RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 SOX1O00570 391 aaPredicted RBP10.37□□□□□ -0.75
SMC4-205ENST00000465563 VN1R5Q7Z5H4 357 aa10.37□□□□□ -0.75
SMC4-205ENST00000465563 ASAP3Q8TDY4 903 aa10.37□□□□□ -0.75
SMC4-205ENST00000465563 BHLHE41Q9C0J9 482 aaPredicted RBP10.37□□□□□ -0.75
SMC4-205ENST00000465563 C7orf69Q9H7B7 122 aa10.37□□□□□ -0.75
SMC4-205ENST00000465563 ZFYVE28Q9HCC9 887 aa10.37□□□□□ -0.75
SMC4-205ENST00000465563 SSTR4P31391 388 aa10.36□□□□□ -0.75
SMC4-205ENST00000465563 NFIAQ12857 509 aa10.36□□□□□ -0.75
SMC4-205ENST00000465563 HGSNATQ68CP4 663 aa10.36□□□□□ -0.75
SMC4-205ENST00000465563 FDX2Q6P4F2 183 aa10.36□□□□□ -0.75
SMC4-205ENST00000465563 TRIM42Q8IWZ5 723 aa10.36□□□□□ -0.75
SMC4-205ENST00000465563 FAM20CQ8IXL6 584 aa10.36□□□□□ -0.75
SMC4-205ENST00000465563 EGFL7Q9UHF1 273 aa10.36□□□□□ -0.75
SMC4-205ENST00000465563 HMX2A2RU54 273 aa10.35□□□□□ -0.75
SMC4-205ENST00000465563 PREPP48147 710 aa10.35□□□□□ -0.75
SMC4-205ENST00000465563 PEAR1Q5VY43 1037 aaPredicted RBP10.35□□□□□ -0.75
SMC4-205ENST00000465563 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.35□□□□□ -0.75
SMC4-205ENST00000465563 CLEC10AQ8IUN9 316 aa10.35□□□□□ -0.75
SMC4-205ENST00000465563 LATS2Q9NRM7 1088 aa10.35□□□□□ -0.75
SMC4-205ENST00000465563 MEGF11A6BM72 1044 aa10.34□□□□□ -0.75
SMC4-205ENST00000465563 ICMTO60725 284 aa10.34□□□□□ -0.75
SMC4-205ENST00000465563 BMP3P12645 472 aa10.34□□□□□ -0.75
SMC4-205ENST00000465563 CD97P48960 835 aa10.34□□□□□ -0.75
SMC4-205ENST00000465563 RNF43Q68DV7 783 aa10.34□□□□□ -0.75
SMC4-205ENST00000465563 FAM83CQ9BQN1 747 aa10.33□□□□□ -0.76
SMC4-205ENST00000465563 DBNDD2Q9BQY9 259 aa10.33□□□□□ -0.76
SMC4-205ENST00000465563 KCNF1Q9H3M0 494 aa10.33□□□□□ -0.76
SMC4-205ENST00000465563 SOX17Q9H6I2 414 aaPredicted RBP10.33□□□□□ -0.76
SMC4-205ENST00000465563 HIF3AQ9Y2N7 669 aa10.33□□□□□ -0.76
SMC4-205ENST00000465563 COBLO75128 1261 aa10.32□□□□□ -0.76
SMC4-205ENST00000465563 TGFB1P01137 390 aa10.32□□□□□ -0.76
SMC4-205ENST00000465563 NUTM2GQ5VZR2 741 aa10.32□□□□□ -0.76
SMC4-205ENST00000465563 BEND4Q6ZU67 534 aa10.32□□□□□ -0.76
SMC4-205ENST00000465563 ZDHHC13Q8IUH4 622 aa10.32□□□□□ -0.76
SMC4-205ENST00000465563 USP26Q9BXU7 913 aa10.32□□□□□ -0.76
SMC4-205ENST00000465563 BRPF3Q9ULD4 1205 aa10.32□□□□□ -0.76
SMC4-205ENST00000465563 GAS2O43903 313 aaKnown RBP10.31□□□□□ -0.76
SMC4-205ENST00000465563 POLR3DP05423 398 aaPredicted RBP10.31□□□□□ -0.76
SMC4-205ENST00000465563 ESRRAP11474 423 aaPredicted RBP10.31□□□□□ -0.76
SMC4-205ENST00000465563 GLYCTKQ8IVS8 523 aa10.31□□□□□ -0.76
SMC4-205ENST00000465563 H3BRB1 525 aa10.3□□□□□ -0.76
SMC4-205ENST00000465563 EIF4EBP3O60516 100 aaPredicted RBP10.3□□□□□ -0.76
SMC4-205ENST00000465563 TUT1Q9H6E5 874 aaKnown RBP10.3□□□□□ -0.76
SMC4-205ENST00000465563 LOC100289279A0A1B0GTE1 492 aa10.29□□□□□ -0.76
SMC4-205ENST00000465563 METTL12A8MUP2 240 aa10.29□□□□□ -0.76
SMC4-205ENST00000465563 SERPINB4P48594 390 aa10.29□□□□□ -0.76
SMC4-205ENST00000465563 GSTM4Q03013 218 aa10.29□□□□□ -0.76
SMC4-205ENST00000465563 GALNT12Q8IXK2 581 aa10.29□□□□□ -0.76
SMC4-205ENST00000465563 SMG8Q8ND04 991 aaKnown RBP10.29□□□□□ -0.76
SMC4-205ENST00000465563 TMPRSS13Q9BYE2 586 aa10.29□□□□□ -0.76
SMC4-205ENST00000465563 CYP4F12Q9HCS2 524 aa10.29□□□□□ -0.76
SMC4-205ENST00000465563 MED26O95402 600 aa10.28□□□□□ -0.76
SMC4-205ENST00000465563 NEFLP07196 543 aa10.28□□□□□ -0.76
SMC4-205ENST00000465563 GRIK1P39086 918 aa10.28□□□□□ -0.76
SMC4-205ENST00000465563 C12orf50Q8NA57 414 aaPredicted RBP10.28□□□□□ -0.76
SMC4-205ENST00000465563 SUGCTQ9HAC7 445 aa10.28□□□□□ -0.76
SMC4-205ENST00000465563 A0A1W2PP55 124 aa10.27□□□□□ -0.77
SMC4-205ENST00000465563 KIAA1324LA8MWY0 1029 aaPredicted RBP10.27□□□□□ -0.77
SMC4-205ENST00000465563 ECM1Q16610 540 aa10.27□□□□□ -0.77
SMC4-205ENST00000465563 EXOSC6Q5RKV6 272 aaKnown RBP10.27□□□□□ -0.77
SMC4-205ENST00000465563 INTS5Q6P9B9 1019 aaKnown RBP10.27□□□□□ -0.77
SMC4-205ENST00000465563 CCNJLQ8IV13 435 aa10.27□□□□□ -0.77
SMC4-205ENST00000465563 A0A096LPE4 126 aa10.26□□□□□ -0.77
SMC4-205ENST00000465563 A0A1W2PPZ6 126 aa10.26□□□□□ -0.77
SMC4-205ENST00000465563 NDUFB5O43674 189 aa10.26□□□□□ -0.77
SMC4-205ENST00000465563 MAP4P27816 1152 aaKnown RBP10.26□□□□□ -0.77
SMC4-205ENST00000465563 LIN7BQ9HAP6 207 aa10.26□□□□□ -0.77
SMC4-205ENST00000465563 PRR19A6NJB7 356 aa10.25□□□□□ -0.77
SMC4-205ENST00000465563 TIAF1O95411 115 aa10.25□□□□□ -0.77
SMC4-205ENST00000465563 DLGAP3O95886 979 aa10.25□□□□□ -0.77
SMC4-205ENST00000465563 SGO2Q562F6 1265 aa10.25□□□□□ -0.77
SMC4-205ENST00000465563 SHKBP1Q8TBC3 707 aa10.25□□□□□ -0.77
SMC4-205ENST00000465563 TCF12Q99081 682 aa10.25□□□□□ -0.77
SMC4-205ENST00000465563 CLEC4MQ9H2X3 399 aaPredicted RBP10.25□□□□□ -0.77
SMC4-205ENST00000465563 RXRBP28702 533 aa10.24□□□□□ -0.77
SMC4-205ENST00000465563 ARHGAP4P98171 946 aa10.24□□□□□ -0.77
SMC4-205ENST00000465563 PCDH1Q08174 1060 aa10.24□□□□□ -0.77
SMC4-205ENST00000465563 PDE3BQ13370 1112 aa10.24□□□□□ -0.77
SMC4-205ENST00000465563 GRIA4P48058 902 aa10.23□□□□□ -0.77
SMC4-205ENST00000465563 SPRED3Q2MJR0 410 aa10.23□□□□□ -0.77
SMC4-205ENST00000465563 USPL1Q5W0Q7 1092 aa10.23□□□□□ -0.77
SMC4-205ENST00000465563 WDR64B1ANS9 1081 aa10.22□□□□□ -0.77
SMC4-205ENST00000465563 USP11P51784 963 aa10.22□□□□□ -0.77
SMC4-205ENST00000465563 ZNF423Q2M1K9 1284 aa10.22□□□□□ -0.77
SMC4-205ENST00000465563 KIAA0319Q5VV43 1072 aa10.22□□□□□ -0.77
SMC4-205ENST00000465563 GIMAP7Q8NHV1 300 aa10.22□□□□□ -0.77
SMC4-205ENST00000465563 MFSD14AQ96MC6 490 aa10.22□□□□□ -0.77
SMC4-205ENST00000465563 CITED4Q96RK1 184 aa10.22□□□□□ -0.77
SMC4-205ENST00000465563 ARID3AQ99856 593 aa10.22□□□□□ -0.77
SMC4-205ENST00000465563 CYP11A1P05108 521 aa10.21□□□□□ -0.77
SMC4-205ENST00000465563 DRD2P14416 443 aa10.21□□□□□ -0.77
SMC4-205ENST00000465563 FAM129BQ96TA1 746 aa10.21□□□□□ -0.77
SMC4-205ENST00000465563 NRSN2Q9GZP1 204 aa10.21□□□□□ -0.77
SMC4-205ENST00000465563 CPNE3O75131 537 aaKnown RBP10.2□□□□□ -0.78
SMC4-205ENST00000465563 SPINK2P20155 84 aa10.2□□□□□ -0.78
SMC4-205ENST00000465563 SOX4Q06945 474 aaPredicted RBP10.2□□□□□ -0.78
SMC4-205ENST00000465563 EHD4Q9H223 541 aa10.2□□□□□ -0.78
SMC4-205ENST00000465563 FAM95CA0A1B0GW59 222 aa10.19□□□□□ -0.78
SMC4-205ENST00000465563 MAOBP27338 520 aa10.19□□□□□ -0.78
SMC4-205ENST00000465563 PDE4CQ08493 712 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms