RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 ARHGAP4P98171 946 aa6.27□□□□□ -1.41
GTF3C3-209ENST00000466862 SLC51AQ86UW1 340 aa6.27□□□□□ -1.41
GTF3C3-209ENST00000466862 BSNDQ8WZ55 320 aa6.27□□□□□ -1.41
GTF3C3-209ENST00000466862 UTP4Q969X6 686 aaKnown RBP6.27□□□□□ -1.41
GTF3C3-209ENST00000466862 SOX17Q9H6I2 414 aaPredicted RBP6.27□□□□□ -1.41
GTF3C3-209ENST00000466862 AMOTL2Q9Y2J4 779 aa6.27□□□□□ -1.41
GTF3C3-209ENST00000466862 KIAA1324LA8MWY0 1029 aaPredicted RBP6.26□□□□□ -1.41
GTF3C3-209ENST00000466862 ABL1P00519 1130 aa6.26□□□□□ -1.41
GTF3C3-209ENST00000466862 IGLV1-40P01703 118 aa6.26□□□□□ -1.41
GTF3C3-209ENST00000466862 IGHA2P01877 340 aa6.26□□□□□ -1.41
GTF3C3-209ENST00000466862 ZDHHC13Q8IUH4 622 aa6.26□□□□□ -1.41
GTF3C3-209ENST00000466862 C7orf69Q9H7B7 122 aa6.26□□□□□ -1.41
GTF3C3-209ENST00000466862 ZFYVE28Q9HCC9 887 aa6.26□□□□□ -1.41
GTF3C3-209ENST00000466862 LOC100289279A0A1B0GTE1 492 aa6.25□□□□□ -1.41
GTF3C3-209ENST00000466862 METTL12A8MUP2 240 aa6.25□□□□□ -1.41
GTF3C3-209ENST00000466862 H3BRB1 525 aa6.25□□□□□ -1.41
GTF3C3-209ENST00000466862 SOX1O00570 391 aaPredicted RBP6.25□□□□□ -1.41
GTF3C3-209ENST00000466862 DHX15O43143 795 aaKnown RBP6.25□□□□□ -1.41
GTF3C3-209ENST00000466862 C19orf57Q0VDD7 668 aa6.25□□□□□ -1.41
GTF3C3-209ENST00000466862 ANKRD34AQ69YU3 496 aa6.25□□□□□ -1.41
GTF3C3-209ENST00000466862 FAM129BQ96TA1 746 aa6.25□□□□□ -1.41
GTF3C3-209ENST00000466862 TMPRSS13Q9BYE2 586 aa6.25□□□□□ -1.41
GTF3C3-209ENST00000466862 RNF208Q9H0X6 261 aa6.25□□□□□ -1.41
GTF3C3-209ENST00000466862 TUT1Q9H6E5 874 aaKnown RBP6.25□□□□□ -1.41
GTF3C3-209ENST00000466862 MEGF11A6BM72 1044 aa6.24□□□□□ -1.41
GTF3C3-209ENST00000466862 GSC2O15499 205 aa6.24□□□□□ -1.41
GTF3C3-209ENST00000466862 TIAF1O95411 115 aa6.24□□□□□ -1.41
GTF3C3-209ENST00000466862 DLGAP3O95886 979 aa6.24□□□□□ -1.41
GTF3C3-209ENST00000466862 TGFB1P01137 390 aa6.24□□□□□ -1.41
GTF3C3-209ENST00000466862 ESRRAP11474 423 aaPredicted RBP6.24□□□□□ -1.41
GTF3C3-209ENST00000466862 NFIAQ12857 509 aa6.24□□□□□ -1.41
GTF3C3-209ENST00000466862 TXNDC2Q86VQ3 553 aa6.24□□□□□ -1.41
GTF3C3-209ENST00000466862 GALNT12Q8IXK2 581 aa6.24□□□□□ -1.41
GTF3C3-209ENST00000466862 FAM20CQ8IXL6 584 aa6.24□□□□□ -1.41
GTF3C3-209ENST00000466862 SLC7A3Q8WY07 619 aa6.24□□□□□ -1.41
GTF3C3-209ENST00000466862 TCF12Q99081 682 aa6.24□□□□□ -1.41
GTF3C3-209ENST00000466862 RUSC1Q9BVN2 902 aa6.24□□□□□ -1.41
GTF3C3-209ENST00000466862 A0A1W2PP55 124 aa6.23□□□□□ -1.41
GTF3C3-209ENST00000466862 FAM177BA6PVY3 158 aa6.23□□□□□ -1.41
GTF3C3-209ENST00000466862 MED26O95402 600 aa6.23□□□□□ -1.41
GTF3C3-209ENST00000466862 POLR3DP05423 398 aaPredicted RBP6.23□□□□□ -1.41
GTF3C3-209ENST00000466862 IKBKEQ14164 716 aa6.23□□□□□ -1.41
GTF3C3-209ENST00000466862 B4GALNT3Q6L9W6 998 aa6.23□□□□□ -1.41
GTF3C3-209ENST00000466862 CCNJLQ8IV13 435 aa6.23□□□□□ -1.41
GTF3C3-209ENST00000466862 TRIM42Q8IWZ5 723 aa6.23□□□□□ -1.41
GTF3C3-209ENST00000466862 TTC16Q8NEE8 873 aa6.23□□□□□ -1.41
GTF3C3-209ENST00000466862 SUGCTQ9HAC7 445 aa6.23□□□□□ -1.41
GTF3C3-209ENST00000466862 STOML1Q9UBI4 398 aa6.23□□□□□ -1.41
GTF3C3-209ENST00000466862 HIF3AQ9Y2N7 669 aa6.23□□□□□ -1.41
GTF3C3-209ENST00000466862 HMX2A2RU54 273 aa6.22□□□□□ -1.41
GTF3C3-209ENST00000466862 GPR182O15218 404 aa6.22□□□□□ -1.41
GTF3C3-209ENST00000466862 SPINK2P20155 84 aa6.22□□□□□ -1.41
GTF3C3-209ENST00000466862 AAMPQ13685 434 aa6.22□□□□□ -1.41
GTF3C3-209ENST00000466862 USPL1Q5W0Q7 1092 aa6.22□□□□□ -1.41
GTF3C3-209ENST00000466862 RNF43Q68DV7 783 aa6.22□□□□□ -1.41
GTF3C3-209ENST00000466862 RETREG2Q8NC44 543 aa6.22□□□□□ -1.41
GTF3C3-209ENST00000466862 DBNDD2Q9BQY9 259 aa6.22□□□□□ -1.41
GTF3C3-209ENST00000466862 PRR19A6NJB7 356 aa6.21□□□□□ -1.42
GTF3C3-209ENST00000466862 GRIA4P48058 902 aa6.21□□□□□ -1.42
GTF3C3-209ENST00000466862 GLYCTKQ8IVS8 523 aa6.21□□□□□ -1.42
GTF3C3-209ENST00000466862 SMG8Q8ND04 991 aaKnown RBP6.21□□□□□ -1.42
GTF3C3-209ENST00000466862 ASAP3Q8TDY4 903 aa6.21□□□□□ -1.42
GTF3C3-209ENST00000466862 FAM83CQ9BQN1 747 aa6.21□□□□□ -1.42
GTF3C3-209ENST00000466862 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
GTF3C3-209ENST00000466862 CTSBP07858 339 aa6.2□□□□□ -1.42
GTF3C3-209ENST00000466862 BMP3P12645 472 aa6.2□□□□□ -1.42
GTF3C3-209ENST00000466862 SSTR4P31391 388 aa6.2□□□□□ -1.42
GTF3C3-209ENST00000466862 ORC1Q13415 861 aa6.2□□□□□ -1.42
GTF3C3-209ENST00000466862 SGO2Q562F6 1265 aa6.2□□□□□ -1.42
GTF3C3-209ENST00000466862 FDX2Q6P4F2 183 aa6.2□□□□□ -1.42
GTF3C3-209ENST00000466862 CLEC10AQ8IUN9 316 aa6.2□□□□□ -1.42
GTF3C3-209ENST00000466862 A0A096LPE4 126 aa6.19□□□□□ -1.42
GTF3C3-209ENST00000466862 A0A1W2PPZ6 126 aa6.19□□□□□ -1.42
GTF3C3-209ENST00000466862 ARL4DP49703 201 aa6.19□□□□□ -1.42
GTF3C3-209ENST00000466862 PCDH1Q08174 1060 aa6.19□□□□□ -1.42
GTF3C3-209ENST00000466862 ZNF423Q2M1K9 1284 aa6.19□□□□□ -1.42
GTF3C3-209ENST00000466862 KIAA0319Q5VV43 1072 aa6.19□□□□□ -1.42
GTF3C3-209ENST00000466862 BEND4Q6ZU67 534 aa6.19□□□□□ -1.42
GTF3C3-209ENST00000466862 TRIM56Q9BRZ2 755 aaKnown RBP6.19□□□□□ -1.42
GTF3C3-209ENST00000466862 USP26Q9BXU7 913 aa6.19□□□□□ -1.42
GTF3C3-209ENST00000466862 LIN7BQ9HAP6 207 aa6.19□□□□□ -1.42
GTF3C3-209ENST00000466862 BRPF3Q9ULD4 1205 aa6.19□□□□□ -1.42
GTF3C3-209ENST00000466862 ADAMTS4O75173 837 aa6.18□□□□□ -1.42
GTF3C3-209ENST00000466862 ITPKAP23677 461 aa6.18□□□□□ -1.42
GTF3C3-209ENST00000466862 SPRED3Q2MJR0 410 aa6.18□□□□□ -1.42
GTF3C3-209ENST00000466862 C2CD4AQ8NCU7 369 aaPredicted RBP6.18□□□□□ -1.42
GTF3C3-209ENST00000466862 CLEC4MQ9H2X3 399 aaPredicted RBP6.18□□□□□ -1.42
GTF3C3-209ENST00000466862 ZNF576Q9H609 170 aa6.18□□□□□ -1.42
GTF3C3-209ENST00000466862 GOLGA2P5Q9HBQ8 144 aa6.18□□□□□ -1.42
GTF3C3-209ENST00000466862 ABCB6Q9NP58 842 aa6.18□□□□□ -1.42
GTF3C3-209ENST00000466862 NPHS2Q9NP85 383 aa6.18□□□□□ -1.42
GTF3C3-209ENST00000466862 PCMTD2Q9NV79 361 aa6.18□□□□□ -1.42
GTF3C3-209ENST00000466862 SART1O43290 800 aaKnown RBP6.17□□□□□ -1.42
GTF3C3-209ENST00000466862 NDUFB5O43674 189 aa6.17□□□□□ -1.42
GTF3C3-209ENST00000466862 COBLO75128 1261 aa6.17□□□□□ -1.42
GTF3C3-209ENST00000466862 B3GALT4O96024 378 aa6.17□□□□□ -1.42
GTF3C3-209ENST00000466862 MAP4P27816 1152 aaKnown RBP6.17□□□□□ -1.42
GTF3C3-209ENST00000466862 PRPF40BQ6NWY9 871 aaKnown RBP6.17□□□□□ -1.42
GTF3C3-209ENST00000466862 SHKBP1Q8TBC3 707 aa6.17□□□□□ -1.42
GTF3C3-209ENST00000466862 BTBD11A6QL63 1104 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms