RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 TPM1P09493 284 aa11.93□□□□□ -0.5
CLIP4-208ENST00000456385 GNG11P61952 73 aa11.93□□□□□ -0.5
CLIP4-208ENST00000456385 MAP3K9P80192 1104 aa11.93□□□□□ -0.5
CLIP4-208ENST00000456385 PPP2R3AQ06190 1150 aa11.93□□□□□ -0.5
CLIP4-208ENST00000456385 PSME1Q06323 249 aa11.93□□□□□ -0.5
CLIP4-208ENST00000456385 CFAP100Q494V2 611 aa11.93□□□□□ -0.5
CLIP4-208ENST00000456385 HSP90AA4PQ58FG1 418 aa11.93□□□□□ -0.5
CLIP4-208ENST00000456385 DDX46Q7L014 1031 aaKnown RBP11.93□□□□□ -0.5
CLIP4-208ENST00000456385 CARMIL3Q8ND23 1372 aa11.92□□□□□ -0.5
CLIP4-208ENST00000456385 HOXB7P09629 217 aa11.92□□□□□ -0.5
CLIP4-208ENST00000456385 PDIA3P30101 505 aaKnown RBP11.92□□□□□ -0.5
CLIP4-208ENST00000456385 CASQ1P31415 396 aa11.92□□□□□ -0.5
CLIP4-208ENST00000456385 MCMDC2Q4G0Z9 681 aa11.92□□□□□ -0.5
CLIP4-208ENST00000456385 MPRIPQ6WCQ1 1025 aa11.92□□□□□ -0.5
CLIP4-208ENST00000456385 RSRC2Q7L4I2 434 aaKnown RBP11.92□□□□□ -0.5
CLIP4-208ENST00000456385 TMEM139Q8IV31 216 aa11.92□□□□□ -0.5
CLIP4-208ENST00000456385 ZSWIM4Q9H7M6 989 aa11.92□□□□□ -0.5
CLIP4-208ENST00000456385 ATG3Q9NT62 314 aa11.92□□□□□ -0.5
CLIP4-208ENST00000456385 SPTLC2O15270 562 aa11.92□□□□□ -0.5
CLIP4-208ENST00000456385 EPHA10Q5JZY3 1008 aa11.92□□□□□ -0.5
CLIP4-208ENST00000456385 FBXO18Q8NFZ0 1043 aa11.92□□□□□ -0.5
CLIP4-208ENST00000456385 GPHNQ9NQX3 736 aaPredicted RBP11.92□□□□□ -0.5
CLIP4-208ENST00000456385 MRFAP1Q9Y605 127 aa11.92□□□□□ -0.5
CLIP4-208ENST00000456385 MYH15Q9Y2K3 1946 aa11.91□□□□□ -0.5
CLIP4-208ENST00000456385 ABCC6O95255 1503 aa11.91□□□□□ -0.5
CLIP4-208ENST00000456385 EXOSC10Q01780 885 aaKnown RBP11.91□□□□□ -0.5
CLIP4-208ENST00000456385 TOGARAM2Q6ZUX3 1019 aa11.91□□□□□ -0.5
CLIP4-208ENST00000456385 SRLQ86TD4 932 aa11.91□□□□□ -0.5
CLIP4-208ENST00000456385 GOLGA5Q8TBA6 731 aa11.91□□□□□ -0.5
CLIP4-208ENST00000456385 DHX58Q96C10 678 aa11.91□□□□□ -0.5
CLIP4-208ENST00000456385 TOPAZ1Q8N9V7 1692 aa11.91□□□□□ -0.5
CLIP4-208ENST00000456385 AGLP35573 1532 aa11.91□□□□□ -0.5
CLIP4-208ENST00000456385 ZSCAN12O43309 604 aa11.91□□□□□ -0.5
CLIP4-208ENST00000456385 TOP1P11387 765 aaKnown RBP11.91□□□□□ -0.5
CLIP4-208ENST00000456385 PFKFB1P16118 471 aa11.91□□□□□ -0.5
CLIP4-208ENST00000456385 ATP5JP18859 108 aa11.91□□□□□ -0.5
CLIP4-208ENST00000456385 MARCKSP29966 332 aaPredicted RBP11.91□□□□□ -0.5
CLIP4-208ENST00000456385 NOP2P46087 812 aaKnown RBP11.91□□□□□ -0.5
CLIP4-208ENST00000456385 LONRF2Q1L5Z9 754 aa11.91□□□□□ -0.5
CLIP4-208ENST00000456385 VSTM4Q8IW00 320 aa11.91□□□□□ -0.5
CLIP4-208ENST00000456385 LINS1Q8NG48 757 aa11.91□□□□□ -0.5
CLIP4-208ENST00000456385 AK7Q96M32 723 aa11.91□□□□□ -0.5
CLIP4-208ENST00000456385 MPHOSPH8Q99549 860 aa11.91□□□□□ -0.5
CLIP4-208ENST00000456385 RRP15Q9Y3B9 282 aaKnown RBP11.91□□□□□ -0.5
CLIP4-208ENST00000456385 IKBKBO14920 756 aa11.9□□□□□ -0.5
CLIP4-208ENST00000456385 DHX16O60231 1041 aaKnown RBP11.9□□□□□ -0.5
CLIP4-208ENST00000456385 WDHD1O75717 1129 aaPredicted RBP11.9□□□□□ -0.5
CLIP4-208ENST00000456385 TFCP2Q12800 502 aa11.9□□□□□ -0.5
CLIP4-208ENST00000456385 AXDND1Q5T1B0 1012 aaPredicted RBP11.9□□□□□ -0.5
CLIP4-208ENST00000456385 FOXR1Q6PIV2 292 aa11.9□□□□□ -0.5
CLIP4-208ENST00000456385 RAB11FIP4Q86YS3 637 aa11.9□□□□□ -0.5
CLIP4-208ENST00000456385 KCNG4Q8TDN1 519 aa11.9□□□□□ -0.5
CLIP4-208ENST00000456385 EXOC4Q96A65 974 aa11.9□□□□□ -0.5
CLIP4-208ENST00000456385 KIFC2Q96AC6 838 aa11.9□□□□□ -0.5
CLIP4-208ENST00000456385 IRX2Q9BZI1 471 aaPredicted RBP11.9□□□□□ -0.5
CLIP4-208ENST00000456385 INTS13Q9NVM9 706 aa11.9□□□□□ -0.5
CLIP4-208ENST00000456385 TAOK2Q9UL54 1235 aa11.9□□□□□ -0.5
CLIP4-208ENST00000456385 MROH7-TTC4A0A0A0MT08 1334 aa11.9□□□□□ -0.5
CLIP4-208ENST00000456385 KIF28PB7ZC32 967 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 IGKV5-2P06315 115 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 PNOCQ13519 176 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 DHX8Q14562 1220 aaKnown RBP11.89□□□□□ -0.51
CLIP4-208ENST00000456385 PDILTQ8N807 584 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 DBNDD2Q9BQY9 259 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 DESI2Q9BSY9 194 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 AGXT2Q9BYV1 514 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 PDE11AQ9HCR9 933 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 FANCLQ9NW38 375 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 VPS18Q9P253 973 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 E7EWF7 191 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 ARHGAP6O43182 974 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 N4BP1O75113 896 aaKnown RBP11.89□□□□□ -0.51
CLIP4-208ENST00000456385 HMGB1P09429 215 aaKnown RBP11.89□□□□□ -0.51
CLIP4-208ENST00000456385 ACTN2P35609 894 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 ADKP55263 362 aaKnown RBP11.89□□□□□ -0.51
CLIP4-208ENST00000456385 MYL5Q02045 173 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 MCM6Q14566 821 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 TNNI3KQ59H18 835 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 MYSM1Q5VVJ2 828 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 NBPF6Q5VWK0 638 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 RABGGTAQ92696 567 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 NBPF4Q96M43 638 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 BAG1Q99933 345 aaPredicted RBP11.89□□□□□ -0.51
CLIP4-208ENST00000456385 POLR3EQ9NVU0 708 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 CWC15Q9P013 229 aaKnown RBP11.89□□□□□ -0.51
CLIP4-208ENST00000456385 HDAC5Q9UQL6 1122 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 FPGT-TNNI3KV9GXZ4 949 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 NCAPD2Q15021 1401 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 PTPRUQ92729 1446 aa11.89□□□□□ -0.51
CLIP4-208ENST00000456385 UTYO14607 1347 aa11.88□□□□□ -0.51
CLIP4-208ENST00000456385 TXLNAP40222 546 aa11.88□□□□□ -0.51
CLIP4-208ENST00000456385 IRX3P78415 501 aaPredicted RBP11.88□□□□□ -0.51
CLIP4-208ENST00000456385 KARSQ15046 597 aaKnown RBP11.88□□□□□ -0.51
CLIP4-208ENST00000456385 WWC2Q6AWC2 1192 aa11.88□□□□□ -0.51
CLIP4-208ENST00000456385 EFCC1Q9HA90 598 aa11.88□□□□□ -0.51
CLIP4-208ENST00000456385 SUGCTQ9HAC7 445 aa11.88□□□□□ -0.51
CLIP4-208ENST00000456385 MAP2K7O14733 419 aa11.88□□□□□ -0.51
CLIP4-208ENST00000456385 YEATS4O95619 227 aa11.88□□□□□ -0.51
CLIP4-208ENST00000456385 GOLGA1Q92805 767 aa11.88□□□□□ -0.51
CLIP4-208ENST00000456385 C8orf76Q96K31 380 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms