RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 EIF6P56537 245 aaKnown RBP8.19□□□□□ -1.1
COPS3-205ENST00000463097 LAMC2Q13753 1193 aa8.19□□□□□ -1.1
COPS3-205ENST00000463097 RPS26P11Q5JNZ5 115 aaPredicted RBP8.19□□□□□ -1.1
COPS3-205ENST00000463097 FILIP1Q7Z7B0 1213 aa8.19□□□□□ -1.1
COPS3-205ENST00000463097 CCDC84Q86UT8 332 aaPredicted RBP8.19□□□□□ -1.1
COPS3-205ENST00000463097 TRIM42Q8IWZ5 723 aa8.19□□□□□ -1.1
COPS3-205ENST00000463097 LRRC3Q9BY71 257 aa8.19□□□□□ -1.1
COPS3-205ENST00000463097 BHLHE41Q9C0J9 482 aaPredicted RBP8.19□□□□□ -1.1
COPS3-205ENST00000463097 EFCC1Q9HA90 598 aa8.19□□□□□ -1.1
COPS3-205ENST00000463097 MSRB2Q9Y3D2 182 aa8.19□□□□□ -1.1
COPS3-205ENST00000463097 PCDHGC4Q9Y5F7 938 aa8.19□□□□□ -1.1
COPS3-205ENST00000463097 NFKBIEO00221 500 aa8.18□□□□□ -1.1
COPS3-205ENST00000463097 PAGE1O75459 146 aa8.18□□□□□ -1.1
COPS3-205ENST00000463097 F13A1P00488 732 aa8.18□□□□□ -1.1
COPS3-205ENST00000463097 FAAP100Q0VG06 881 aa8.18□□□□□ -1.1
COPS3-205ENST00000463097 BNC2Q6ZN30 1099 aaPredicted RBP8.18□□□□□ -1.1
COPS3-205ENST00000463097 CELF2-AS1Q8N7Q2 184 aa8.18□□□□□ -1.1
COPS3-205ENST00000463097 TMEM102Q8N9M5 508 aaPredicted RBP8.18□□□□□ -1.1
COPS3-205ENST00000463097 FBXO27Q8NI29 283 aa8.18□□□□□ -1.1
COPS3-205ENST00000463097 MICAL1Q8TDZ2 1067 aa8.18□□□□□ -1.1
COPS3-205ENST00000463097 SH3TC2Q8TF17 1288 aa8.18□□□□□ -1.1
COPS3-205ENST00000463097 NXPE3Q969Y0 559 aa8.18□□□□□ -1.1
COPS3-205ENST00000463097 COL4A3BPQ9Y5P4 624 aa8.18□□□□□ -1.1
COPS3-205ENST00000463097 A0A0G2JS52 829 aa8.17□□□□□ -1.1
COPS3-205ENST00000463097 DCDC2BA2VCK2 349 aa8.17□□□□□ -1.1
COPS3-205ENST00000463097 TLR3O15455 904 aaKnown RBP8.17□□□□□ -1.1
COPS3-205ENST00000463097 DNAJC6O75061 913 aa8.17□□□□□ -1.1
COPS3-205ENST00000463097 LMNB1P20700 586 aa8.17□□□□□ -1.1
COPS3-205ENST00000463097 MCM4P33991 863 aa8.17□□□□□ -1.1
COPS3-205ENST00000463097 GIPRP48546 466 aa8.17□□□□□ -1.1
COPS3-205ENST00000463097 TNP2Q05952 138 aa8.17□□□□□ -1.1
COPS3-205ENST00000463097 SPNS2Q8IVW8 549 aa8.17□□□□□ -1.1
COPS3-205ENST00000463097 FAM169BQ8N8A8 192 aa8.17□□□□□ -1.1
COPS3-205ENST00000463097 GATAD2BQ8WXI9 593 aa8.17□□□□□ -1.1
COPS3-205ENST00000463097 HHIPQ96QV1 700 aa8.17□□□□□ -1.1
COPS3-205ENST00000463097 CRBNQ96SW2 442 aa8.17□□□□□ -1.1
COPS3-205ENST00000463097 DNAJC7Q99615 494 aa8.17□□□□□ -1.1
COPS3-205ENST00000463097 ZNF576Q9H609 170 aa8.17□□□□□ -1.1
COPS3-205ENST00000463097 SPC25Q9HBM1 224 aa8.17□□□□□ -1.1
COPS3-205ENST00000463097 STRN4Q9NRL3 753 aa8.17□□□□□ -1.1
COPS3-205ENST00000463097 FANCLQ9NW38 375 aa8.17□□□□□ -1.1
COPS3-205ENST00000463097 PPP1R12AO14974 1030 aaPredicted RBP8.16□□□□□ -1.1
COPS3-205ENST00000463097 CDC45O75419 566 aa8.16□□□□□ -1.1
COPS3-205ENST00000463097 MAPTP10636 758 aaKnown RBP8.16□□□□□ -1.1
COPS3-205ENST00000463097 ZNF165P49910 485 aa8.16□□□□□ -1.1
COPS3-205ENST00000463097 SPEM2Q0P670 501 aa8.16□□□□□ -1.1
COPS3-205ENST00000463097 DHX32Q7L7V1 743 aaKnown RBP8.16□□□□□ -1.1
COPS3-205ENST00000463097 LILRB2Q8N423 598 aa8.16□□□□□ -1.1
COPS3-205ENST00000463097 OR6P1Q8NGX9 317 aa8.16□□□□□ -1.1
COPS3-205ENST00000463097 TRPM4Q8TD43 1214 aa8.16□□□□□ -1.1
COPS3-205ENST00000463097 JARID2Q92833 1246 aaPredicted RBP8.16□□□□□ -1.1
COPS3-205ENST00000463097 NSUN5Q96P11 429 aaKnown RBP8.16□□□□□ -1.1
COPS3-205ENST00000463097 FERD3LQ96RJ6 166 aa8.16□□□□□ -1.1
COPS3-205ENST00000463097 MIR1-1HGQ9H1L0 117 aa8.16□□□□□ -1.1
COPS3-205ENST00000463097 SLKQ9H2G2 1235 aaPredicted RBP8.16□□□□□ -1.1
COPS3-205ENST00000463097 KANSL2Q9H9L4 492 aa8.16□□□□□ -1.1
COPS3-205ENST00000463097 METTL14Q9HCE5 456 aaKnown RBP8.16□□□□□ -1.1
COPS3-205ENST00000463097 PCDH12Q9NPG4 1184 aa8.16□□□□□ -1.1
COPS3-205ENST00000463097 TMEM39AQ9NV64 488 aa8.16□□□□□ -1.1
COPS3-205ENST00000463097 ACTR10Q9NZ32 417 aa8.16□□□□□ -1.1
COPS3-205ENST00000463097 GPN3Q9UHW5 284 aaPredicted RBP8.16□□□□□ -1.1
COPS3-205ENST00000463097 PCDHB5Q9Y5E4 795 aa8.16□□□□□ -1.1
COPS3-205ENST00000463097 FAM221AA4D161 298 aa8.15□□□□□ -1.1
COPS3-205ENST00000463097 PDE2AO00408 941 aaPredicted RBP8.15□□□□□ -1.1
COPS3-205ENST00000463097 IFRD2Q12894 506 aaPredicted RBP8.15□□□□□ -1.1
COPS3-205ENST00000463097 MPP2Q14168 576 aa8.15□□□□□ -1.1
COPS3-205ENST00000463097 DDR2Q16832 855 aa8.15□□□□□ -1.1
COPS3-205ENST00000463097 CWF19L2Q2TBE0 894 aaKnown RBP8.15□□□□□ -1.1
COPS3-205ENST00000463097 FBXW10Q5XX13 1052 aa8.15□□□□□ -1.1
COPS3-205ENST00000463097 ASAP3Q8TDY4 903 aa8.15□□□□□ -1.1
COPS3-205ENST00000463097 APPBP2Q92624 585 aa8.15□□□□□ -1.1
COPS3-205ENST00000463097 BHMTQ93088 406 aa8.15□□□□□ -1.1
COPS3-205ENST00000463097 ST7Q9NRC1 585 aa8.15□□□□□ -1.1
COPS3-205ENST00000463097 MARK1Q9P0L2 795 aa8.15□□□□□ -1.1
COPS3-205ENST00000463097 PRKAB1Q9Y478 270 aa8.15□□□□□ -1.1
COPS3-205ENST00000463097 SAMM50Q9Y512 469 aa8.15□□□□□ -1.1
COPS3-205ENST00000463097 PDPK1O15530 556 aa8.14□□□□□ -1.11
COPS3-205ENST00000463097 THBS1P07996 1170 aa8.14□□□□□ -1.11
COPS3-205ENST00000463097 NRLP54845 237 aa8.14□□□□□ -1.11
COPS3-205ENST00000463097 PPP2R3AQ06190 1150 aa8.14□□□□□ -1.11
COPS3-205ENST00000463097 PLD4Q96BZ4 506 aa8.14□□□□□ -1.11
COPS3-205ENST00000463097 TMX1Q9H3N1 280 aa8.14□□□□□ -1.11
COPS3-205ENST00000463097 SENP3-EIF4A1A0A087X0R7 540 aa8.13□□□□□ -1.11
COPS3-205ENST00000463097 LOC102724428A0A0B4J2F2 783 aa8.13□□□□□ -1.11
COPS3-205ENST00000463097 ESYT3A0FGR9 886 aa8.13□□□□□ -1.11
COPS3-205ENST00000463097 BMP1P13497 986 aa8.13□□□□□ -1.11
COPS3-205ENST00000463097 BMP6P22004 513 aa8.13□□□□□ -1.11
COPS3-205ENST00000463097 SIK1P57059 783 aa8.13□□□□□ -1.11
COPS3-205ENST00000463097 RASGRF1Q13972 1273 aa8.13□□□□□ -1.11
COPS3-205ENST00000463097 UBAP2LQ14157 1087 aaKnown RBP8.13□□□□□ -1.11
COPS3-205ENST00000463097 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.13□□□□□ -1.11
COPS3-205ENST00000463097 DIEXFQ68CQ4 756 aaKnown RBP8.13□□□□□ -1.11
COPS3-205ENST00000463097 RIPOR1Q6ZS17 1223 aa8.13□□□□□ -1.11
COPS3-205ENST00000463097 NOL8Q76FK4 1167 aaKnown RBP8.13□□□□□ -1.11
COPS3-205ENST00000463097 HOMER1Q86YM7 354 aa8.13□□□□□ -1.11
COPS3-205ENST00000463097 REXO1Q8N1G1 1221 aaKnown RBP8.13□□□□□ -1.11
COPS3-205ENST00000463097 SLC30A3Q99726 388 aa8.13□□□□□ -1.11
COPS3-205ENST00000463097 PBX4Q9BYU1 374 aa8.13□□□□□ -1.11
COPS3-205ENST00000463097 DNMT3LQ9UJW3 386 aa8.13□□□□□ -1.11
COPS3-205ENST00000463097 CYP8B1Q9UNU6 501 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms