RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 PPP1R37O75864 691 aa11.46□□□□□ -0.57
APOBEC1-202ENST00000467171 TRIM37O94972 964 aa11.46□□□□□ -0.57
APOBEC1-202ENST00000467171 SLC34A2O95436 690 aa11.46□□□□□ -0.57
APOBEC1-202ENST00000467171 SLC5A1P13866 664 aa11.46□□□□□ -0.57
APOBEC1-202ENST00000467171 NEK4P51957 841 aa11.46□□□□□ -0.57
APOBEC1-202ENST00000467171 PTH1RQ03431 593 aa11.46□□□□□ -0.57
APOBEC1-202ENST00000467171 TSGA10IPQ3SY00 556 aa11.46□□□□□ -0.57
APOBEC1-202ENST00000467171 ZMYM1Q5SVZ6 1142 aa11.46□□□□□ -0.57
APOBEC1-202ENST00000467171 NBPF5PQ86XG9 351 aaPredicted RBP11.46□□□□□ -0.57
APOBEC1-202ENST00000467171 SLKQ9H2G2 1235 aaPredicted RBP11.46□□□□□ -0.57
APOBEC1-202ENST00000467171 BSDC1Q9NW68 430 aaPredicted RBP11.46□□□□□ -0.57
APOBEC1-202ENST00000467171 HMG20BQ9P0W2 317 aa11.46□□□□□ -0.57
APOBEC1-202ENST00000467171 SCN7AQ01118 1682 aa11.46□□□□□ -0.58
APOBEC1-202ENST00000467171 RNF113AO15541 343 aaKnown RBP11.45□□□□□ -0.58
APOBEC1-202ENST00000467171 ZKSCAN1P17029 563 aaPredicted RBP11.45□□□□□ -0.58
APOBEC1-202ENST00000467171 GTF2E1P29083 439 aaPredicted RBP11.45□□□□□ -0.58
APOBEC1-202ENST00000467171 ARID4AP29374 1257 aaPredicted RBP11.45□□□□□ -0.58
APOBEC1-202ENST00000467171 TTF1Q15361 905 aaPredicted RBP11.45□□□□□ -0.58
APOBEC1-202ENST00000467171 RNF20Q5VTR2 975 aa11.45□□□□□ -0.58
APOBEC1-202ENST00000467171 BICDL1Q6ZP65 573 aa11.45□□□□□ -0.58
APOBEC1-202ENST00000467171 ZNF589Q86UQ0 364 aaPredicted RBP11.45□□□□□ -0.58
APOBEC1-202ENST00000467171 ANKRD18AQ8IVF6 992 aa11.45□□□□□ -0.58
APOBEC1-202ENST00000467171 NLRP3Q96P20 1036 aa11.45□□□□□ -0.58
APOBEC1-202ENST00000467171 RBM8AQ9Y5S9 174 aaKnown RBP11.45□□□□□ -0.58
APOBEC1-202ENST00000467171 CARMIL3Q8ND23 1372 aa11.44□□□□□ -0.58
APOBEC1-202ENST00000467171 C4BP0C0L5 1744 aa11.44□□□□□ -0.58
APOBEC1-202ENST00000467171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.44□□□□□ -0.58
APOBEC1-202ENST00000467171 RXRBP28702 533 aa11.44□□□□□ -0.58
APOBEC1-202ENST00000467171 TXNRD1Q16881 649 aa11.44□□□□□ -0.58
APOBEC1-202ENST00000467171 CREB3L3Q68CJ9 461 aa11.44□□□□□ -0.58
APOBEC1-202ENST00000467171 CCDC102BQ68D86 513 aa11.44□□□□□ -0.58
APOBEC1-202ENST00000467171 SMIM5Q71RC9 77 aa11.44□□□□□ -0.58
APOBEC1-202ENST00000467171 KHSRPQ92945 711 aaKnown RBP eCLIP11.44□□□□□ -0.58
APOBEC1-202ENST00000467171 CWC22Q9HCG8 908 aaKnown RBP11.44□□□□□ -0.58
APOBEC1-202ENST00000467171 SLC27A2O14975 620 aa11.43□□□□□ -0.58
APOBEC1-202ENST00000467171 PSMA5P28066 241 aa11.43□□□□□ -0.58
APOBEC1-202ENST00000467171 MCAMP43121 646 aa11.43□□□□□ -0.58
APOBEC1-202ENST00000467171 ZAP70P43403 619 aa11.43□□□□□ -0.58
APOBEC1-202ENST00000467171 CHRNDQ07001 517 aa11.43□□□□□ -0.58
APOBEC1-202ENST00000467171 CUL4AQ13619 759 aa11.43□□□□□ -0.58
APOBEC1-202ENST00000467171 UBE4AQ14139 1066 aa11.43□□□□□ -0.58
APOBEC1-202ENST00000467171 KRT32Q14532 448 aa11.43□□□□□ -0.58
APOBEC1-202ENST00000467171 NFIXQ14938 502 aa11.43□□□□□ -0.58
APOBEC1-202ENST00000467171 NFKBIBQ15653 356 aa11.43□□□□□ -0.58
APOBEC1-202ENST00000467171 PRPF40BQ6NWY9 871 aaKnown RBP11.43□□□□□ -0.58
APOBEC1-202ENST00000467171 INTS4Q96HW7 963 aaKnown RBP11.43□□□□□ -0.58
APOBEC1-202ENST00000467171 TTC14Q96N46 770 aa11.43□□□□□ -0.58
APOBEC1-202ENST00000467171 DSCC1Q9BVC3 393 aa11.43□□□□□ -0.58
APOBEC1-202ENST00000467171 NDUFB9Q9Y6M9 179 aa11.43□□□□□ -0.58
APOBEC1-202ENST00000467171 SPEF2Q9C093 1822 aa11.43□□□□□ -0.58
APOBEC1-202ENST00000467171 SBF2Q86WG5 1849 aa11.42□□□□□ -0.58
APOBEC1-202ENST00000467171 HSP90AA1P07900 732 aaKnown RBP11.42□□□□□ -0.58
APOBEC1-202ENST00000467171 GYS1P13807 737 aa11.42□□□□□ -0.58
APOBEC1-202ENST00000467171 PHKA1P46020 1223 aa11.42□□□□□ -0.58
APOBEC1-202ENST00000467171 KCNJ4P48050 445 aa11.42□□□□□ -0.58
APOBEC1-202ENST00000467171 RPS8P62241 208 aaKnown RBP11.42□□□□□ -0.58
APOBEC1-202ENST00000467171 FKBP4Q02790 459 aaKnown RBP eCLIP11.42□□□□□ -0.58
APOBEC1-202ENST00000467171 SCARF1Q14162 830 aa11.42□□□□□ -0.58
APOBEC1-202ENST00000467171 VPS53Q5VIR6 699 aa11.42□□□□□ -0.58
APOBEC1-202ENST00000467171 ZSCAN25Q6NSZ9 544 aa11.42□□□□□ -0.58
APOBEC1-202ENST00000467171 APPBP2Q92624 585 aa11.42□□□□□ -0.58
APOBEC1-202ENST00000467171 TMX3Q96JJ7 454 aa11.42□□□□□ -0.58
APOBEC1-202ENST00000467171 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.42□□□□□ -0.58
APOBEC1-202ENST00000467171 ALDH8A1Q9H2A2 487 aaPredicted RBP11.42□□□□□ -0.58
APOBEC1-202ENST00000467171 LAMB2P55268 1798 aa11.41□□□□□ -0.58
APOBEC1-202ENST00000467171 PHF14O94880 888 aa11.41□□□□□ -0.58
APOBEC1-202ENST00000467171 TM4SF1P30408 202 aa11.41□□□□□ -0.58
APOBEC1-202ENST00000467171 UBE3CQ15386 1083 aa11.41□□□□□ -0.58
APOBEC1-202ENST00000467171 SPRYD3Q8NCJ5 442 aa11.41□□□□□ -0.58
APOBEC1-202ENST00000467171 HELBQ8NG08 1087 aaPredicted RBP11.41□□□□□ -0.58
APOBEC1-202ENST00000467171 UPF3BQ9BZI7 483 aaKnown RBP11.41□□□□□ -0.58
APOBEC1-202ENST00000467171 ANKRD2Q9GZV1 360 aa11.41□□□□□ -0.58
APOBEC1-202ENST00000467171 MINPP1Q9UNW1 487 aa11.41□□□□□ -0.58
APOBEC1-202ENST00000467171 RPAP1Q9BWH6 1393 aaPredicted RBP11.41□□□□□ -0.58
APOBEC1-202ENST00000467171 COL24A1Q17RW2 1714 aa11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 ZNF804BA4D1E1 1349 aa11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 CYP2E1P05181 493 aaPredicted RBP11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 NUDT7P0C024 238 aa11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 ADD2P35612 726 aa11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 NUCB2P80303 420 aa11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 RAB3GAP1Q15042 981 aa11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 RUFY3Q7L099 469 aa11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 CNBD1Q8NA66 436 aa11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 SPATA5Q8NB90 893 aa11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 FLAD1Q8NFF5 587 aa11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 CELF1Q92879 486 aaKnown RBP11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 OSBP2Q969R2 916 aa11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 JAKMIP1Q96N16 626 aaKnown RBP11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 SEC62Q99442 399 aaKnown RBP11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 PCDHGA4Q9Y5G9 962 aa11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 CYP46A1Q9Y6A2 500 aa11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 DDX60Q8IY21 1712 aaKnown RBP11.4□□□□□ -0.58
APOBEC1-202ENST00000467171 MAST3O60307 1309 aa11.39□□□□□ -0.59
APOBEC1-202ENST00000467171 SEMA3EO15041 775 aa11.39□□□□□ -0.59
APOBEC1-202ENST00000467171 IGSF3O75054 1194 aa11.39□□□□□ -0.59
APOBEC1-202ENST00000467171 CHGBP05060 677 aa11.39□□□□□ -0.59
APOBEC1-202ENST00000467171 CASTP20810 708 aaKnown RBP11.39□□□□□ -0.59
APOBEC1-202ENST00000467171 RASGRF1Q13972 1273 aa11.39□□□□□ -0.59
APOBEC1-202ENST00000467171 CRY2Q49AN0 593 aa11.39□□□□□ -0.59
APOBEC1-202ENST00000467171 PRR5LQ6MZQ0 368 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms