RNA–Protein interactions for RNA: ENST00000435314.5

RFX5-208, Transcript of regulatory factor X5, human

TSL 4

Gene RFX5, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX5-208	ENST00000435314	POLG2	Q9UHN1	485 aa		6.1	□□□□□ -1.43
RFX5-208	ENST00000435314	CDC42BPB	Q9Y5S2	1711 aa		6.1	□□□□□ -1.43
RFX5-208	ENST00000435314	RIMS1	Q86UR5	1692 aa	Known RBP	6.1	□□□□□ -1.43
RFX5-208	ENST00000435314	EFCAB5	A4FU69	1503 aa		6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	TRIM6-TRIM34	B2RNG4	842 aa		6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	DHX16	O60231	1041 aa	Known RBP	6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	HIP1R	O75146	1068 aa		6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	RAPGEF3	O95398	923 aa		6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	GFOD2	Q3B7J2	385 aa		6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	PUS10	Q3MIT2	529 aa	Known RBP	6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	CCDC93	Q567U6	631 aa		6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	FAM102B	Q5T8I3	360 aa		6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	KANK3	Q6NY19	840 aa		6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	CC2D1A	Q6P1N0	951 aa	Predicted RBP	6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	ATCAY	Q86WG3	371 aa		6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	NINJ1	Q92982	152 aa		6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	AKAP2	Q9Y2D5	859 aa		6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	DAAM1	Q9Y4D1	1078 aa		6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	CTDP1	Q9Y5B0	961 aa	Predicted RBP	6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	KIF14	Q15058	1648 aa		6.09	□□□□□ -1.43
RFX5-208	ENST00000435314	ARHGEF40	Q8TER5	1519 aa		6.09	□□□□□ -1.44
RFX5-208	ENST00000435314	EEA1	Q15075	1411 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	KDM2B	Q8NHM5	1336 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314		A0A087X0B3	334 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	SMAP	O00193	183 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	ZBTB39	O15060	712 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	USP17L7	P0C7H9	530 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	TRIM27	P14373	513 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	POLD1	P28340	1107 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	PPM1F	P49593	454 aa	Predicted RBP	6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	TERF1	P54274	439 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	GEMIN4	P57678	1058 aa	Known RBP	6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	PIN1	Q13526	163 aa	Predicted RBP	6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	PWP1	Q13610	501 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	C21orf62-AS1	Q17RA5	79 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314		Q3C1V9	767 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	ANO1	Q5XXA6	986 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	WWC2	Q6AWC2	1192 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	POTEE	Q6S8J3	1075 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	CASC1	Q6TDU7	716 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	KRT77	Q7Z794	578 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	DZIP3	Q86Y13	1208 aa	Known RBP	6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	NIM1K	Q8IY84	436 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	TTC30B	Q8N4P2	665 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	MAGEB6	Q8N7X4	407 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	ANKRD42	Q8N9B4	389 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	NUDT16	Q96DE0	195 aa	Known RBP	6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	SHD	Q96IW2	340 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	CAMKK2	Q96RR4	588 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	TSPAN18	Q96SJ8	248 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	ARHGAP9	Q9BRR9	750 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	NOC4L	Q9BVI4	516 aa	Known RBP	6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	SELENOO	Q9BVL4	669 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	NT5C1A	Q9BXI3	368 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	ST7	Q9NRC1	585 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	CLIC5	Q9NZA1	410 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	FBXO2	Q9UK22	296 aa	Predicted RBP	6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	MAPK8IP1	Q9UQF2	711 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	FER1L4	A9Z1Z3	1794 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	NEO1	Q92859	1461 aa		6.08	□□□□□ -1.44
RFX5-208	ENST00000435314	CFAP74	Q9C0B2	1584 aa		6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	KATNA1	O75449	491 aa		6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	PDGFA	P04085	211 aa		6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	EIF4A3	P38919	411 aa	Known RBP	6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	APOBR	Q0VD83	1088 aa		6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	SLC4A8	Q2Y0W8	1093 aa		6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	MTERF2	Q49AM1	385 aa		6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	AKAP4	Q5JQC9	854 aa		6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	SWT1	Q5T5J6	900 aa	Known RBP	6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	PCNX4	Q63HM2	1172 aa		6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	RNF180	Q86T96	592 aa		6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	ENAH	Q8N8S7	591 aa	Predicted RBP	6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	PPHLN1	Q8NEY8	458 aa	Known RBP	6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	ATL2	Q8NHH9	583 aa		6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	EDEM1	Q92611	657 aa		6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	OTUD5	Q96G74	571 aa		6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	HERPUD2	Q9BSE4	406 aa		6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	RTFDC1	Q9BY42	306 aa	Predicted RBP	6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	USP25	Q9UHP3	1055 aa		6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	NAP1L2	Q9ULW6	460 aa	Predicted RBP	6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	RABGAP1	Q9Y3P9	1069 aa		6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	ZMYM4	Q5VZL5	1548 aa		6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	CDC42BPA	Q5VT25	1732 aa		6.07	□□□□□ -1.44
RFX5-208	ENST00000435314	CPNE3	O75131	537 aa	Known RBP	6.06	□□□□□ -1.44
RFX5-208	ENST00000435314	NBPF7	P0C2Y1	421 aa	Predicted RBP	6.06	□□□□□ -1.44
RFX5-208	ENST00000435314	HAL	P42357	657 aa		6.06	□□□□□ -1.44
RFX5-208	ENST00000435314	SARS	P49591	514 aa	Known RBP	6.06	□□□□□ -1.44
RFX5-208	ENST00000435314	NEK3	P51956	506 aa		6.06	□□□□□ -1.44
RFX5-208	ENST00000435314	DNM1	Q05193	864 aa	Known RBP	6.06	□□□□□ -1.44
RFX5-208	ENST00000435314	PICALM	Q13492	652 aa		6.06	□□□□□ -1.44
RFX5-208	ENST00000435314	PTPRN	Q16849	979 aa		6.06	□□□□□ -1.44
RFX5-208	ENST00000435314	LONRF1	Q17RB8	773 aa		6.06	□□□□□ -1.44
RFX5-208	ENST00000435314	ERFE	Q4G0M1	354 aa		6.06	□□□□□ -1.44
RFX5-208	ENST00000435314	PERM1	Q5SV97	790 aa		6.06	□□□□□ -1.44
RFX5-208	ENST00000435314	HYI	Q5T013	277 aa		6.06	□□□□□ -1.44
RFX5-208	ENST00000435314	C1QTNF12	Q5T7M4	302 aa		6.06	□□□□□ -1.44
RFX5-208	ENST00000435314	NBPF14	Q5TI25	921 aa		6.06	□□□□□ -1.44
RFX5-208	ENST00000435314	USPL1	Q5W0Q7	1092 aa		6.06	□□□□□ -1.44
RFX5-208	ENST00000435314	IL31	Q6EBC2	164 aa		6.06	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms