RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 ZC3H15Q8WU90 426 aaKnown RBP8.5□□□□□ -1.05
CNOT4-206ENST00000428680 NOB1Q9ULX3 412 aaKnown RBP8.5□□□□□ -1.05
CNOT4-206ENST00000428680 SAMM50Q9Y512 469 aa8.5□□□□□ -1.05
CNOT4-206ENST00000428680 PIP4K2AP48426 406 aaPredicted RBP8.5□□□□□ -1.05
CNOT4-206ENST00000428680 IRX3P78415 501 aaPredicted RBP8.5□□□□□ -1.05
CNOT4-206ENST00000428680 SLC4A8Q2Y0W8 1093 aa8.5□□□□□ -1.05
CNOT4-206ENST00000428680 SH3TC1Q8TE82 1336 aa8.5□□□□□ -1.05
CNOT4-206ENST00000428680 ITPK1Q13572 414 aa8.5□□□□□ -1.05
CNOT4-206ENST00000428680 TTF1Q15361 905 aaPredicted RBP8.5□□□□□ -1.05
CNOT4-206ENST00000428680 CCDC24Q8N4L8 307 aa8.5□□□□□ -1.05
CNOT4-206ENST00000428680 TTC16Q8NEE8 873 aa8.5□□□□□ -1.05
CNOT4-206ENST00000428680 PI4KAP2A4QPH2 592 aa8.5□□□□□ -1.05
CNOT4-206ENST00000428680 BBOX1O75936 387 aa8.5□□□□□ -1.05
CNOT4-206ENST00000428680 PI4KAP1Q8N8J0 262 aa8.5□□□□□ -1.05
CNOT4-206ENST00000428680 SH2D4AQ9H788 454 aa8.5□□□□□ -1.05
CNOT4-206ENST00000428680 SLC5A4Q9NY91 659 aa8.5□□□□□ -1.05
CNOT4-206ENST00000428680 BCAR3O75815 825 aa8.49□□□□□ -1.05
CNOT4-206ENST00000428680 CDKL5O76039 1030 aa8.49□□□□□ -1.05
CNOT4-206ENST00000428680 USP48Q86UV5 1035 aa8.49□□□□□ -1.05
CNOT4-206ENST00000428680 WDR63Q8IWG1 891 aa8.49□□□□□ -1.05
CNOT4-206ENST00000428680 JARID2Q92833 1246 aaPredicted RBP8.49□□□□□ -1.05
CNOT4-206ENST00000428680 SNRKQ9NRH2 765 aa8.49□□□□□ -1.05
CNOT4-206ENST00000428680 KCPQ6ZWJ8 1503 aa8.49□□□□□ -1.05
CNOT4-206ENST00000428680 YBX3P16989 372 aaKnown RBP eCLIP8.49□□□□□ -1.05
CNOT4-206ENST00000428680 CENPQQ7L2Z9 268 aaPredicted RBP8.49□□□□□ -1.05
CNOT4-206ENST00000428680 NLGN2Q8NFZ4 835 aa8.49□□□□□ -1.05
CNOT4-206ENST00000428680 BCORQ6W2J9 1755 aa8.49□□□□□ -1.05
CNOT4-206ENST00000428680 KIF1BPQ96EK5 621 aa8.49□□□□□ -1.05
CNOT4-206ENST00000428680 CT47B1P0C2W7 299 aaPredicted RBP8.49□□□□□ -1.05
CNOT4-206ENST00000428680 FBLN1P23142 703 aa8.49□□□□□ -1.05
CNOT4-206ENST00000428680 RDXP35241 583 aaKnown RBP8.49□□□□□ -1.05
CNOT4-206ENST00000428680 NCBP1Q09161 790 aaKnown RBP8.49□□□□□ -1.05
CNOT4-206ENST00000428680 NAA16Q6N069 864 aaPredicted RBP8.49□□□□□ -1.05
CNOT4-206ENST00000428680 DDX11Q96FC9 970 aa8.49□□□□□ -1.05
CNOT4-206ENST00000428680 VAT1LQ9HCJ6 419 aa8.49□□□□□ -1.05
CNOT4-206ENST00000428680 LIG1P18858 919 aa8.48□□□□□ -1.05
CNOT4-206ENST00000428680 PDE3AQ14432 1141 aa8.48□□□□□ -1.05
CNOT4-206ENST00000428680 TAF12Q16514 161 aa8.48□□□□□ -1.05
CNOT4-206ENST00000428680 ATP2B3Q16720 1220 aa8.48□□□□□ -1.05
CNOT4-206ENST00000428680 LDHBP07195 334 aaKnown RBP8.48□□□□□ -1.05
CNOT4-206ENST00000428680 FKBP1BP68106 108 aa8.48□□□□□ -1.05
CNOT4-206ENST00000428680 FLIIQ13045 1269 aa8.48□□□□□ -1.05
CNOT4-206ENST00000428680 AAMPQ13685 434 aa8.48□□□□□ -1.05
CNOT4-206ENST00000428680 GPC2Q8N158 579 aa8.48□□□□□ -1.05
CNOT4-206ENST00000428680 IFT57Q9NWB7 429 aa8.48□□□□□ -1.05
CNOT4-206ENST00000428680 DDX60Q8IY21 1712 aaKnown RBP8.48□□□□□ -1.05
CNOT4-206ENST00000428680 CCDC196A0A1B0GTZ2 297 aa8.48□□□□□ -1.05
CNOT4-206ENST00000428680 BOLA2Q9H3K6 86 aa8.48□□□□□ -1.05
CNOT4-206ENST00000428680 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.48□□□□□ -1.05
CNOT4-206ENST00000428680 KIF3CO14782 793 aa8.47□□□□□ -1.05
CNOT4-206ENST00000428680 MYCP01106 439 aaPredicted RBP8.47□□□□□ -1.05
CNOT4-206ENST00000428680 CNGA1P29973 690 aa8.47□□□□□ -1.05
CNOT4-206ENST00000428680 USPL1Q5W0Q7 1092 aa8.47□□□□□ -1.05
CNOT4-206ENST00000428680 MAST3O60307 1309 aa8.47□□□□□ -1.05
CNOT4-206ENST00000428680 MYO3BQ8WXR4 1341 aa8.47□□□□□ -1.05
CNOT4-206ENST00000428680 CYP7A1P22680 504 aa8.47□□□□□ -1.05
CNOT4-206ENST00000428680 INTS5Q6P9B9 1019 aaKnown RBP8.47□□□□□ -1.05
CNOT4-206ENST00000428680 SDF4Q9BRK5 362 aa8.47□□□□□ -1.05
CNOT4-206ENST00000428680 U3KPZ7 1027 aaPredicted RBP8.47□□□□□ -1.05
CNOT4-206ENST00000428680 KLRG2A4D1S0 409 aaPredicted RBP8.47□□□□□ -1.05
CNOT4-206ENST00000428680 PABPC4Q13310 644 aaKnown RBP eCLIP8.47□□□□□ -1.05
CNOT4-206ENST00000428680 MAP4K4O95819 1239 aaPredicted RBP8.47□□□□□ -1.05
CNOT4-206ENST00000428680 NAP1L1P55209 391 aaKnown RBP8.47□□□□□ -1.05
CNOT4-206ENST00000428680 ERFEQ4G0M1 354 aa8.47□□□□□ -1.05
CNOT4-206ENST00000428680 DNAJC10Q8IXB1 793 aa8.47□□□□□ -1.05
CNOT4-206ENST00000428680 ZNF609O15014 1411 aa8.47□□□□□ -1.05
CNOT4-206ENST00000428680 F6X3S4 739 aa8.46□□□□□ -1.05
CNOT4-206ENST00000428680 CDC45O75419 566 aa8.46□□□□□ -1.05
CNOT4-206ENST00000428680 NOP2P46087 812 aaKnown RBP8.46□□□□□ -1.05
CNOT4-206ENST00000428680 LRSAM1Q6UWE0 723 aa8.46□□□□□ -1.05
CNOT4-206ENST00000428680 COL1A1P02452 1464 aaPredicted RBP8.46□□□□□ -1.05
CNOT4-206ENST00000428680 IGSF3O75054 1194 aa8.46□□□□□ -1.06
CNOT4-206ENST00000428680 MAP2K2P36507 400 aa8.46□□□□□ -1.06
CNOT4-206ENST00000428680 NFIXQ14938 502 aa8.46□□□□□ -1.06
CNOT4-206ENST00000428680 DCAF15Q66K64 600 aa8.46□□□□□ -1.06
CNOT4-206ENST00000428680 LMBR1LQ6UX01 489 aa8.46□□□□□ -1.06
CNOT4-206ENST00000428680 TTC6Q86TZ1 520 aa8.46□□□□□ -1.06
CNOT4-206ENST00000428680 HELBQ8NG08 1087 aaPredicted RBP8.46□□□□□ -1.06
CNOT4-206ENST00000428680 ZNF496Q96IT1 587 aaPredicted RBP8.46□□□□□ -1.06
CNOT4-206ENST00000428680 NBPF3Q9H094 633 aa8.46□□□□□ -1.06
CNOT4-206ENST00000428680 CCDC8Q9H0W5 538 aaPredicted RBP8.46□□□□□ -1.06
CNOT4-206ENST00000428680 JAG2Q9Y219 1238 aa8.46□□□□□ -1.06
CNOT4-206ENST00000428680 TNNT3P45378 269 aaPredicted RBP8.46□□□□□ -1.06
CNOT4-206ENST00000428680 RPAP2Q8IXW5 612 aaPredicted RBP8.46□□□□□ -1.06
CNOT4-206ENST00000428680 WASF1Q92558 559 aa8.46□□□□□ -1.06
CNOT4-206ENST00000428680 KAT14Q9H8E8 782 aa8.46□□□□□ -1.06
CNOT4-206ENST00000428680 EXOC6BQ9Y2D4 811 aa8.46□□□□□ -1.06
CNOT4-206ENST00000428680 COL3A1P02461 1466 aaPredicted RBP8.46□□□□□ -1.06
CNOT4-206ENST00000428680 DUOX1Q9NRD9 1551 aa8.46□□□□□ -1.06
CNOT4-206ENST00000428680 TMEM88BA6NKF7 163 aa8.45□□□□□ -1.06
CNOT4-206ENST00000428680 HCLS1P14317 486 aaPredicted RBP8.45□□□□□ -1.06
CNOT4-206ENST00000428680 PDCP20941 246 aa8.45□□□□□ -1.06
CNOT4-206ENST00000428680 HOXA10P31260 410 aaPredicted RBP8.45□□□□□ -1.06
CNOT4-206ENST00000428680 CCDC97Q96F63 343 aaPredicted RBP8.45□□□□□ -1.06
CNOT4-206ENST00000428680 RAB34Q9BZG1 259 aa8.45□□□□□ -1.06
CNOT4-206ENST00000428680 TIAM2Q8IVF5 1701 aa8.45□□□□□ -1.06
CNOT4-206ENST00000428680 KIAA1551Q9HCM1 1747 aa8.45□□□□□ -1.06
CNOT4-206ENST00000428680 TSPY3P0CV98 308 aa8.45□□□□□ -1.06
CNOT4-206ENST00000428680 TSPY8P0CW00 308 aa8.45□□□□□ -1.06
CNOT4-206ENST00000428680 KIF5BP33176 963 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms