RNA–Protein interactions for RNA: ENST00000424751.2

LINC00839-201, long intergenic non-protein coding RNA 839, humanhuman

TSL 2

Gene LINC00839, Length 2,252 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-201ENST00000424751 ZNF500O60304 480 aaPredicted RBP17.06■□□□□ 0.32
LINC00839-201ENST00000424751 SNX14Q9Y5W7 946 aa17.06■□□□□ 0.32
LINC00839-201ENST00000424751 CACNA1SQ13698 1873 aa17.05■□□□□ 0.32
LINC00839-201ENST00000424751 PDLIM2Q96JY6 352 aa17.05■□□□□ 0.32
LINC00839-201ENST00000424751 WWC3Q9ULE0 1092 aa17.05■□□□□ 0.32
LINC00839-201ENST00000424751 CCDC171Q6TFL3 1326 aa17.05■□□□□ 0.32
LINC00839-201ENST00000424751 RGL2O15211 777 aa17.05■□□□□ 0.32
LINC00839-201ENST00000424751 HSPA4P34932 840 aa17.05■□□□□ 0.32
LINC00839-201ENST00000424751 MAP7D2Q96T17 732 aa17.05■□□□□ 0.32
LINC00839-201ENST00000424751 FOXP2O15409 715 aa17.04■□□□□ 0.32
LINC00839-201ENST00000424751 MCM5P33992 734 aa17.04■□□□□ 0.32
LINC00839-201ENST00000424751 PUS7LQ9H0K6 701 aaKnown RBP17.04■□□□□ 0.32
LINC00839-201ENST00000424751 RBM8AQ9Y5S9 174 aaKnown RBP17.04■□□□□ 0.32
LINC00839-201ENST00000424751 COL11A2P13942 1736 aaPredicted RBP17.04■□□□□ 0.32
LINC00839-201ENST00000424751 MAST3O60307 1309 aa17.04■□□□□ 0.32
LINC00839-201ENST00000424751 SLC5A1P13866 664 aa17.04■□□□□ 0.32
LINC00839-201ENST00000424751 SLC15A2Q16348 729 aa17.04■□□□□ 0.32
LINC00839-201ENST00000424751 ARID4AP29374 1257 aaPredicted RBP17.03■□□□□ 0.32
LINC00839-201ENST00000424751 TCEANC2Q96MN5 208 aa17.03■□□□□ 0.32
LINC00839-201ENST00000424751 RBSNQ9H1K0 784 aa17.03■□□□□ 0.32
LINC00839-201ENST00000424751 CSPP1Q1MSJ5 1256 aa17.03■□□□□ 0.32
LINC00839-201ENST00000424751 ILDR1Q86SU0 546 aaPredicted RBP17.03■□□□□ 0.32
LINC00839-201ENST00000424751 FAM84BQ96KN1 310 aaPredicted RBP17.03■□□□□ 0.32
LINC00839-201ENST00000424751 PRPF40AO75400 957 aaKnown RBP17.02■□□□□ 0.32
LINC00839-201ENST00000424751 IDH1O75874 414 aaKnown RBP17.02■□□□□ 0.32
LINC00839-201ENST00000424751 NEK4P51957 841 aa17.02■□□□□ 0.32
LINC00839-201ENST00000424751 ZMYM1Q5SVZ6 1142 aa17.02■□□□□ 0.32
LINC00839-201ENST00000424751 TTLL5Q6EMB2 1281 aa17.02■□□□□ 0.32
LINC00839-201ENST00000424751 RNF113AO15541 343 aaKnown RBP17.01■□□□□ 0.31
LINC00839-201ENST00000424751 NECTIN1Q15223 517 aa17.01■□□□□ 0.31
LINC00839-201ENST00000424751 CRY2Q49AN0 593 aa17.01■□□□□ 0.31
LINC00839-201ENST00000424751 SPATA5Q8NB90 893 aa17.01■□□□□ 0.31
LINC00839-201ENST00000424751 GPSM2P81274 684 aa17.01■□□□□ 0.31
LINC00839-201ENST00000424751 GRAPQ13588 217 aa17.01■□□□□ 0.31
LINC00839-201ENST00000424751 NKX2-3Q8TAU0 364 aa17.01■□□□□ 0.31
LINC00839-201ENST00000424751 GRAPLQ8TC17 118 aaPredicted RBP17.01■□□□□ 0.31
LINC00839-201ENST00000424751 MAP4K1Q92918 833 aa17.01■□□□□ 0.31
LINC00839-201ENST00000424751 RGPD3A6NKT7 1758 aaPredicted RBP17.01■□□□□ 0.31
LINC00839-201ENST00000424751 RGPD4Q7Z3J3 1758 aa17.01■□□□□ 0.31
LINC00839-201ENST00000424751 NRXN2Q9P2S2 1712 aa17■□□□□ 0.31
LINC00839-201ENST00000424751 ST5P78524 1137 aa17■□□□□ 0.31
LINC00839-201ENST00000424751 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17■□□□□ 0.31
LINC00839-201ENST00000424751 IRS2Q9Y4H2 1338 aa17■□□□□ 0.31
LINC00839-201ENST00000424751 SLC27A2O14975 620 aa17■□□□□ 0.31
LINC00839-201ENST00000424751 WASHC4Q2M389 1173 aa17■□□□□ 0.31
LINC00839-201ENST00000424751 MCMDC2Q4G0Z9 681 aa17■□□□□ 0.31
LINC00839-201ENST00000424751 CREB3L3Q68CJ9 461 aa17■□□□□ 0.31
LINC00839-201ENST00000424751 LRSAM1Q6UWE0 723 aa17■□□□□ 0.31
LINC00839-201ENST00000424751 ADGRA1Q86SQ6 560 aa17■□□□□ 0.31
LINC00839-201ENST00000424751 RUFY2Q8WXA3 655 aa17■□□□□ 0.31
LINC00839-201ENST00000424751 RPGRQ92834 1020 aaKnown RBP17■□□□□ 0.31
LINC00839-201ENST00000424751 ZKSCAN5Q9Y2L8 839 aa17■□□□□ 0.31
LINC00839-201ENST00000424751 HSP90B1P14625 803 aaKnown RBP16.99■□□□□ 0.31
LINC00839-201ENST00000424751 PKP1Q13835 747 aa16.99■□□□□ 0.31
LINC00839-201ENST00000424751 GPT2Q8TD30 523 aa16.99■□□□□ 0.31
LINC00839-201ENST00000424751 R3HCC1Q9Y3T6 440 aaKnown RBP16.99■□□□□ 0.31
LINC00839-201ENST00000424751 DOCK2Q92608 1830 aa16.99■□□□□ 0.31
LINC00839-201ENST00000424751 MBD3O95983 291 aa16.99■□□□□ 0.31
LINC00839-201ENST00000424751 SLC9C2Q5TAH2 1124 aa16.99■□□□□ 0.31
LINC00839-201ENST00000424751 ZNF384Q8TF68 577 aa16.99■□□□□ 0.31
LINC00839-201ENST00000424751 CCDC39Q9UFE4 941 aa16.99■□□□□ 0.31
LINC00839-201ENST00000424751 MYH13Q9UKX3 1938 aa16.99■□□□□ 0.31
LINC00839-201ENST00000424751 ZNF532Q9HCE3 1301 aa16.98■□□□□ 0.31
LINC00839-201ENST00000424751 CHRNA5P30532 468 aa16.98■□□□□ 0.31
LINC00839-201ENST00000424751 GRIK5Q16478 980 aa16.98■□□□□ 0.31
LINC00839-201ENST00000424751 ANKIB1Q9P2G1 1089 aa16.98■□□□□ 0.31
LINC00839-201ENST00000424751 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
LINC00839-201ENST00000424751 LAMA4Q16363 1823 aa16.98■□□□□ 0.31
LINC00839-201ENST00000424751 ZNF804BA4D1E1 1349 aa16.98■□□□□ 0.31
LINC00839-201ENST00000424751 TCRBV5S4A2TA0A5A2 114 aa16.98■□□□□ 0.31
LINC00839-201ENST00000424751 SMIM22K7EJ46 135 aa16.98■□□□□ 0.31
LINC00839-201ENST00000424751 KCNJ4P48050 445 aa16.98■□□□□ 0.31
LINC00839-201ENST00000424751 STOX1Q6ZVD7 989 aa16.98■□□□□ 0.31
LINC00839-201ENST00000424751 MTERF4Q7Z6M4 381 aaKnown RBP16.98■□□□□ 0.31
LINC00839-201ENST00000424751 NLGN1Q8N2Q7 840 aa16.98■□□□□ 0.31
LINC00839-201ENST00000424751 DENND2AQ9ULE3 1009 aa16.98■□□□□ 0.31
LINC00839-201ENST00000424751 CHD4Q14839 1912 aa16.98■□□□□ 0.31
LINC00839-201ENST00000424751 PDE6AP16499 860 aa16.97■□□□□ 0.31
LINC00839-201ENST00000424751 ZGPATQ8N5A5 531 aaKnown RBP16.97■□□□□ 0.31
LINC00839-201ENST00000424751 MAGEB6Q8N7X4 407 aa16.97■□□□□ 0.31
LINC00839-201ENST00000424751 NSFL1CQ9UNZ2 370 aaKnown RBP16.97■□□□□ 0.31
LINC00839-201ENST00000424751 HIP1O00291 1037 aa16.96■□□□□ 0.31
LINC00839-201ENST00000424751 HSPD1P10809 573 aaKnown RBP16.96■□□□□ 0.31
LINC00839-201ENST00000424751 CASTP20810 708 aaKnown RBP16.96■□□□□ 0.31
LINC00839-201ENST00000424751 ADD2P35612 726 aa16.96■□□□□ 0.31
LINC00839-201ENST00000424751 UBE4AQ14139 1066 aa16.96■□□□□ 0.31
LINC00839-201ENST00000424751 ZNF512BQ96KM6 892 aaPredicted RBP16.96■□□□□ 0.31
LINC00839-201ENST00000424751 JAKMIP1Q96N16 626 aaKnown RBP16.96■□□□□ 0.31
LINC00839-201ENST00000424751 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.96■□□□□ 0.31
LINC00839-201ENST00000424751 ZDHHC9Q9Y397 364 aa16.96■□□□□ 0.31
LINC00839-201ENST00000424751 LARGE1O95461 756 aa16.96■□□□□ 0.31
LINC00839-201ENST00000424751 CYP21A2P08686 494 aa16.96■□□□□ 0.31
LINC00839-201ENST00000424751 MCM2P49736 904 aa16.96■□□□□ 0.31
LINC00839-201ENST00000424751 HAND2P61296 217 aa16.96■□□□□ 0.31
LINC00839-201ENST00000424751 CHAF1AQ13111 956 aaPredicted RBP16.96■□□□□ 0.31
LINC00839-201ENST00000424751 STK32BQ9NY57 414 aa16.96■□□□□ 0.31
LINC00839-201ENST00000424751 ABCF2Q9UG63 623 aa16.96■□□□□ 0.31
LINC00839-201ENST00000424751 POLLQ9UGP5 575 aa16.96■□□□□ 0.31
LINC00839-201ENST00000424751 FBXO33Q7Z6M2 555 aa16.95■□□□□ 0.3
LINC00839-201ENST00000424751 MIGA1Q8NAN2 632 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms