□□ -1.14
PTCD3-207ENST00000467273 PRSS36Q5K4E3 855 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms