RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 POLR3GO15318 223 aaPredicted RBP21.22■□□□□ 0.99
PTPRJ-202ENST00000440289 URI1O94763 535 aaPredicted RBP21.22■□□□□ 0.99
PTPRJ-202ENST00000440289 ILDR1Q86SU0 546 aaPredicted RBP21.22■□□□□ 0.99
PTPRJ-202ENST00000440289 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.22■□□□□ 0.99
PTPRJ-202ENST00000440289 ZBTB22O15209 634 aa21.21■□□□□ 0.99
PTPRJ-202ENST00000440289 PHKG2P15735 406 aa21.21■□□□□ 0.99
PTPRJ-202ENST00000440289 HSPA2P54652 639 aa21.21■□□□□ 0.99
PTPRJ-202ENST00000440289 CARMIL3Q8ND23 1372 aa21.21■□□□□ 0.99
PTPRJ-202ENST00000440289 FDPSP14324 419 aaKnown RBP21.21■□□□□ 0.99
PTPRJ-202ENST00000440289 CCZ1BP86790 482 aa21.21■□□□□ 0.99
PTPRJ-202ENST00000440289 CCZ1P86791 482 aaPredicted RBP21.21■□□□□ 0.99
PTPRJ-202ENST00000440289 SCARF1Q14162 830 aa21.21■□□□□ 0.99
PTPRJ-202ENST00000440289 IFNL2Q8IZJ0 200 aa21.21■□□□□ 0.99
PTPRJ-202ENST00000440289 ZNF202O95125 648 aa21.2■□□□□ 0.98
PTPRJ-202ENST00000440289 IMMTQ16891 758 aaKnown RBP21.2■□□□□ 0.98
PTPRJ-202ENST00000440289 CCDC57Q2TAC2 916 aa21.2■□□□□ 0.98
PTPRJ-202ENST00000440289 CMTR1Q8N1G2 835 aaKnown RBP21.2■□□□□ 0.98
PTPRJ-202ENST00000440289 OGFRQ9NZT2 677 aa21.2■□□□□ 0.98
PTPRJ-202ENST00000440289 ADGRL3Q9HAR2 1447 aa21.2■□□□□ 0.98
PTPRJ-202ENST00000440289 CTAGE5O15320 804 aa21.2■□□□□ 0.98
PTPRJ-202ENST00000440289 MARF1Q9Y4F3 1742 aaKnown RBP21.2■□□□□ 0.98
PTPRJ-202ENST00000440289 KIF28PB7ZC32 967 aa21.2■□□□□ 0.98
PTPRJ-202ENST00000440289 RNF113AO15541 343 aaKnown RBP21.2■□□□□ 0.98
PTPRJ-202ENST00000440289 ZAP70P43403 619 aa21.2■□□□□ 0.98
PTPRJ-202ENST00000440289 PNOCQ13519 176 aa21.2■□□□□ 0.98
PTPRJ-202ENST00000440289 USPL1Q5W0Q7 1092 aa21.2■□□□□ 0.98
PTPRJ-202ENST00000440289 HMGB1P09429 215 aaKnown RBP21.19■□□□□ 0.98
PTPRJ-202ENST00000440289 TPM4P67936 248 aa21.19■□□□□ 0.98
PTPRJ-202ENST00000440289 UTP14AQ9BVJ6 771 aaKnown RBP21.19■□□□□ 0.98
PTPRJ-202ENST00000440289 NRDCO43847 1150 aa21.19■□□□□ 0.98
PTPRJ-202ENST00000440289 FGAP02671 866 aa21.19■□□□□ 0.98
PTPRJ-202ENST00000440289 CCDC158Q5M9N0 1113 aa21.19■□□□□ 0.98
PTPRJ-202ENST00000440289 HELBQ8NG08 1087 aaPredicted RBP21.19■□□□□ 0.98
PTPRJ-202ENST00000440289 PUS7LQ9H0K6 701 aaKnown RBP21.19■□□□□ 0.98
PTPRJ-202ENST00000440289 KIAA1468Q9P260 1216 aa21.19■□□□□ 0.98
PTPRJ-202ENST00000440289 CYP27B1O15528 508 aa21.18■□□□□ 0.98
PTPRJ-202ENST00000440289 ZNF827Q17R98 1081 aa21.18■□□□□ 0.98
PTPRJ-202ENST00000440289 NAA16Q6N069 864 aaPredicted RBP21.18■□□□□ 0.98
PTPRJ-202ENST00000440289 SMARCC2Q8TAQ2 1214 aa21.18■□□□□ 0.98
PTPRJ-202ENST00000440289 CWC25Q9NXE8 425 aaPredicted RBP21.18■□□□□ 0.98
PTPRJ-202ENST00000440289 LTN1O94822 1766 aa21.18■□□□□ 0.98
PTPRJ-202ENST00000440289 MRFAP1L1Q96HT8 127 aa21.18■□□□□ 0.98
PTPRJ-202ENST00000440289 ZKSCAN3Q9BRR0 538 aa21.18■□□□□ 0.98
PTPRJ-202ENST00000440289 STRN4Q9NRL3 753 aa21.18■□□□□ 0.98
PTPRJ-202ENST00000440289 ZNF213O14771 459 aa21.18■□□□□ 0.98
PTPRJ-202ENST00000440289 SLU7O95391 586 aaKnown RBP21.18■□□□□ 0.98
PTPRJ-202ENST00000440289 CDK11BP21127 795 aaKnown RBP21.18■□□□□ 0.98
PTPRJ-202ENST00000440289 TRDNQ13061 729 aa21.18■□□□□ 0.98
PTPRJ-202ENST00000440289 RBM43Q6ZSC3 357 aaKnown RBP21.18■□□□□ 0.98
PTPRJ-202ENST00000440289 MNS1Q8NEH6 495 aa21.18■□□□□ 0.98
PTPRJ-202ENST00000440289 CHD2O14647 1828 aaKnown RBP21.17■□□□□ 0.98
PTPRJ-202ENST00000440289 ERBB3P21860 1342 aa21.17■□□□□ 0.98
PTPRJ-202ENST00000440289 PFKFB1P16118 471 aa21.17■□□□□ 0.98
PTPRJ-202ENST00000440289 ARHGAP29Q52LW3 1261 aa21.17■□□□□ 0.98
PTPRJ-202ENST00000440289 ARMCX5Q6P1M9 558 aa21.17■□□□□ 0.98
PTPRJ-202ENST00000440289 ZFP91Q96JP5 570 aaPredicted RBP21.17■□□□□ 0.98
PTPRJ-202ENST00000440289 SNAP23O00161 211 aa21.16■□□□□ 0.98
PTPRJ-202ENST00000440289 DPF2Q92785 391 aa21.16■□□□□ 0.98
PTPRJ-202ENST00000440289 GTPBP4Q9BZE4 634 aaKnown RBP21.16■□□□□ 0.98
PTPRJ-202ENST00000440289 UBASH3AP57075 661 aa21.16■□□□□ 0.98
PTPRJ-202ENST00000440289 MYSM1Q5VVJ2 828 aa21.16■□□□□ 0.98
PTPRJ-202ENST00000440289 ATG9AQ7Z3C6 839 aa21.16■□□□□ 0.98
PTPRJ-202ENST00000440289 TRMT44Q8IYL2 757 aaKnown RBP21.16■□□□□ 0.98
PTPRJ-202ENST00000440289 FMR1NBQ8N0W7 255 aaPredicted RBP21.16■□□□□ 0.98
PTPRJ-202ENST00000440289 LINC00301Q8NCQ3 95 aa21.16■□□□□ 0.98
PTPRJ-202ENST00000440289 CPLX3Q8WVH0 158 aa21.16■□□□□ 0.98
PTPRJ-202ENST00000440289 ALG1Q9BT22 464 aa21.16■□□□□ 0.98
PTPRJ-202ENST00000440289 SENP2Q9HC62 589 aa21.16■□□□□ 0.98
PTPRJ-202ENST00000440289 SYKP43405 635 aa21.16■□□□□ 0.98
PTPRJ-202ENST00000440289 KAT6BQ8WYB5 2073 aa21.15■□□□□ 0.98
PTPRJ-202ENST00000440289 NBPF26B4DH59 902 aa21.15■□□□□ 0.98
PTPRJ-202ENST00000440289 PDIA4P13667 645 aaKnown RBP21.15■□□□□ 0.98
PTPRJ-202ENST00000440289 NBPF14Q5TI25 921 aa21.15■□□□□ 0.98
PTPRJ-202ENST00000440289 E4F1Q66K89 784 aaPredicted RBP21.15■□□□□ 0.98
PTPRJ-202ENST00000440289 NBPF10Q6P3W6 841 aaKnown RBP21.15■□□□□ 0.98
PTPRJ-202ENST00000440289 NBPF11Q86T75 865 aa21.15■□□□□ 0.98
PTPRJ-202ENST00000440289 NBPF15Q8N660 670 aa21.15■□□□□ 0.98
PTPRJ-202ENST00000440289 ENGASEQ8NFI3 743 aa21.15■□□□□ 0.98
PTPRJ-202ENST00000440289 PPP1R13BQ96KQ4 1090 aa21.15■□□□□ 0.98
PTPRJ-202ENST00000440289 B4E1Z4 1266 aa21.15■□□□□ 0.98
PTPRJ-202ENST00000440289 TMEM232C9JQI7 657 aa21.15■□□□□ 0.98
PTPRJ-202ENST00000440289 FANCCQ00597 558 aa21.15■□□□□ 0.98
PTPRJ-202ENST00000440289 TSGA10IPQ3SY00 556 aa21.15■□□□□ 0.98
PTPRJ-202ENST00000440289 ZMYM1Q5SVZ6 1142 aa21.15■□□□□ 0.98
PTPRJ-202ENST00000440289 KLHL10Q6JEL2 608 aa21.15■□□□□ 0.98
PTPRJ-202ENST00000440289 XAGE2Q96GT9 111 aa21.15■□□□□ 0.98
PTPRJ-202ENST00000440289 FOXN1O15353 648 aa21.14■□□□□ 0.98
PTPRJ-202ENST00000440289 COBLO75128 1261 aa21.14■□□□□ 0.98
PTPRJ-202ENST00000440289 KRT222Q8N1A0 295 aa21.14■□□□□ 0.98
PTPRJ-202ENST00000440289 ZNF397Q8NF99 534 aaPredicted RBP21.14■□□□□ 0.98
PTPRJ-202ENST00000440289 EYA2O00167 538 aa21.14■□□□□ 0.97
PTPRJ-202ENST00000440289 ADALQ6DHV7 355 aa21.14■□□□□ 0.97
PTPRJ-202ENST00000440289 TOM1L2Q6ZVM7 507 aa21.14■□□□□ 0.97
PTPRJ-202ENST00000440289 LLPHQ9BRT6 129 aaKnown RBP21.14■□□□□ 0.97
PTPRJ-202ENST00000440289 WDHD1O75717 1129 aaPredicted RBP21.13■□□□□ 0.97
PTPRJ-202ENST00000440289 EXOSC10Q01780 885 aaKnown RBP21.13■□□□□ 0.97
PTPRJ-202ENST00000440289 FEZ1Q99689 392 aa21.13■□□□□ 0.97
PTPRJ-202ENST00000440289 SEC31AO94979 1220 aaKnown RBP21.13■□□□□ 0.97
PTPRJ-202ENST00000440289 METTL24Q5JXM2 366 aa21.13■□□□□ 0.97
PTPRJ-202ENST00000440289 NKX2-3Q8TAU0 364 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms