RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 KLHL40Q2TBA0 621 aa15.23■□□□□ 0.03
VAPB-203ENST00000463370 NSFL1CQ9UNZ2 370 aaKnown RBP15.23■□□□□ 0.03
VAPB-203ENST00000463370 RGL2O15211 777 aa15.22■□□□□ 0.03
VAPB-203ENST00000463370 ZSCAN22P10073 491 aaPredicted RBP15.22■□□□□ 0.03
VAPB-203ENST00000463370 EXOSC10Q01780 885 aaKnown RBP15.22■□□□□ 0.03
VAPB-203ENST00000463370 DHX32Q7L7V1 743 aaKnown RBP15.22■□□□□ 0.03
VAPB-203ENST00000463370 BSDC1Q9NW68 430 aaPredicted RBP15.22■□□□□ 0.03
VAPB-203ENST00000463370 MINPP1Q9UNW1 487 aa15.22■□□□□ 0.03
VAPB-203ENST00000463370 FSD2A1L4K1 749 aa15.22■□□□□ 0.03
VAPB-203ENST00000463370 GYG1P46976 350 aa15.22■□□□□ 0.03
VAPB-203ENST00000463370 UBE3CQ15386 1083 aa15.22■□□□□ 0.03
VAPB-203ENST00000463370 RFC4P35249 363 aa15.21■□□□□ 0.03
VAPB-203ENST00000463370 TRAPPC3LQ5T215 181 aa15.21■□□□□ 0.03
VAPB-203ENST00000463370 NKX2-3Q8TAU0 364 aa15.21■□□□□ 0.03
VAPB-203ENST00000463370 GPHNQ9NQX3 736 aaPredicted RBP15.21■□□□□ 0.03
VAPB-203ENST00000463370 MTMR6Q9Y217 621 aa15.21■□□□□ 0.03
VAPB-203ENST00000463370 LY75O60449 1722 aa15.21■□□□□ 0.03
VAPB-203ENST00000463370 ARAP2Q8WZ64 1704 aa15.21■□□□□ 0.03
VAPB-203ENST00000463370 C4BP0C0L5 1744 aa15.21■□□□□ 0.03
VAPB-203ENST00000463370 JAK2O60674 1132 aa15.21■□□□□ 0.03
VAPB-203ENST00000463370 KLRK1P26718 216 aa15.21■□□□□ 0.03
VAPB-203ENST00000463370 ZSCAN25Q6NSZ9 544 aa15.21■□□□□ 0.03
VAPB-203ENST00000463370 GAS2L3Q86XJ1 694 aa15.21■□□□□ 0.03
VAPB-203ENST00000463370 MAGEB6Q8N7X4 407 aa15.21■□□□□ 0.03
VAPB-203ENST00000463370 NYXQ9GZU5 481 aa15.21■□□□□ 0.03
VAPB-203ENST00000463370 NBPF3Q9H094 633 aa15.21■□□□□ 0.03
VAPB-203ENST00000463370 DENND2AQ9ULE3 1009 aa15.21■□□□□ 0.03
VAPB-203ENST00000463370 TAF1P21675 1872 aa15.21■□□□□ 0.03
VAPB-203ENST00000463370 SBF2Q86WG5 1849 aa15.2■□□□□ 0.02
VAPB-203ENST00000463370 NCLP19338 710 aaKnown RBP15.2■□□□□ 0.02
VAPB-203ENST00000463370 APOBRQ0VD83 1088 aa15.2■□□□□ 0.02
VAPB-203ENST00000463370 GTF3C6Q969F1 213 aa15.2■□□□□ 0.02
VAPB-203ENST00000463370 NLRP3Q96P20 1036 aa15.2■□□□□ 0.02
VAPB-203ENST00000463370 TRIM37O94972 964 aa15.2■□□□□ 0.02
VAPB-203ENST00000463370 F13A1P00488 732 aa15.2■□□□□ 0.02
VAPB-203ENST00000463370 HMGB1P09429 215 aaKnown RBP15.2■□□□□ 0.02
VAPB-203ENST00000463370 TM4SF1P30408 202 aa15.2■□□□□ 0.02
VAPB-203ENST00000463370 NFIXQ14938 502 aa15.2■□□□□ 0.02
VAPB-203ENST00000463370 TPTE2Q6XPS3 522 aa15.2■□□□□ 0.02
VAPB-203ENST00000463370 RBM27Q9P2N5 1060 aaKnown RBP15.2■□□□□ 0.02
VAPB-203ENST00000463370 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.19■□□□□ 0.02
VAPB-203ENST00000463370 FGD1P98174 961 aa15.19■□□□□ 0.02
VAPB-203ENST00000463370 SCRN1Q12765 414 aa15.19■□□□□ 0.02
VAPB-203ENST00000463370 IMMTQ16891 758 aaKnown RBP15.19■□□□□ 0.02
VAPB-203ENST00000463370 CAVIN1Q6NZI2 390 aaKnown RBP15.19■□□□□ 0.02
VAPB-203ENST00000463370 CTNNA3Q9UI47 895 aa15.19■□□□□ 0.02
VAPB-203ENST00000463370 COL1A1P02452 1464 aaPredicted RBP15.19■□□□□ 0.02
VAPB-203ENST00000463370 ZNF804BA4D1E1 1349 aa15.19■□□□□ 0.02
VAPB-203ENST00000463370 VPS37CA5D8V6 355 aaPredicted RBP15.19■□□□□ 0.02
VAPB-203ENST00000463370 GOLGA6L3A6NEY3 463 aa15.19■□□□□ 0.02
VAPB-203ENST00000463370 RPS8P62241 208 aaKnown RBP15.19■□□□□ 0.02
VAPB-203ENST00000463370 STRBPQ96SI9 672 aaKnown RBP15.19■□□□□ 0.02
VAPB-203ENST00000463370 AGXT2Q9BYV1 514 aa15.19■□□□□ 0.02
VAPB-203ENST00000463370 BRPF3Q9ULD4 1205 aa15.19■□□□□ 0.02
VAPB-203ENST00000463370 CNPY2Q9Y2B0 182 aa15.19■□□□□ 0.02
VAPB-203ENST00000463370 MYO5AQ9Y4I1 1855 aaKnown RBP15.19■□□□□ 0.02
VAPB-203ENST00000463370 TAF1LQ8IZX4 1826 aa15.19■□□□□ 0.02
VAPB-203ENST00000463370 COL24A1Q17RW2 1714 aa15.19■□□□□ 0.02
VAPB-203ENST00000463370 GADD45BO75293 160 aaPredicted RBP15.18■□□□□ 0.02
VAPB-203ENST00000463370 CDC37L1Q7L3B6 337 aa15.18■□□□□ 0.02
VAPB-203ENST00000463370 KRT27Q7Z3Y8 459 aa15.18■□□□□ 0.02
VAPB-203ENST00000463370 MBD4O95243 580 aa15.18■□□□□ 0.02
VAPB-203ENST00000463370 APPP05067 770 aa15.18■□□□□ 0.02
VAPB-203ENST00000463370 MAP3K12Q12852 859 aa15.18■□□□□ 0.02
VAPB-203ENST00000463370 LARP1BQ659C4 914 aaKnown RBP15.18■□□□□ 0.02
VAPB-203ENST00000463370 TBC1D10CQ8IV04 446 aa15.18■□□□□ 0.02
VAPB-203ENST00000463370 AIDAQ96BJ3 306 aa15.18■□□□□ 0.02
VAPB-203ENST00000463370 ARMT1Q9H993 441 aa15.18■□□□□ 0.02
VAPB-203ENST00000463370 EPB41L4AQ9HCS5 686 aaPredicted RBP15.18■□□□□ 0.02
VAPB-203ENST00000463370 PPFIA3O75145 1194 aa15.17■□□□□ 0.02
VAPB-203ENST00000463370 XRCC6P12956 609 aaKnown RBP eCLIP15.17■□□□□ 0.02
VAPB-203ENST00000463370 ANTXR2P58335 489 aa15.17■□□□□ 0.02
VAPB-203ENST00000463370 UBE4AQ14139 1066 aa15.17■□□□□ 0.02
VAPB-203ENST00000463370 USP48Q86UV5 1035 aa15.17■□□□□ 0.02
VAPB-203ENST00000463370 FAM84BQ96KN1 310 aaPredicted RBP15.17■□□□□ 0.02
VAPB-203ENST00000463370 NCOA5Q9HCD5 579 aaKnown RBP15.17■□□□□ 0.02
VAPB-203ENST00000463370 C4AP0C0L4 1744 aa15.17■□□□□ 0.02
VAPB-203ENST00000463370 ZNF213O14771 459 aa15.17■□□□□ 0.02
VAPB-203ENST00000463370 PRKAB2O43741 272 aa15.17■□□□□ 0.02
VAPB-203ENST00000463370 CCT2P78371 535 aaKnown RBP15.17■□□□□ 0.02
VAPB-203ENST00000463370 ADGRA1Q86SQ6 560 aa15.17■□□□□ 0.02
VAPB-203ENST00000463370 MB21D2Q8IYB1 491 aaPredicted RBP15.17■□□□□ 0.02
VAPB-203ENST00000463370 NPHP1O15259 732 aa15.16■□□□□ 0.02
VAPB-203ENST00000463370 PFKFB2O60825 505 aa15.16■□□□□ 0.02
VAPB-203ENST00000463370 CTDNEP1O95476 244 aa15.16■□□□□ 0.02
VAPB-203ENST00000463370 FERMT3Q86UX7 667 aa15.16■□□□□ 0.02
VAPB-203ENST00000463370 PROM2Q8N271 834 aa15.16■□□□□ 0.02
VAPB-203ENST00000463370 LCORLQ8N3X6 602 aa15.16■□□□□ 0.02
VAPB-203ENST00000463370 MIGA1Q8NAN2 632 aa15.16■□□□□ 0.02
VAPB-203ENST00000463370 DDX11Q96FC9 970 aa15.16■□□□□ 0.02
VAPB-203ENST00000463370 INCENPQ9NQS7 918 aa15.16■□□□□ 0.02
VAPB-203ENST00000463370 TNRC6CQ9HCJ0 1690 aaKnown RBP15.16■□□□□ 0.02
VAPB-203ENST00000463370 TMEM63CQ9P1W3 806 aa15.16■□□□□ 0.02
VAPB-203ENST00000463370 LRP2BPQ9P2M1 347 aa15.16■□□□□ 0.02
VAPB-203ENST00000463370 CARMIL3Q8ND23 1372 aa15.15■□□□□ 0.02
VAPB-203ENST00000463370 LAMA4Q16363 1823 aa15.15■□□□□ 0.02
VAPB-203ENST00000463370 CASZ1Q86V15 1759 aa15.15■□□□□ 0.02
VAPB-203ENST00000463370 GYS1P13807 737 aa15.15■□□□□ 0.02
VAPB-203ENST00000463370 PDIA3P30101 505 aaKnown RBP15.15■□□□□ 0.02
VAPB-203ENST00000463370 DNM1Q05193 864 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms