RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 OPA1O60313 960 aa12.71□□□□□ -0.37
SEMA4D-211ENST00000438547 GSPT1P15170 499 aaKnown RBP12.71□□□□□ -0.37
SEMA4D-211ENST00000438547 DESP17661 470 aa12.71□□□□□ -0.37
SEMA4D-211ENST00000438547 RXRAP19793 462 aa12.71□□□□□ -0.37
SEMA4D-211ENST00000438547 GNAQP50148 359 aa12.71□□□□□ -0.37
SEMA4D-211ENST00000438547 CCDC152Q4G0S7 254 aa12.71□□□□□ -0.37
SEMA4D-211ENST00000438547 FAM227BQ96M60 508 aa12.71□□□□□ -0.37
SEMA4D-211ENST00000438547 CCDC42Q96M95 316 aa12.71□□□□□ -0.37
SEMA4D-211ENST00000438547 KIAA0556O60303 1618 aa12.71□□□□□ -0.37
SEMA4D-211ENST00000438547 PHACTR2O75167 634 aa12.71□□□□□ -0.38
SEMA4D-211ENST00000438547 RHOXF2BP0C7M4 288 aa12.71□□□□□ -0.38
SEMA4D-211ENST00000438547 RHOXF2Q9BQY4 288 aa12.71□□□□□ -0.38
SEMA4D-211ENST00000438547 MMRN2Q9H8L6 949 aa12.71□□□□□ -0.38
SEMA4D-211ENST00000438547 VPS18Q9P253 973 aa12.71□□□□□ -0.38
SEMA4D-211ENST00000438547 SPECC1LQ69YQ0 1117 aa12.71□□□□□ -0.38
SEMA4D-211ENST00000438547 DTNBO60941 627 aa12.7□□□□□ -0.38
SEMA4D-211ENST00000438547 CCDC129Q6ZRS4 1044 aa12.7□□□□□ -0.38
SEMA4D-211ENST00000438547 ZCRB1Q8TBF4 217 aaKnown RBP12.7□□□□□ -0.38
SEMA4D-211ENST00000438547 BABAM1Q9NWV8 329 aa12.7□□□□□ -0.38
SEMA4D-211ENST00000438547 GAS2L3Q86XJ1 694 aa12.7□□□□□ -0.38
SEMA4D-211ENST00000438547 PTPRTO14522 1441 aa12.7□□□□□ -0.38
SEMA4D-211ENST00000438547 YTHDC2Q9H6S0 1430 aaKnown RBP12.7□□□□□ -0.38
SEMA4D-211ENST00000438547 UBXN1Q04323 297 aa12.7□□□□□ -0.38
SEMA4D-211ENST00000438547 CNGA4Q8IV77 575 aa12.7□□□□□ -0.38
SEMA4D-211ENST00000438547 ZNF518AQ6AHZ1 1483 aa12.7□□□□□ -0.38
SEMA4D-211ENST00000438547 KIAA0753Q2KHM9 967 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 TRMT2AQ8IZ69 625 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 LUC7L2Q9Y383 392 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 AKR1B15C9JRZ8 316 aaPredicted RBP12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 CALML3P27482 149 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 HOXC9P31274 260 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 TIMM10P62072 90 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 PPP2R3AQ06190 1150 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 ANO1Q5XXA6 986 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 PAF1Q8N7H5 531 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 IQUBQ8NA54 791 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 ATRIPQ8WXE1 791 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 CAPZA3Q96KX2 299 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 NAA16Q6N069 864 aaPredicted RBP12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 STXBP4Q6ZWJ1 553 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 ZBTB9Q96C00 473 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 RNMTO43148 476 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 CALM1P0DP23 149 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 CALM2P0DP24 149 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 CALM3P0DP25 149 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 GNAT2P19087 354 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 GTF2A1P52655 376 aaPredicted RBP12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 HEATR3Q7Z4Q2 680 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 NCOA5Q9HCD5 579 aaKnown RBP12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 ABCC4O15439 1325 aa12.69□□□□□ -0.38
SEMA4D-211ENST00000438547 ZNF500O60304 480 aaPredicted RBP12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 TSPY3P0CV98 308 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 TSPY8P0CW00 308 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 KRT2P35908 639 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 FANCCQ00597 558 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 CDC37L1Q7L3B6 337 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 HOOK3Q86VS8 718 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 DBNDD2Q9BQY9 259 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 HOXB7P09629 217 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 GIGYF2Q6Y7W6 1299 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 SELENOOQ9BVL4 669 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 TM6SF1Q9BZW5 370 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 C6orf229H3BNL8 230 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 EBAG9O00559 213 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 TNNI3KQ59H18 835 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 HDXQ7Z353 690 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 PLCD3Q8N3E9 789 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 RPGRQ92834 1020 aaKnown RBP12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 FPGT-TNNI3KV9GXZ4 949 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 USP19O94966 1318 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 ATP2C2O75185 946 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 PKP1Q13835 747 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 UBE4AQ14139 1066 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 NBPF11Q86T75 865 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 KLHDC4Q8TBB5 520 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 KIF24Q5T7B8 1368 aa12.68□□□□□ -0.38
SEMA4D-211ENST00000438547 TBCAO75347 108 aaKnown RBP12.67□□□□□ -0.38
SEMA4D-211ENST00000438547 CCDC172P0C7W6 258 aa12.67□□□□□ -0.38
SEMA4D-211ENST00000438547 RILPL1Q5EBL4 403 aa12.67□□□□□ -0.38
SEMA4D-211ENST00000438547 TICAM2Q86XR7 235 aa12.67□□□□□ -0.38
SEMA4D-211ENST00000438547 SYCP3Q8IZU3 236 aa12.67□□□□□ -0.38
SEMA4D-211ENST00000438547 RTL9Q8NET4 1388 aa12.67□□□□□ -0.38
SEMA4D-211ENST00000438547 ELF2Q15723 593 aa12.67□□□□□ -0.38
SEMA4D-211ENST00000438547 ASXL2Q76L83 1435 aa12.67□□□□□ -0.38
SEMA4D-211ENST00000438547 CCDC155Q8N6L0 562 aa12.67□□□□□ -0.38
SEMA4D-211ENST00000438547 HELBQ8NG08 1087 aaPredicted RBP12.67□□□□□ -0.38
SEMA4D-211ENST00000438547 CARD6Q9BX69 1037 aa12.67□□□□□ -0.38
SEMA4D-211ENST00000438547 IMPACTQ9P2X3 320 aa12.67□□□□□ -0.38
SEMA4D-211ENST00000438547 KCNH3Q9ULD8 1083 aa12.67□□□□□ -0.38
SEMA4D-211ENST00000438547 IRX3P78415 501 aaPredicted RBP12.67□□□□□ -0.38
SEMA4D-211ENST00000438547 MAGEB6P1A0A0J9YX57 407 aa12.66□□□□□ -0.38
SEMA4D-211ENST00000438547 BICDL2A1A5D9 508 aa12.66□□□□□ -0.38
SEMA4D-211ENST00000438547 NAPAP54920 295 aa12.66□□□□□ -0.38
SEMA4D-211ENST00000438547 OTUD7BQ6GQQ9 843 aa12.66□□□□□ -0.38
SEMA4D-211ENST00000438547 MAGEB6Q8N7X4 407 aa12.66□□□□□ -0.38
SEMA4D-211ENST00000438547 IGSF22Q8N9C0 903 aa12.66□□□□□ -0.38
SEMA4D-211ENST00000438547 IP6K1Q92551 441 aa12.66□□□□□ -0.38
SEMA4D-211ENST00000438547 CABP5Q9NP86 173 aa12.66□□□□□ -0.38
SEMA4D-211ENST00000438547 FSD2A1L4K1 749 aa12.66□□□□□ -0.38
SEMA4D-211ENST00000438547 MICALL1Q8N3F8 863 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms