RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 TBC1D8BQ0IIM8 1120 aa7.15□□□□□ -1.26
EXOSC3-204ENST00000465860 MPHOSPH9Q99550 1183 aa7.15□□□□□ -1.26
EXOSC3-204ENST00000465860 GSX2Q9BZM3 304 aa7.15□□□□□ -1.26
EXOSC3-204ENST00000465860 QTRT2Q9H974 415 aaKnown RBP7.15□□□□□ -1.26
EXOSC3-204ENST00000465860 KLK14Q9P0G3 267 aa7.15□□□□□ -1.26
EXOSC3-204ENST00000465860 EID1Q9Y6B2 187 aa7.15□□□□□ -1.26
EXOSC3-204ENST00000465860 ADAMTS13Q76LX8 1427 aa7.15□□□□□ -1.27
EXOSC3-204ENST00000465860 IQSEC2Q5JU85 1478 aa7.15□□□□□ -1.27
EXOSC3-204ENST00000465860 NWD1Q149M9 1564 aa7.15□□□□□ -1.27
EXOSC3-204ENST00000465860 IFT172Q9UG01 1749 aa7.15□□□□□ -1.27
EXOSC3-204ENST00000465860 FAM229AH3BQW9 127 aa7.14□□□□□ -1.27
EXOSC3-204ENST00000465860 NID1P14543 1247 aa7.14□□□□□ -1.27
EXOSC3-204ENST00000465860 UBE2OQ9C0C9 1292 aaKnown RBP7.14□□□□□ -1.27
EXOSC3-204ENST00000465860 IGFLR1Q9H665 355 aa7.14□□□□□ -1.27
EXOSC3-204ENST00000465860 PLEKHG1Q9ULL1 1385 aa7.14□□□□□ -1.27
EXOSC3-204ENST00000465860 PTPRUQ92729 1446 aa7.13□□□□□ -1.27
EXOSC3-204ENST00000465860 SPDYE3A6NKU9 549 aa7.13□□□□□ -1.27
EXOSC3-204ENST00000465860 FOXO3O43524 673 aa7.13□□□□□ -1.27
EXOSC3-204ENST00000465860 RFX1P22670 979 aa7.13□□□□□ -1.27
EXOSC3-204ENST00000465860 DGKZQ13574 1117 aa7.13□□□□□ -1.27
EXOSC3-204ENST00000465860 FAM200AQ8TCP9 573 aa7.13□□□□□ -1.27
EXOSC3-204ENST00000465860 SLC6A14Q9UN76 642 aa7.13□□□□□ -1.27
EXOSC3-204ENST00000465860 SETBP1Q9Y6X0 1596 aa7.12□□□□□ -1.27
EXOSC3-204ENST00000465860 NFKB1P19838 968 aa7.12□□□□□ -1.27
EXOSC3-204ENST00000465860 INPP5BP32019 993 aa7.12□□□□□ -1.27
EXOSC3-204ENST00000465860 IDH3AP50213 366 aa7.12□□□□□ -1.27
EXOSC3-204ENST00000465860 CCINQ13939 588 aa7.12□□□□□ -1.27
EXOSC3-204ENST00000465860 PRRT3Q5FWE3 981 aa7.12□□□□□ -1.27
EXOSC3-204ENST00000465860 EFCC1Q9HA90 598 aa7.12□□□□□ -1.27
EXOSC3-204ENST00000465860 DNAJB12Q9NXW2 375 aaKnown RBP7.12□□□□□ -1.27
EXOSC3-204ENST00000465860 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.12□□□□□ -1.27
EXOSC3-204ENST00000465860 XRN1Q8IZH2 1706 aaKnown RBP7.12□□□□□ -1.27
EXOSC3-204ENST00000465860 SPATA31E1Q6ZUB1 1445 aa7.11□□□□□ -1.27
EXOSC3-204ENST00000465860 UBAP1LF5GYI3 381 aa7.11□□□□□ -1.27
EXOSC3-204ENST00000465860 LILRB5O75023 590 aa7.11□□□□□ -1.27
EXOSC3-204ENST00000465860 PPP1R15AO75807 674 aaPredicted RBP7.11□□□□□ -1.27
EXOSC3-204ENST00000465860 GATA4P43694 442 aa7.11□□□□□ -1.27
EXOSC3-204ENST00000465860 DOC2BQ14184 412 aa7.11□□□□□ -1.27
EXOSC3-204ENST00000465860 ZNF326Q5BKZ1 582 aaKnown RBP7.11□□□□□ -1.27
EXOSC3-204ENST00000465860 MYO19Q96H55 970 aa7.11□□□□□ -1.27
EXOSC3-204ENST00000465860 PNMA5Q96PV4 448 aa7.11□□□□□ -1.27
EXOSC3-204ENST00000465860 NOVA2Q9UNW9 492 aaKnown RBP7.11□□□□□ -1.27
EXOSC3-204ENST00000465860 DIP2AQ14689 1571 aa7.11□□□□□ -1.27
EXOSC3-204ENST00000465860 METP08581 1390 aa7.1□□□□□ -1.27
EXOSC3-204ENST00000465860 TMEM94Q12767 1356 aa7.1□□□□□ -1.27
EXOSC3-204ENST00000465860 MICAL2O94851 1124 aa7.1□□□□□ -1.27
EXOSC3-204ENST00000465860 EPB42P16452 691 aa7.1□□□□□ -1.27
EXOSC3-204ENST00000465860 KCNA6P17658 529 aa7.1□□□□□ -1.27
EXOSC3-204ENST00000465860 TRIM28Q13263 835 aaKnown RBP7.1□□□□□ -1.27
EXOSC3-204ENST00000465860 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.1□□□□□ -1.27
EXOSC3-204ENST00000465860 NUDT8Q8WV74 236 aa7.1□□□□□ -1.27
EXOSC3-204ENST00000465860 VTI1AQ96AJ9 217 aa7.1□□□□□ -1.27
EXOSC3-204ENST00000465860 NAGPAQ9UK23 515 aa7.1□□□□□ -1.27
EXOSC3-204ENST00000465860 LRFN2Q9ULH4 789 aa7.1□□□□□ -1.27
EXOSC3-204ENST00000465860 ANKRD30BQ9BXX2 1392 aa7.09□□□□□ -1.27
EXOSC3-204ENST00000465860 ARSDP51689 593 aa7.09□□□□□ -1.27
EXOSC3-204ENST00000465860 PIP4K2BP78356 416 aa7.09□□□□□ -1.27
EXOSC3-204ENST00000465860 GRIK4Q16099 956 aa7.09□□□□□ -1.27
EXOSC3-204ENST00000465860 C11orf91Q3C1V1 193 aa7.09□□□□□ -1.27
EXOSC3-204ENST00000465860 RGL3Q3MIN7 710 aa7.09□□□□□ -1.27
EXOSC3-204ENST00000465860 TRAPPC3LQ5T215 181 aa7.09□□□□□ -1.27
EXOSC3-204ENST00000465860 PRIMPOLQ96LW4 560 aa7.09□□□□□ -1.27
EXOSC3-204ENST00000465860 JPH1Q9HDC5 661 aaPredicted RBP7.09□□□□□ -1.27
EXOSC3-204ENST00000465860 ZFATQ9P243 1243 aa7.09□□□□□ -1.27
EXOSC3-204ENST00000465860 ZMIZ1Q9ULJ6 1067 aa7.09□□□□□ -1.27
EXOSC3-204ENST00000465860 TBX22Q9Y458 520 aa7.09□□□□□ -1.27
EXOSC3-204ENST00000465860 ASXL1Q8IXJ9 1541 aa7.09□□□□□ -1.27
EXOSC3-204ENST00000465860 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.09□□□□□ -1.27
EXOSC3-204ENST00000465860 NKTRP30414 1462 aaKnown RBP7.09□□□□□ -1.27
EXOSC3-204ENST00000465860 CCDC144AA2RUR9 1427 aa7.09□□□□□ -1.28
EXOSC3-204ENST00000465860 ADGRF5Q8IZF2 1346 aa7.08□□□□□ -1.28
EXOSC3-204ENST00000465860 NALCNQ8IZF0 1738 aa7.08□□□□□ -1.28
EXOSC3-204ENST00000465860 APBA3O96018 575 aa7.08□□□□□ -1.28
EXOSC3-204ENST00000465860 ITGB7P26010 798 aa7.08□□□□□ -1.28
EXOSC3-204ENST00000465860 FKBP5Q13451 457 aaPredicted RBP7.08□□□□□ -1.28
EXOSC3-204ENST00000465860 PSAPL1Q6NUJ1 521 aa7.08□□□□□ -1.28
EXOSC3-204ENST00000465860 KRT25Q7Z3Z0 450 aa7.08□□□□□ -1.28
EXOSC3-204ENST00000465860 ACIN1Q9UKV3 1341 aaKnown RBP7.07□□□□□ -1.28
EXOSC3-204ENST00000465860 ROBO1Q9Y6N7 1651 aa7.07□□□□□ -1.28
EXOSC3-204ENST00000465860 OPLAHO14841 1288 aa7.07□□□□□ -1.28
EXOSC3-204ENST00000465860 TARSP26639 723 aaKnown RBP7.07□□□□□ -1.28
EXOSC3-204ENST00000465860 HSPA1LP34931 641 aa7.07□□□□□ -1.28
EXOSC3-204ENST00000465860 AFF1P51825 1210 aaKnown RBP7.07□□□□□ -1.28
EXOSC3-204ENST00000465860 SRPK2P78362 688 aaKnown RBP7.07□□□□□ -1.28
EXOSC3-204ENST00000465860 IFT43Q96FT9 208 aa7.07□□□□□ -1.28
EXOSC3-204ENST00000465860 AMOTL2Q9Y2J4 779 aa7.07□□□□□ -1.28
EXOSC3-204ENST00000465860 USP20Q9Y2K6 914 aa7.07□□□□□ -1.28
EXOSC3-204ENST00000465860 A0A0A0MRY4 1105 aa7.06□□□□□ -1.28
EXOSC3-204ENST00000465860 ZBTB42B2RXF5 422 aa7.06□□□□□ -1.28
EXOSC3-204ENST00000465860 PRMT3O60678 531 aa7.06□□□□□ -1.28
EXOSC3-204ENST00000465860 SASH3O75995 380 aa7.06□□□□□ -1.28
EXOSC3-204ENST00000465860 MAP3K6O95382 1288 aa7.06□□□□□ -1.28
EXOSC3-204ENST00000465860 SWI5Q1ZZU3 235 aa7.06□□□□□ -1.28
EXOSC3-204ENST00000465860 COX20Q5RI15 118 aa7.06□□□□□ -1.28
EXOSC3-204ENST00000465860 STK32AQ8WU08 396 aa7.06□□□□□ -1.28
EXOSC3-204ENST00000465860 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.06□□□□□ -1.28
EXOSC3-204ENST00000465860 RPGRIP1LQ68CZ1 1315 aa7.05□□□□□ -1.28
EXOSC3-204ENST00000465860 PIK3C2GO75747 1445 aa7.05□□□□□ -1.28
EXOSC3-204ENST00000465860 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.05□□□□□ -1.28
EXOSC3-204ENST00000465860 RGS9O75916 674 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms